Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-315I20.1 Gene 0 9.53 9.30 4.33 3.85 10.33 5.03 9.67 4.28 2.24 3.47 3.60 5.30 2.76 4.58 4.87 7.05 4.69 4.32 5.93 4.40 4.77 4.59 7.96 2 447686 Transcript 0 2.52 1.17 0.99 0.68 0.21 1.83 3.62 0.73 0.62 1.15 0.00 0.00 0.00 0.00 0.89 0.00 1.65 1.93 0.00 0.00 0.00 2.08 1.02 3 412239 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 437797 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 448561 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 3.67 6 421764 Transcript 0 1.82 3.94 0.48 1.08 1.41 0.47 5.02 2.35 0.23 1.26 0.95 3.69 0.00 0.00 0.23 1.49 0.00 0.29 0.00 0.55 3.31 0.23 2.38 7 437207 Transcript 0 2.75 2.25 0.75 1.55 4.94 3.05 2.20 0.45 0.71 0.95 0.00 0.00 0.05 0.25 0.94 0.55 0.61 0.53 0.59 1.97 0.84 0.77 1.09 8 366105 Transcript 0 9.67 10.06 1.89 1.35 9.86 4.61 9.36 3.24 1.77 2.27 3.71 7.06 4.01 7.16 6.77 8.34 5.33 2.64 8.24 4.23 5.35 4.91 8.68 9 ER1a ExonRegion 0 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.16 0.00 0.00 0.00 0.00 0.00 10 E1_Ab KnownBoundary 0 21.93 38.61 246.15 161.48 48.30 21.35 27.78 180.15 194.70 315.39 604.57 64.52 30.68 259.99 266.52 129.62 605.80 201.17 180.62 328.21 305.92 107.10 42.60 11 ER1b ExonRegion 0 0.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 2.29 0.00 0.00 0.00 0.00 12 E1_Da NovelBoundary 0 17.56 15.19 50.80 40.05 11.63 13.57 7.73 16.76 26.94 19.18 8.00 6.30 12.82 57.98 45.24 51.44 16.92 75.98 55.15 36.30 20.45 29.02 43.45 13 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E2_Aa NovelBoundary 0 43.27 14.14 45.59 32.40 34.04 16.47 45.75 29.20 34.32 33.63 96.76 53.12 65.74 129.91 183.94 118.60 135.58 46.39 141.27 66.60 66.10 56.58 26.21 15 ER2a ExonRegion 0 5.54 3.44 5.11 1.27 3.44 0.00 4.41 3.17 1.29 1.31 3.41 0.41 0.00 2.82 0.69 1.20 3.14 1.80 2.65 0.00 4.56 5.85 1.68 16 E2_Ab KnownBoundary 0 7.11 6.31 14.64 3.96 11.63 0.00 10.95 4.81 2.92 2.82 2.63 0.00 0.00 0.00 4.45 3.50 0.00 2.57 4.52 0.00 14.64 16.59 3.76 17 ER2b ExonRegion 0 2.34 3.71 5.55 3.72 4.09 1.22 5.90 3.56 2.32 3.06 4.48 1.05 0.00 3.67 2.07 4.03 2.56 6.48 3.71 1.21 3.80 2.90 3.15 18 E2_Da KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 2.90 2.25 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E2_Ac KnownBoundary 0 3.33 3.29 0.00 0.00 0.00 5.79 2.21 0.00 0.00 1.16 0.00 0.00 0.00 0.00 0.00 0.00 4.77 2.57 0.00 0.00 0.00 8.14 3.33 22 ER2c ExonRegion 0 2.93 2.35 1.98 1.36 0.41 3.67 7.23 1.46 1.24 2.29 0.00 0.00 0.00 0.00 1.79 0.00 3.30 3.70 0.00 0.00 0.00 4.17 2.03 23 ER2d ExonRegion 0 2.75 0.45 2.24 1.10 3.36 2.12 1.17 2.17 1.27 1.62 0.48 3.01 0.00 0.56 1.68 2.38 2.16 4.11 0.00 1.42 3.72 1.62 5.10 24 E2_Ad KnownBoundary 0 10.67 0.00 1.30 0.00 3.40 0.00 0.00 0.00 1.71 0.00 2.68 0.00 0.00 0.00 0.00 7.78 0.00 4.10 0.00 3.26 0.00 3.12 3.67 25 ER2e ExonRegion 0 21.28 5.16 2.54 4.64 21.11 17.29 10.22 1.73 2.38 0.00 0.89 0.00 0.00 2.53 4.62 11.17 2.75 2.74 0.00 6.86 4.04 5.63 6.04 26 E2_Db KnownBoundary 0 32.75 13.35 5.38 11.25 40.66 36.51 29.63 4.35 3.07 0.00 0.00 0.00 0.00 0.00 8.90 0.00 0.00 2.57 0.00 11.19 11.86 3.06 8.45 27 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 3.67 28 ER2f ExonRegion 0 10.82 23.40 9.14 9.66 21.54 9.98 30.02 7.00 2.33 5.88 4.82 7.95 0.00 2.65 3.34 11.06 4.26 1.57 10.28 10.18 6.58 1.85 12.19 29 E2_Dc KnownBoundary 0 0.00 16.31 3.87 5.79 3.48 5.22 7.77 8.54 1.53 8.97 4.32 12.60 0.00 0.00 0.00 3.67 0.00 2.03 0.00 3.26 7.72 2.69 0.00 30 ER2g ExonRegion 0 3.65 7.89 0.95 2.16 2.81 0.95 10.04 4.71 0.47 2.51 1.90 7.39 0.00 0.00 0.45 2.97 0.00 0.57 0.00 1.10 6.61 0.47 4.76 31 E2_Dd NovelBoundary 0 3.04 5.92 4.08 7.39 8.57 16.69 2.25 12.86 1.79 0.00 2.42 6.15 0.00 2.47 0.00 0.00 8.51 5.84 0.00 8.63 8.22 5.94 3.33 32 E2d_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 I2_AR1 ActiveIntronRegion 0 5.57 2.86 3.68 10.74 17.90 12.74 13.61 5.07 2.17 5.48 3.01 34.38 0.00 4.02 2.46 6.98 2.22 5.51 5.24 6.26 2.83 2.80 11.50 34 E3_Aa NovelBoundary 0 3.63 3.29 7.78 8.12 23.01 0.00 6.01 4.23 6.13 2.87 0.00 18.76 0.00 0.00 0.00 11.11 4.58 8.46 4.61 3.13 3.15 26.27 24.16 35 ER3a ExonRegion 0 2.87 2.65 0.40 0.34 7.39 1.23 3.75 0.00 0.07 0.23 1.27 4.39 0.00 0.88 4.47 2.23 4.43 1.31 0.00 2.77 0.00 1.29 8.27 36 E3_Da NovelBoundary 0 747.17 702.37 1783.79 1915.21 485.57 459.28 686.51 2050.13 1848.71 1680.40 225.32 170.01 178.40 113.96 211.51 631.20 481.07 2419.51 478.98 613.16 292.95 422.14 724.90 37 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 E4_Aa NovelBoundary 0 15.56 2.63 39.09 24.37 15.37 12.95 6.45 43.74 11.34 11.28 2.11 0.00 6.33 12.30 10.01 10.94 18.98 3.52 16.85 2.49 6.30 10.90 4.01 39 E4_Ab NovelBoundary 0 33.64 24.60 21.52 16.35 46.86 13.23 10.95 12.12 6.42 6.58 2.58 12.60 6.82 2.41 4.45 0.00 4.77 13.47 8.47 5.43 3.15 0.00 12.38 40 ER4a ExonRegion 0 18.30 12.32 9.80 12.19 5.98 9.06 8.10 7.32 2.76 4.72 2.84 0.51 2.76 4.20 3.75 2.10 1.55 4.13 6.93 5.13 0.13 2.33 8.29 41 ER4b ExonRegion 0 34.58 23.69 17.12 20.10 22.39 11.35 14.06 17.54 6.01 16.33 4.52 12.54 10.14 10.17 4.65 13.68 12.86 11.90 7.82 12.86 0.55 15.66 20.60 42 E4_Ac KnownBoundary 0 14.22 15.52 11.74 10.99 12.39 2.10 5.56 9.24 6.68 14.42 2.63 7.50 0.00 0.00 0.00 11.36 9.07 10.16 0.00 9.20 0.00 5.51 10.93 43 E4_Dc NovelBoundary 0 10.45 18.35 22.44 19.51 50.17 8.69 13.56 24.85 20.08 6.04 12.95 19.21 6.82 6.89 4.45 11.19 18.14 2.40 12.99 9.72 6.18 6.00 0.00 44 E4c_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E4c_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER4c ExonRegion 0 10.58 13.36 8.93 9.93 6.12 1.31 4.35 9.63 4.41 11.96 1.93 4.33 23.45 0.23 5.80 8.92 6.60 6.34 0.00 6.38 2.20 4.17 7.97 47 ER4d ExonRegion 0 10.58 10.85 8.58 6.81 5.35 0.00 3.97 4.03 3.71 5.35 1.93 4.33 23.45 0.00 5.80 5.94 6.60 5.54 0.00 6.38 2.20 2.08 5.87 48 ER4e ExonRegion 0 7.46 6.10 6.13 2.99 4.33 0.00 0.57 2.72 2.59 4.15 0.74 2.68 18.98 1.24 3.87 1.56 3.14 3.87 0.15 3.24 2.73 1.89 0.98 49 E5_Aa NovelBoundary 0 52.82 42.16 24.72 26.94 130.65 78.02 153.11 31.05 26.85 23.77 20.37 11.70 27.43 28.08 40.42 39.39 50.96 14.43 20.71 61.87 35.65 8.27 24.33 50 ER5a ExonRegion 0 19.33 20.11 3.78 2.70 19.72 9.21 18.71 6.47 3.54 4.54 7.43 14.12 8.02 11.91 13.54 16.69 10.66 5.29 16.47 8.47 10.71 9.83 17.36 51 E5_Da NovelBoundary 0 2.74 40.12 12.42 18.65 4.33 0.00 15.02 20.13 5.99 13.83 8.90 12.60 6.82 9.24 4.45 15.47 4.77 2.57 8.38 11.76 0.00 5.45 20.15 52 E6_Aa NovelBoundary 0 12.74 2.83 3.28 26.20 20.12 2.44 11.84 4.31 5.90 3.89 1.95 0.00 0.00 0.00 4.45 4.36 4.11 5.97 0.00 5.24 2.97 0.00 0.00 53 ER6a ExonRegion 0 8.24 6.76 2.00 4.52 14.83 9.15 6.61 1.35 2.09 2.84 0.00 0.00 0.15 0.74 2.81 1.65 1.83 1.59 1.77 5.90 2.52 2.31 3.26 54 ER7a ExonRegion 0 0.00 0.00 0.25 0.14 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00