Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-458D21.2 Gene 0 1.73 14.20 2.14 10.62 22.55 61.51 23.61 14.88 33.74 36.62 0.45 2.32 1.42 0.69 0.16 0.35 1.29 12.98 12.55 24.82 3.86 1.71 2.29 2 433081 Transcript 0 0.80 10.74 1.16 2.38 30.60 54.06 37.39 5.75 10.15 17.67 0.17 0.07 0.93 0.00 0.00 0.00 0.00 5.07 9.45 15.06 2.98 2.17 0.65 3 419817 Transcript 0 1.52 9.34 0.92 9.86 8.36 85.58 11.46 7.80 15.25 17.00 2.37 0.00 0.00 0.00 0.00 1.92 0.00 5.43 3.62 7.83 2.66 0.00 3.88 4 457465 Transcript 0 0.43 2.47 1.09 1.99 3.25 2.61 1.04 2.09 8.57 6.89 0.00 0.00 0.00 0.27 0.00 0.00 0.00 7.62 2.58 6.89 0.89 0.00 0.59 5 452883 Transcript 0 0.00 0.48 0.49 1.42 0.00 6.05 0.22 0.38 1.10 0.59 0.00 0.00 0.00 0.32 0.00 0.00 0.00 0.00 0.00 0.50 1.26 0.00 0.00 6 ER1a ExonRegion 0 0.47 8.13 0.10 2.54 21.85 54.10 43.21 2.69 4.97 1.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 20.17 10.64 5.57 1.39 1.96 7 E1_Ab KnownBoundary 0 2.82 18.42 1.83 8.19 79.54 125.95 122.77 7.56 18.20 4.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.63 54.12 28.25 12.23 3.12 4.35 8 ER1b ExonRegion 0 1.04 7.54 1.56 6.26 31.65 57.78 39.61 9.67 23.02 22.25 0.00 3.82 0.64 1.11 0.05 0.00 0.04 14.60 25.45 19.70 3.60 1.35 2.71 9 E1_Da NovelBoundary 0 10.96 6.12 17.56 8.76 31.92 26.46 30.47 29.94 40.05 29.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.01 4.71 26.59 3.15 0.00 7.68 10 E1a_E3a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 62.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1a_E4a KnownJunction 0 0.00 2.63 1.83 1.90 0.00 35.66 11.22 1.89 3.33 5.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.48 3.76 0.00 2.59 0.00 0.00 12 E1a_E5a KnownJunction 0 0.00 11.77 3.37 0.00 54.58 58.72 56.93 9.65 12.33 36.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.60 0.00 20.77 2.47 3.12 0.00 13 I1 Intron 0 1.28 12.45 2.29 6.36 9.00 20.80 10.32 7.41 20.36 18.43 0.58 0.58 0.82 0.62 0.35 0.48 1.84 16.70 6.80 16.53 2.35 0.68 1.97 14 I1_SR1 SilentIntronRegion 0 1.28 12.46 2.29 6.37 9.01 20.81 10.33 7.41 20.38 18.45 0.58 0.58 0.82 0.62 0.35 0.48 1.84 16.72 6.80 16.55 2.35 0.68 1.98 15 E2_Aa NovelBoundary 0 3.70 9.21 6.33 23.81 3.99 45.43 6.05 8.95 43.55 40.48 0.00 0.00 0.00 0.00 0.00 4.36 0.00 24.91 0.00 15.72 5.50 0.00 4.35 16 ER2a ExonRegion 0 0.86 4.94 2.19 3.98 6.50 5.21 2.08 4.17 17.13 13.78 0.00 0.00 0.00 0.54 0.00 0.00 0.00 15.24 5.16 13.78 1.78 0.00 1.19 17 E2_Da NovelBoundary 0 6.82 24.93 4.97 19.51 15.03 39.81 12.94 14.54 43.34 46.79 0.00 6.00 0.00 0.00 0.00 3.85 4.02 69.48 15.72 23.78 0.00 0.00 4.35 18 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E3_Aa NovelBoundary 0 0.00 9.08 3.05 6.03 8.66 60.25 4.06 10.84 42.01 13.32 2.26 0.00 7.14 0.00 0.00 0.00 0.00 27.32 9.60 42.06 8.34 5.76 3.76 20 ER3a ExonRegion 0 0.00 1.44 0.00 2.29 0.00 18.16 0.66 1.13 3.31 1.77 0.00 0.00 0.00 0.95 0.00 0.00 0.00 0.00 0.00 1.51 1.25 0.00 0.00 21 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 22 E4_Aa NovelBoundary 0 0.00 19.86 1.83 2.06 0.00 37.42 4.37 5.05 5.32 14.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.25 22.75 2.78 0.00 0.00 23 ER4a ExonRegion 0 0.39 3.37 1.26 6.86 2.85 32.80 5.34 11.00 22.63 21.56 0.00 0.00 0.00 0.00 0.37 0.00 2.48 6.81 6.46 11.31 2.26 0.43 1.83 24 E4_Da KnownBoundary 0 7.33 20.26 13.42 28.73 25.30 73.59 19.70 41.90 42.74 47.30 2.21 0.00 0.00 0.00 0.00 0.00 8.70 12.19 9.41 23.97 6.30 0.00 0.00 25 ER4b ExonRegion 0 1.77 9.09 1.03 15.19 13.49 95.36 14.21 13.40 25.11 26.12 1.10 0.00 0.00 0.00 0.00 0.85 1.01 4.94 8.91 15.68 1.62 0.00 1.74 26 E4_Db NovelBoundary 0 0.00 6.71 2.90 3.86 12.39 24.02 14.66 4.76 14.70 12.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.06 4.33 21.03 2.47 0.00 0.00 27 E4b_E5a KnownJunction 0 3.04 16.05 0.00 17.81 16.72 135.49 11.70 13.72 27.17 28.15 4.74 0.00 0.00 0.00 0.00 3.85 0.00 6.38 3.48 15.66 2.72 0.00 7.77 28 E4b_E6a KnownJunction 0 0.00 0.00 1.48 1.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER5a ExonRegion 0 5.60 47.65 5.63 26.76 47.03 147.93 51.57 27.66 77.05 84.22 2.21 2.70 7.11 0.46 0.00 1.80 3.06 14.03 11.82 58.82 6.98 4.29 5.85 30 E5_Da NovelBoundary 0 3.48 36.31 8.01 39.95 24.70 44.86 21.42 22.26 44.53 41.88 0.00 0.00 15.75 0.00 0.00 0.00 0.00 8.75 4.61 28.57 3.15 2.88 4.18 31 E5a_E6a KnownJunction 0 7.56 57.36 3.52 20.14 115.28 256.61 94.15 25.38 57.84 105.73 0.00 0.00 0.00 0.00 0.00 0.00 4.11 20.15 13.65 70.18 5.87 0.00 4.18 32 E6_Aa NovelBoundary 0 13.11 9.93 1.60 12.02 23.09 61.39 22.04 4.07 13.25 12.17 0.00 0.00 14.77 0.00 0.00 0.00 4.68 5.97 18.73 16.11 3.15 6.00 4.18 33 ER6a ExonRegion 0 1.31 22.32 3.91 18.51 38.15 88.58 27.73 36.28 64.94 82.25 0.21 5.37 0.58 1.57 0.86 1.20 1.77 23.00 12.90 50.54 6.06 2.82 2.72 34 E6_Da KnownBoundary 0 26.75 107.68 13.51 52.87 138.46 374.33 92.83 60.71 150.23 104.98 6.42 17.71 6.82 2.24 0.00 8.72 13.46 37.97 27.48 88.27 21.13 24.92 16.13 35 ER6b ExonRegion 0 3.55 22.74 2.28 14.72 28.45 70.12 20.68 23.15 48.66 58.93 1.01 4.98 2.55 1.00 0.00 0.00 2.10 20.95 9.66 32.38 6.14 3.72 1.32 36 E6_Db KnownBoundary 0 42.67 118.66 24.01 63.10 60.02 398.58 153.42 64.08 163.92 106.86 7.37 0.00 13.64 2.47 0.00 0.00 8.88 57.37 62.21 113.84 35.03 16.72 11.52 37 ER6c ExonRegion 0 1.91 12.30 0.00 4.61 15.35 49.38 12.04 4.90 13.15 14.36 0.51 0.21 2.79 0.00 0.00 0.00 0.00 8.09 8.19 13.78 0.89 1.98 0.00