Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-14N7.2 Gene 0 36.00 41.90 105.78 124.48 125.82 116.83 160.73 76.92 101.90 90.34 0.63 4.94 9.31 9.75 12.41 4.64 2.82 81.12 105.17 71.44 98.47 45.02 54.88 2 420597 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 452399 Transcript 0 3.24 1.79 65.10 50.45 5.84 19.45 25.65 37.25 55.76 55.21 0.00 0.00 0.00 3.48 27.30 0.91 0.24 46.43 53.28 8.97 114.14 84.79 31.53 4 294715 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 431263 Transcript 0 14.09 18.27 38.44 44.66 48.93 29.19 62.10 29.37 37.26 34.78 0.00 2.09 4.61 3.43 3.41 0.63 0.23 23.25 37.24 32.04 17.42 12.58 16.41 6 457390 Transcript 0 35.13 36.88 92.03 114.60 184.87 286.51 230.99 58.99 82.76 58.56 2.57 4.31 6.83 8.45 13.72 12.16 9.23 127.06 124.46 49.59 126.43 20.86 65.24 7 ER1a ExonRegion 0 63.71 32.94 22.91 38.02 64.22 157.16 119.02 9.33 26.18 21.91 0.00 0.00 0.00 1.79 4.93 1.49 0.00 59.31 43.32 22.77 115.92 50.84 78.70 8 ER1b ExonRegion 0 187.74 101.75 93.92 127.86 314.80 729.95 514.21 64.11 115.62 94.83 0.00 0.00 0.00 15.43 32.56 18.82 5.99 258.96 281.31 81.17 455.56 126.40 286.98 9 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.00 0.00 1.61 0.00 0.00 1.62 1.57 0.05 1.63 1.51 0.00 0.00 0.00 0.00 1.81 0.00 0.00 0.00 1.01 0.02 2.60 0.61 0.00 11 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 41.27 22.37 63.11 79.05 151.18 333.75 246.26 47.53 81.52 59.64 0.00 0.00 0.00 1.62 2.90 5.94 3.30 147.82 108.30 21.28 197.23 21.88 67.54 13 ER3b ExonRegion 0 17.94 12.44 102.62 124.06 60.32 120.22 88.91 75.74 138.26 105.99 0.00 3.30 0.00 8.51 14.77 2.55 2.04 100.88 66.82 31.14 399.66 78.19 46.83 14 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E3a_E5a KnownJunction 1 0.00 0.00 64.87 38.76 0.00 10.22 14.18 32.69 50.81 52.19 0.00 0.00 0.00 4.71 47.10 0.00 0.00 44.44 69.84 9.65 157.53 121.36 39.86 16 E3a_E6a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 1.79 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.59 0.00 0.00 17 ER4a ExonRegion 0 2.09 5.08 92.67 122.90 11.42 11.19 8.96 69.71 76.91 64.61 0.00 3.55 0.00 13.01 13.73 3.96 3.05 74.17 105.44 44.00 70.97 40.52 47.78 18 E4_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E4a_E6a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4b ExonRegion 0 28.99 51.39 120.96 150.16 218.56 239.26 215.72 70.45 84.01 57.48 5.14 8.62 13.67 15.27 24.54 18.38 15.16 106.30 140.61 77.91 55.63 19.85 62.94 21 E4_Db NovelBoundary 0 67.94 92.22 44.14 72.78 108.66 75.01 111.03 27.44 40.74 44.24 0.00 11.25 36.04 26.08 29.30 41.87 32.73 56.21 201.42 52.16 10.19 34.84 69.49 22 I4 Intron 0 6.87 7.79 44.02 66.26 41.61 31.20 39.57 32.43 36.40 31.32 0.00 0.09 1.12 0.48 0.59 0.13 0.00 18.77 25.80 8.27 27.42 9.33 15.24 23 I4_SR1 SilentIntronRegion 0 8.14 11.24 51.36 93.52 54.54 35.87 48.20 44.89 46.23 39.64 0.00 0.15 3.14 0.67 1.06 0.31 0.00 7.30 16.66 11.59 4.16 8.18 8.48 24 I4_AR1 ActiveIntronRegion 0 17.25 14.85 80.81 210.84 124.02 80.41 106.25 63.78 57.31 63.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.35 24.37 9.89 12.89 22.19 11.16 25 I4_AR2 ActiveIntronRegion 0 11.43 11.09 35.48 90.40 47.28 37.74 46.42 32.91 33.71 26.14 0.00 0.00 0.00 0.56 0.00 0.00 0.00 3.68 9.61 7.29 10.63 9.12 6.72 26 I4_SR2 SilentIntronRegion 0 3.85 6.68 27.37 41.23 35.62 17.24 33.22 15.45 16.70 14.36 0.00 0.00 1.00 0.14 0.41 0.00 0.00 7.36 15.42 3.87 9.73 6.72 10.53 27 I4_AR3 ActiveIntronRegion 0 2.93 3.87 54.62 84.24 30.57 24.59 31.44 31.16 25.79 33.61 0.00 0.00 0.00 0.55 0.00 0.00 0.00 7.25 10.48 5.00 7.61 6.58 6.49 28 I4_SR3 SilentIntronRegion 0 8.86 8.90 51.81 66.03 46.96 30.93 38.09 35.20 38.50 31.68 0.00 0.10 0.90 0.76 0.81 0.21 0.00 24.49 30.65 8.26 31.10 7.60 18.79 29 I4_SR4 SilentIntronRegion 0 4.57 3.71 36.18 44.97 26.01 35.96 37.40 27.56 40.13 34.44 0.00 0.12 0.13 0.09 0.25 0.00 0.00 36.18 42.69 9.05 66.04 15.33 24.38 30 ER5a ExonRegion 0 6.48 3.58 65.34 62.15 11.68 28.67 37.12 41.81 60.71 58.23 0.00 0.00 0.00 2.26 7.49 1.82 0.48 48.42 36.71 8.29 70.74 48.22 23.19 31 E5_Da NovelBoundary 0 33.64 49.27 159.46 296.43 214.01 133.33 308.65 128.11 157.15 120.61 0.00 0.00 20.13 29.08 23.86 12.39 0.00 205.19 219.96 179.80 96.43 43.84 100.30 32 E6_Aa NovelBoundary 0 58.83 189.11 200.02 192.18 166.13 102.33 234.72 106.42 153.59 122.06 0.00 6.30 12.66 4.94 8.90 0.00 0.00 126.97 131.11 145.48 114.72 27.25 83.14 33 ER6a ExonRegion 0 56.37 73.06 150.31 178.64 195.74 115.15 246.82 117.45 147.41 137.63 0.00 8.38 18.43 13.70 11.82 2.54 0.94 93.02 147.96 128.12 67.07 49.72 65.65