Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NOTCH2NL Gene 0 22.80 1.72 4.12 4.65 11.91 6.54 12.24 8.96 8.31 5.00 3.82 9.57 16.97 1.30 0.56 3.49 19.17 0.78 0.82 4.32 27.73 28.47 33.42 2 362074 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 344859 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 454606 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 369340 Transcript 0 0.00 0.00 0.00 1.36 0.00 0.00 1.32 0.00 1.24 0.00 0.00 4.33 0.00 0.00 0.00 0.00 3.30 0.00 0.00 0.00 0.00 2.08 2.94 6 320929 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.00 0.00 0.00 0.00 0.00 0.00 7 IG29_AR4 ActiveIntergenicRegion 0 14.26 0.37 0.00 0.55 4.04 0.00 1.07 0.69 0.76 0.31 0.00 0.00 0.00 0.00 0.00 0.00 0.89 0.00 0.00 0.00 4.93 0.37 1.85 8 IG29_AR6 ActiveIntergenicRegion 0 23.51 0.00 0.00 0.65 5.97 0.00 0.00 0.82 0.00 0.00 0.00 0.00 1.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 IG29_SR7 SilentIntergenicRegion 0 13.55 0.00 0.42 0.93 2.45 0.00 0.61 0.00 0.00 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.49 0.50 0.48 0.67 10 ER1a ExonRegion 0 0.34 0.00 0.00 0.00 0.00 0.00 0.73 0.00 0.00 0.00 0.93 0.00 0.00 1.01 0.00 0.95 0.00 0.00 0.00 0.00 2.83 5.01 6.71 11 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2b ExonRegion 0 1.05 0.00 0.00 0.00 1.32 0.00 2.62 1.28 0.91 0.00 0.00 2.14 11.79 0.00 0.00 0.00 3.27 0.00 0.00 0.02 0.00 0.00 4.31 14 E2_Da NovelBoundary 0 0.00 0.00 7.75 3.20 3.82 0.00 11.26 0.00 5.79 0.00 2.16 6.30 12.66 0.00 0.00 0.00 20.76 0.00 0.00 2.94 3.15 2.69 12.04 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3_Aa NovelBoundary 0 16.89 0.00 4.94 0.00 8.40 0.00 8.61 4.03 5.01 3.33 0.00 0.00 13.15 0.00 0.00 3.42 16.74 0.00 0.00 0.00 6.05 0.00 22.11 17 ER3a ExonRegion 0 17.36 0.00 15.73 0.70 4.61 0.95 4.56 3.11 1.59 0.88 2.33 6.48 5.26 0.46 0.00 1.02 8.53 0.00 0.55 1.09 8.11 3.61 25.61 18 E3_Da NovelBoundary 0 14.08 0.00 11.53 0.00 7.98 0.00 8.57 1.64 0.00 1.21 2.68 6.30 7.14 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 4.35 19 E3a_E4a KnownJunction 0 6.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.12 0.00 4.35 20 ER4a ExonRegion 0 2.66 0.00 0.00 0.00 0.00 0.00 0.45 0.00 0.00 0.00 0.00 0.21 0.00 0.00 0.00 0.00 1.37 0.00 0.00 0.00 6.32 1.83 3.94 21 E4a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.00 0.00 0.00 0.00 0.00 24 ER7a ExonRegion 0 8.89 0.00 0.00 0.00 0.00 0.23 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.85 0.00 0.00 0.00 2.16 0.22 1.15 25 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER8a ExonRegion 0 8.74 0.31 2.51 3.69 4.23 4.87 7.53 4.39 5.26 1.57 3.98 3.72 2.00 0.81 0.00 5.28 18.96 1.09 0.00 2.68 38.50 25.49 29.35 27 E8a_E9a KnownJunction 0 13.34 0.00 4.20 11.25 24.87 15.16 13.78 4.11 12.64 3.14 4.47 0.00 0.00 0.00 0.00 12.65 35.16 4.27 0.00 6.07 92.36 67.30 38.33 28 E8a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E9_Aa NovelBoundary 0 25.63 0.00 2.84 4.93 6.62 0.00 4.02 7.06 1.16 1.48 2.53 6.30 15.10 0.00 0.00 4.27 22.91 0.00 0.00 3.26 22.92 11.88 52.93 30 ER9a ExonRegion 0 17.65 0.50 1.89 2.68 10.55 5.09 10.69 7.03 7.61 3.08 3.78 13.25 9.77 1.36 0.54 3.93 26.66 1.55 0.74 4.91 43.44 41.31 47.14 31 E9_Da KnownBoundary 0 7.56 2.70 2.66 1.83 7.64 7.15 10.02 6.04 21.30 6.21 5.37 12.75 12.82 2.47 6.30 4.36 18.14 1.53 0.00 14.45 21.37 48.44 23.82 32 ER9b ExonRegion 0 13.26 0.26 2.12 2.80 6.06 2.54 7.02 7.28 6.62 3.11 1.79 7.63 13.50 0.29 0.33 1.84 10.76 0.31 0.16 2.13 14.01 20.88 20.02 33 E9_Db NovelBoundary 0 45.49 0.00 4.55 4.73 0.00 0.00 8.48 11.71 0.00 0.00 0.00 6.30 0.00 0.00 0.00 4.10 15.99 0.00 0.00 0.00 2.78 22.17 19.04 34 E9_Dc NovelBoundary 0 22.15 0.00 1.30 0.00 12.14 0.00 11.57 15.77 7.75 2.34 0.00 0.00 6.17 0.00 0.00 4.36 15.99 0.00 0.00 0.00 13.41 20.02 29.96 35 ER9c ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 1.32 0.00 1.24 0.00 0.00 4.33 0.00 0.00 0.00 0.00 3.30 0.00 0.00 0.00 0.00 2.08 2.94 36 Ix_AR1 ActiveIntronRegion 0 149.43 2.06 9.13 16.48 33.71 9.01 23.37 33.26 25.06 13.53 10.21 14.23 30.31 1.84 2.02 15.40 68.35 5.28 1.98 17.05 62.44 53.87 110.57 37 Ix_SR1 SilentIntronRegion 0 113.99 2.03 22.67 16.26 29.82 25.80 35.75 38.89 37.49 15.16 5.94 14.23 8.38 0.70 0.00 26.75 88.42 4.22 0.00 19.60 93.97 41.37 105.72 38 Ix_SR2 SilentIntronRegion 0 176.50 2.56 17.87 8.10 40.28 13.98 32.04 18.80 7.21 9.05 8.91 4.86 5.45 0.92 5.06 4.46 49.65 1.60 1.51 4.97 52.44 29.56 94.05 39 Ix_AR3 ActiveIntronRegion 0 69.14 3.13 13.82 8.53 17.98 4.66 6.69 11.48 5.57 7.38 5.85 1.11 15.87 0.00 0.00 3.20 18.03 0.57 1.31 4.42 41.64 17.47 51.88 40 Ix Intron 0 143.18 1.62 35.23 20.39 44.54 19.63 29.91 28.93 21.16 12.65 13.79 11.98 27.46 3.75 2.01 15.71 66.30 8.99 3.37 11.24 162.14 35.24 120.28 41 Ix_AR1 ActiveIntronRegion 0 143.54 1.62 35.32 20.45 44.66 19.68 29.99 29.00 21.21 12.68 13.83 12.01 27.53 3.76 2.01 15.75 66.46 9.01 3.38 11.27 162.55 35.33 120.59 42 ER10a ExonRegion 0 35.70 0.00 0.04 0.00 4.96 1.77 7.29 3.12 2.04 1.13 2.21 0.89 1.92 0.00 0.00 2.04 16.23 0.00 0.00 1.95 28.28 20.78 17.51 43 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 Ix Intron 0 71.83 2.31 17.66 13.86 37.03 12.17 24.60 22.46 12.91 3.89 9.53 11.40 35.15 0.72 0.00 14.09 52.58 1.39 0.60 14.12 131.96 35.95 110.24 45 Ix_AR1 ActiveIntronRegion 0 43.93 1.14 9.24 8.31 16.32 9.71 15.05 7.00 1.69 2.88 5.47 8.24 42.44 0.00 0.00 4.64 18.52 0.00 0.00 7.11 54.61 25.71 65.18 46 Ix_SR1 SilentIntronRegion 0 109.05 2.10 25.39 19.63 51.13 10.25 33.89 30.08 18.45 5.10 15.14 9.42 37.44 0.08 0.00 19.51 70.46 1.18 0.86 18.47 154.70 45.15 157.62 47 Ix_AR2 ActiveIntronRegion 0 42.45 3.04 12.61 9.83 29.98 15.48 18.37 20.34 11.29 2.99 5.02 15.01 30.33 1.73 0.00 11.94 46.74 2.19 0.57 12.23 138.73 30.30 76.85 48 ER11a ExonRegion 0 85.38 10.91 14.26 19.55 50.72 31.03 47.52 29.16 26.54 21.23 14.77 25.31 61.75 6.24 2.37 11.96 62.05 2.63 4.46 17.38 85.91 76.63 99.58