Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IGSF2 Gene 0 8.72 6.98 8.83 4.39 6.22 3.52 7.23 3.93 5.52 3.86 21.96 2.47 45.80 51.30 24.25 4.10 53.29 10.61 2.41 6.41 1.76 1.38 0.95 2 437666 Transcript 0 0.00 0.00 0.61 0.00 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.69 2.03 0.00 0.00 3.30 0.00 0.00 0.00 0.00 0.00 0.00 3 256652 Transcript 0 1.96 3.18 1.79 1.38 0.70 2.13 4.53 0.23 2.51 0.70 2.41 0.00 9.99 9.04 10.55 0.00 8.80 0.00 0.00 2.59 0.00 0.00 0.00 4 369470 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.06 0.00 4.21 0.00 0.00 0.00 0.00 0.00 0.00 5 467588 Transcript 0 0.00 0.81 0.75 0.97 4.03 0.00 0.20 0.22 0.96 1.25 1.56 0.00 5.63 2.55 8.80 0.00 10.44 0.42 0.48 1.41 0.00 0.00 0.00 6 460180 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 0 3.59 0.08 0.58 0.03 0.00 0.00 4.52 1.47 2.03 1.10 18.67 0.00 1.95 38.89 13.47 5.50 50.01 0.00 0.00 1.28 1.83 0.00 0.00 8 E1_Ab KnownBoundary 0 10.59 0.00 1.63 0.00 0.00 0.00 17.18 6.24 5.47 2.93 53.33 0.00 8.28 78.93 28.31 19.91 166.06 0.00 0.00 3.26 2.41 0.00 0.00 9 ER1b ExonRegion 0 2.78 8.26 1.23 2.90 0.00 0.00 6.84 1.12 4.43 2.15 28.23 0.00 3.42 31.30 18.37 9.72 83.69 4.39 0.00 5.05 0.41 1.39 0.00 10 E1a_E2a KnownJunction 0 0.00 5.26 0.00 5.66 0.00 0.00 2.25 0.00 3.99 1.10 7.69 0.00 6.98 7.18 15.33 0.00 7.67 5.02 0.00 9.46 0.00 3.06 0.00 11 ER2a ExonRegion 0 1.30 3.33 4.80 2.60 4.68 1.47 4.62 2.64 5.38 1.85 22.77 4.07 39.18 46.69 16.52 2.39 54.11 10.49 3.38 7.20 1.17 1.06 1.18 12 E2a_E3a KnownJunction 0 7.56 3.22 1.63 0.00 7.72 0.00 8.88 3.61 4.60 0.00 37.17 6.30 54.87 49.39 14.96 0.00 54.70 7.42 0.00 9.46 0.00 3.12 0.00 13 ER3a ExonRegion 0 1.86 2.92 1.87 1.33 2.93 0.90 3.94 0.99 5.82 3.83 25.39 2.39 44.81 55.28 12.13 2.48 51.82 10.28 5.19 6.00 3.07 1.16 0.36 14 E3a_E4a KnownJunction 1 3.19 9.14 0.00 1.60 7.98 0.00 8.48 1.89 1.13 1.16 29.17 0.00 45.45 55.04 0.00 7.26 51.80 6.01 4.24 10.48 5.44 0.00 0.00 15 ER4a ExonRegion 0 2.98 4.87 5.12 3.98 3.53 1.68 5.97 2.42 5.62 2.46 23.61 1.01 33.67 62.30 19.39 1.64 56.80 8.79 1.99 8.48 1.05 1.22 0.77 16 E4a_E5a KnownJunction 0 6.96 12.43 9.61 8.36 0.00 8.01 0.00 1.56 7.49 0.00 31.38 0.00 33.28 51.98 19.78 3.50 46.75 9.87 0.00 3.00 0.00 3.12 0.00 17 ER5a ExonRegion 0 6.13 7.23 11.89 3.44 4.91 4.11 5.40 4.76 9.37 4.32 29.21 0.41 41.40 59.86 27.52 3.83 49.56 14.44 1.69 9.09 2.93 1.81 2.70 18 E5a_E6a KnownJunction 0 11.26 18.02 8.07 3.63 8.66 5.22 2.12 9.36 16.44 12.54 26.69 0.00 44.80 93.77 31.52 3.85 84.24 7.83 0.00 6.14 6.30 0.00 0.00 19 ER6a ExonRegion 0 8.87 10.73 11.73 5.34 7.90 4.02 8.22 4.93 10.28 4.86 27.75 2.63 77.83 73.42 31.00 7.60 79.13 14.28 2.41 8.58 1.38 1.10 0.80 20 E6a_E7a KnownJunction 1 6.89 18.29 11.74 15.82 3.14 0.00 15.59 6.65 5.96 3.14 6.79 0.00 86.03 51.27 19.41 0.00 26.55 8.29 0.00 5.88 0.00 2.51 0.00 21 ER7a ExonRegion 0 13.63 12.07 10.90 10.46 12.26 7.10 15.41 7.73 5.38 6.93 35.13 4.68 97.32 74.01 30.91 4.55 76.25 9.10 3.48 6.43 1.79 2.49 0.70 22 E7a_E8a KnownJunction 0 23.93 15.66 10.61 4.63 7.56 2.90 5.65 5.87 2.98 1.67 33.01 13.95 41.39 45.32 29.42 10.85 126.79 7.05 3.86 0.00 3.15 2.39 0.00 23 ER8a ExonRegion 0 11.52 4.30 5.17 2.19 4.79 5.04 10.13 1.93 1.55 1.35 9.85 1.74 21.02 27.95 19.99 4.41 36.46 9.49 1.03 2.34 0.70 2.07 1.38 24 E8_Da NovelBoundary 1 0.00 0.00 1.54 0.00 0.00 2.16 1.77 0.00 4.20 1.64 2.68 12.60 66.23 11.48 4.45 0.00 9.54 4.15 0.00 0.00 0.00 0.00 0.00 25 E8a_E10a KnownJunction 0 46.30 15.13 14.04 6.96 29.20 13.46 10.07 8.50 0.00 7.09 16.64 0.00 39.61 45.32 46.60 11.71 65.08 21.97 4.42 5.43 0.00 3.12 4.18 26 ER9a ExonRegion 0 0.00 0.00 0.42 0.00 1.22 0.00 0.60 0.66 0.42 0.00 0.00 0.00 4.40 0.59 0.56 0.00 0.00 1.25 1.45 0.97 0.00 0.00 0.00 27 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER10a ExonRegion 0 24.06 14.77 23.30 6.38 14.96 7.97 11.41 5.07 3.01 8.95 23.22 7.28 50.79 77.34 51.23 6.58 83.77 20.82 2.32 9.03 4.18 3.64 1.08 29 E10_Ab KnownBoundary 0 14.52 5.66 39.68 4.73 26.83 5.34 16.65 5.59 1.79 9.78 12.48 6.30 61.85 54.15 75.04 0.00 102.95 17.24 13.27 6.07 0.00 0.00 0.00 30 ER10b ExonRegion 0 10.44 12.67 23.62 6.14 19.81 7.61 11.47 3.66 2.13 7.84 23.93 7.41 38.01 64.98 46.45 12.20 79.98 14.91 3.73 7.68 2.58 0.00 0.00 31 E10a_E11a KnownJunction 0 0.00 3.35 8.25 0.00 0.00 0.00 2.21 1.85 0.00 0.00 4.79 0.00 6.33 11.12 8.90 0.00 13.37 0.00 0.00 2.62 0.00 0.00 0.00 32 E10a_E11b KnownJunction 0 0.00 2.43 1.83 2.90 10.87 0.00 0.00 0.00 2.46 3.76 4.69 0.00 12.50 7.06 25.84 0.00 31.32 0.00 0.00 3.26 0.00 0.00 0.00 33 E10a_E11c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.06 0.00 4.21 0.00 0.00 0.00 0.00 0.00 0.00 34 E10_Db NovelBoundary 0 10.96 0.00 6.80 2.80 3.74 0.00 2.25 0.00 4.51 4.00 5.16 0.00 0.00 11.48 0.00 0.00 31.32 2.36 0.00 9.20 0.00 2.57 0.00 35 ER10c ExonRegion 0 0.00 0.00 0.61 0.00 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.69 2.03 0.00 0.00 3.30 0.00 0.00 0.00 0.00 0.00 0.00 36 Ix Intron 0 14.23 14.12 16.88 3.93 4.40 2.81 7.01 4.05 3.50 4.37 6.78 1.43 38.64 22.37 17.88 1.41 23.52 8.43 2.79 4.66 1.85 4.26 0.97 37 Ix_AR1 ActiveIntronRegion 0 18.72 20.04 18.26 2.88 5.05 2.34 7.87 4.24 3.51 6.59 10.51 2.68 60.75 28.88 20.06 1.34 38.35 6.69 5.25 6.87 3.52 6.39 1.13 38 Ix_SR2 SilentIntronRegion 0 12.33 18.35 16.77 4.61 4.23 4.84 10.07 3.14 3.73 7.76 5.58 0.90 33.85 23.14 14.92 1.51 20.28 13.94 0.83 3.84 2.43 6.38 2.40 39 Ix_AR2 ActiveIntronRegion 0 9.29 14.07 14.34 3.71 7.25 4.21 4.70 2.51 2.73 2.33 5.35 1.27 18.47 21.11 17.55 2.23 21.27 16.01 0.35 2.74 3.33 2.97 1.29 40 Ix_AR3 ActiveIntronRegion 0 13.67 12.02 19.75 5.78 5.01 2.32 8.94 4.94 3.33 3.16 6.06 1.48 40.16 15.14 21.25 0.84 19.66 6.21 3.29 4.20 0.20 3.98 0.68 41 Ix_SR3 SilentIntronRegion 0 14.08 7.44 13.72 2.70 1.45 1.78 3.28 4.31 3.97 2.35 5.19 0.47 27.98 23.82 13.85 1.58 15.36 4.93 2.25 4.46 0.71 1.68 0.00 42 E11_Aa NovelBoundary 0 11.26 12.23 10.02 0.00 3.57 0.00 1.68 6.37 1.77 1.02 4.84 0.00 12.66 26.13 0.00 0.00 18.33 2.49 0.00 5.82 0.00 2.82 0.00 43 E11_Ab NovelBoundary 0 14.52 6.51 13.99 2.06 0.00 0.00 6.62 0.00 0.00 0.00 7.26 0.00 33.93 28.55 30.66 4.36 4.49 5.14 0.00 6.46 0.00 0.00 0.00 44 ER11a ExonRegion 0 2.12 2.19 11.03 3.04 1.03 0.71 3.06 4.25 2.76 2.03 6.24 0.00 25.61 19.74 19.64 0.00 13.46 3.70 0.00 2.45 0.00 0.00 0.00 45 E11_Ac KnownBoundary 1 9.93 12.56 36.16 13.25 10.95 0.00 11.26 9.94 8.42 13.35 5.32 0.00 89.44 34.49 48.21 0.00 35.44 17.87 4.80 18.86 0.00 0.00 0.00 46 ER11b ExonRegion 1 6.08 6.43 26.84 8.49 6.73 0.41 5.51 6.69 6.22 9.29 9.66 0.00 85.93 36.46 50.44 0.00 37.69 11.80 2.16 10.84 0.00 0.00 0.00 47 ER11c ExonRegion 0 14.75 11.77 23.44 9.44 7.36 3.14 5.09 11.17 7.56 5.69 18.05 1.16 46.66 37.63 44.57 6.64 39.46 13.99 0.61 7.81 2.15 0.66 0.95 48 E11_Da KnownBoundary 0 19.56 16.51 19.96 12.42 11.29 2.78 2.12 5.38 9.58 6.39 14.11 0.00 26.30 23.96 55.26 0.00 30.48 6.47 0.00 8.50 0.00 0.00 0.00 49 ER11d ExonRegion 0 53.05 13.97 14.44 11.33 11.49 6.40 4.54 12.38 9.17 6.22 16.38 2.84 43.98 25.45 44.33 6.77 26.41 13.48 1.98 6.00 3.18 0.03 1.01 50 E11_Db KnownBoundary 0 158.77 28.94 11.35 12.12 3.74 19.31 10.33 15.98 9.11 4.57 21.74 12.00 87.82 37.14 39.19 12.30 36.19 19.65 4.14 3.26 2.84 0.00 4.35 51 ER11e ExonRegion 0 46.31 12.89 10.55 6.63 2.40 6.22 6.42 6.59 4.92 2.24 9.14 3.23 45.79 18.97 22.08 3.58 16.39 6.80 0.70 1.77 2.43 0.00 1.49 52 E11_Dc KnownBoundary 0 9.41 8.55 7.57 4.13 4.16 2.78 1.99 1.64 1.10 2.82 9.32 0.00 13.31 21.31 8.90 0.00 8.23 0.00 0.00 3.20 0.00 0.00 0.00 53 ER11f ExonRegion 0 1.96 3.18 1.79 1.38 0.70 2.13 4.53 0.23 2.51 0.70 2.41 0.00 9.99 9.04 10.55 0.00 8.80 0.00 0.00 2.59 0.00 0.00 0.00