Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PRKAB2	Gene	0	26.50	75.22	29.16	73.21	42.73	75.18	36.72	38.16	27.83	44.33	34.05	31.97	30.13	25.97	13.75	23.40	24.48	27.58	21.24	20.65	19.24	28.06	18.76
2	474939	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	442342	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	254101	Transcript	0	3.22	30.03	7.17	22.98	12.53	63.40	26.71	17.52	22.08	35.71	30.88	11.52	15.45	34.16	17.45	25.05	26.46	52.43	24.02	27.30	36.07	15.31	21.07
5	425272	Transcript	0	0.00	3.35	0.00	3.50	0.00	0.00	0.00	0.00	0.00	3.04	0.00	0.00	0.00	2.47	0.00	0.00	0.00	6.09	0.00	0.00	0.00	0.00	7.60
6	496858	Transcript	0	2.49	0.00	0.00	0.93	7.51	0.00	2.64	1.38	0.61	0.02	13.92	13.35	14.47	5.08	3.87	8.35	12.20	4.46	0.00	0.00	0.00	6.01	0.00
7	IG11	Intergenic	0	1.55	4.22	3.12	6.44	4.57	13.21	7.27	5.66	8.99	5.00	6.60	4.29	0.47	14.29	10.37	9.07	3.62	16.02	5.44	8.05	7.26	0.76	4.66
8	IG11_AR2	ActiveIntergenicRegion	0	2.03	5.65	4.35	8.80	6.37	17.84	10.09	7.88	12.52	6.95	8.87	5.97	0.66	19.25	14.03	12.63	5.05	22.32	7.36	11.21	10.12	1.06	6.49
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	11.53	2.27	0.00	2.65	0.82	0.00	0.00	0.00	3.02	0.00	3.82	5.19	8.45	3.19	1.82	0.63	1.49	1.68
10	ER1b	ExonRegion	0	0.00	0.00	0.00	1.99	2.31	25.97	7.71	2.76	8.58	3.41	0.00	5.73	0.00	10.73	0.39	10.56	16.55	19.38	13.95	5.98	2.29	1.46	2.50
11	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	5.19	7.39	31.69	3.80	4.19	4.28	2.61	0.00	5.85	0.00	0.00	4.45	12.05	4.77	12.48	15.91	12.02	3.15	0.00	3.93
12	ER1c	ExonRegion	0	8.26	17.11	1.11	8.38	11.42	77.56	14.27	7.21	7.83	10.83	13.81	2.32	1.14	17.31	10.69	21.38	16.67	40.11	25.72	11.26	19.51	6.86	17.19
13	E1a_E2a	KnownJunction	0	22.45	39.80	1.83	15.45	34.21	137.19	24.86	12.69	16.00	22.13	34.96	0.00	6.66	23.37	16.07	51.44	40.49	97.42	46.21	20.01	43.37	16.29	31.76
14	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	9.92	4.24	8.06	7.86	2.42	5.27	2.71	7.63	6.15	0.00	9.48	4.45	22.81	17.30	22.88	0.00	2.56	5.68	10.90	8.71
15	ER2a	ExonRegion	0	2.97	14.01	2.47	11.92	13.53	23.27	11.97	16.32	17.89	20.16	33.71	4.86	6.58	25.09	7.75	30.83	29.36	52.68	24.38	27.17	37.68	12.59	18.00
16	E2_Da	NovelBoundary	0	0.00	2.57	0.00	3.63	0.00	2.84	1.99	0.00	0.00	0.00	0.00	0.00	0.00	5.42	0.00	0.00	7.85	7.71	0.00	2.62	2.78	5.69	11.69
17	E2a_E3a	KnownJunction	0	0.00	15.59	9.40	32.43	12.65	16.52	11.88	15.65	20.69	36.29	28.17	5.55	6.01	44.56	23.86	45.37	25.90	78.84	47.72	32.98	45.53	25.60	32.44
18	E2a_E4a	KnownJunction	0	0.00	12.04	0.00	5.19	7.56	2.16	1.63	3.33	9.87	7.74	6.58	0.00	0.00	0.00	0.00	12.05	7.39	9.29	4.42	5.94	5.87	5.08	0.00
19	ER3a	ExonRegion	0	7.07	36.75	7.16	25.27	19.72	94.57	28.84	26.56	28.58	44.48	51.38	21.62	22.86	42.03	14.02	39.69	36.53	73.38	21.63	36.03	44.93	17.32	27.61
20	E3_Da	NovelBoundary	0	0.00	3.35	0.00	4.89	0.00	13.00	6.40	6.94	8.97	16.49	16.53	11.55	6.49	30.90	0.00	3.76	19.92	3.86	4.80	30.10	3.09	6.00	0.00
21	E3a_E4a	KnownJunction	0	3.70	51.50	8.19	28.23	15.62	127.09	63.20	27.89	38.08	62.05	40.48	18.91	32.95	50.03	26.70	15.12	40.11	56.38	23.53	38.48	53.81	15.00	24.24
22	I3	Intron	0	2.90	9.00	3.30	12.54	8.17	14.63	12.88	6.58	12.39	9.80	15.91	20.23	22.81	14.74	1.87	9.08	17.49	8.60	1.99	16.98	6.59	16.37	7.51
23	I3_SR1	SilentIntronRegion	0	2.91	9.02	3.31	12.56	8.19	14.67	12.91	6.60	12.42	9.83	15.94	20.28	22.86	14.78	1.88	9.10	17.54	8.62	1.99	17.02	6.61	16.41	7.52
24	E4_Aa	NovelBoundary	0	0.00	14.67	5.47	12.55	27.42	56.33	23.54	11.62	10.85	8.43	17.37	11.70	46.43	16.66	0.00	8.46	3.83	12.60	0.00	20.96	8.71	11.63	23.39
25	ER4a	ExonRegion	0	5.56	47.31	17.18	38.91	27.50	86.13	40.31	33.19	56.79	74.18	77.15	37.17	63.71	72.31	21.57	59.82	42.67	95.91	32.57	38.77	51.97	49.85	61.42
26	E4_Da	NovelBoundary	0	3.48	12.30	2.93	10.75	7.13	7.67	16.87	6.41	12.82	10.85	28.32	24.91	0.00	11.65	0.00	10.34	9.54	7.92	0.00	8.50	8.03	10.90	3.50
27	E4a_E5a	KnownJunction	0	10.67	31.64	20.76	50.54	22.58	53.26	11.48	41.81	73.49	95.84	52.70	17.41	62.01	78.40	46.60	85.02	49.84	113.00	68.43	25.69	50.90	115.67	59.41
28	E4a_E6a	KnownJunction	0	0.00	3.35	0.00	3.50	0.00	0.00	0.00	0.00	0.00	3.04	0.00	0.00	0.00	2.47	0.00	0.00	0.00	6.09	0.00	0.00	0.00	0.00	7.60
29	I4	Intron	0	0.95	5.48	1.23	7.76	9.02	12.77	6.25	4.05	6.20	6.91	10.86	8.01	9.55	9.83	1.92	6.68	11.87	12.81	4.29	7.65	7.42	11.23	9.24
30	I4_SR1	SilentIntronRegion	0	0.97	5.61	1.26	7.91	9.21	13.06	6.39	4.14	6.34	7.07	11.10	8.19	9.76	10.05	1.96	6.83	12.13	13.10	4.39	7.82	7.57	11.48	9.44
31	E5_Aa	NovelBoundary	0	7.56	5.72	3.49	24.77	12.05	13.63	23.05	16.18	14.53	11.52	13.95	5.70	6.82	14.24	5.19	21.02	13.46	24.87	21.46	21.03	0.00	33.68	19.55
32	ER5a	ExonRegion	1	8.87	36.86	26.96	52.80	23.60	89.90	41.13	52.94	77.84	107.47	130.94	80.44	82.79	98.04	19.18	67.87	103.31	90.56	64.58	48.69	66.07	75.92	60.87
33	E5_Da	NovelBoundary	0	3.63	0.00	0.00	20.28	0.00	8.23	4.20	1.97	7.20	1.16	2.53	11.85	0.00	4.77	0.00	8.20	13.56	0.00	12.71	9.65	0.00	11.08	4.27
34	E5a_E6a	KnownJunction	1	24.52	59.59	24.69	52.87	34.89	106.87	35.51	50.52	79.43	93.56	93.08	93.93	90.42	79.93	14.09	64.51	92.38	74.86	23.91	50.24	52.26	78.62	54.21
35	E6_Aa	NovelBoundary	0	11.34	11.05	7.86	17.68	20.71	24.76	36.66	9.20	7.09	8.95	13.42	12.15	24.67	22.31	12.49	3.67	16.74	16.50	0.00	15.60	10.93	3.06	16.48
36	ER6a	ExonRegion	1	17.68	84.52	27.25	66.32	58.13	171.28	49.54	76.36	93.15	123.88	146.87	77.16	147.06	111.41	20.59	123.63	107.12	155.09	83.02	70.90	84.20	107.23	96.10
37	E6_Da	KnownBoundary	1	23.49	115.24	23.21	46.28	85.23	173.25	57.85	56.27	61.66	79.83	149.14	24.91	81.49	37.38	0.00	171.49	97.99	122.41	143.82	59.25	65.18	111.51	129.84
38	E6a_E6b	NovelJunction	1	33.34	113.80	25.96	75.95	58.15	178.48	74.19	77.59	75.87	96.81	160.20	6.75	39.12	19.84	5.69	174.57	97.62	138.50	129.89	81.88	82.84	128.35	123.01
39	E6_Ab	KnownBoundary	0	3.48	23.55	7.60	32.83	10.87	27.94	14.93	23.58	26.16	35.43	23.22	11.40	53.08	14.24	11.00	36.91	18.89	28.89	12.42	32.53	15.44	2.94	14.43
40	ER6b	ExonRegion	0	21.17	119.98	28.18	74.28	93.65	214.55	82.09	84.69	95.10	137.63	182.66	77.93	175.88	142.92	42.07	178.33	122.13	175.54	132.19	91.49	91.45	131.26	135.09
41	ER6c	ExonRegion	1	12.19	93.72	18.43	63.59	74.08	176.25	88.80	69.34	88.72	112.25	144.72	95.87	136.08	124.38	24.00	84.45	107.75	111.52	82.46	53.98	79.27	67.03	78.49
42	E6b_E7a	KnownJunction	1	30.23	113.66	16.88	65.89	103.14	186.82	124.98	67.11	93.95	78.73	167.78	75.02	185.05	159.28	18.54	100.06	160.45	85.19	76.80	50.24	91.37	82.11	88.95
43	ER7a	ExonRegion	0	11.13	65.34	10.00	54.24	37.81	106.47	54.99	46.99	53.29	68.22	87.68	83.83	108.55	86.95	22.41	66.72	80.51	79.24	47.73	45.27	67.71	53.21	51.92
44	E7_Da	NovelBoundary	0	7.41	17.37	1.36	3.66	7.47	26.12	10.51	4.19	9.17	4.51	7.00	12.45	20.45	9.24	0.00	8.37	9.54	6.84	0.00	20.20	2.29	2.45	7.68
45	E7a_E8a	KnownJunction	0	6.22	0.00	0.00	1.86	16.47	0.00	5.96	2.55	1.33	0.00	27.01	18.76	14.93	7.18	4.57	17.26	13.84	6.72	0.00	0.00	0.00	8.39	0.00
46	E7a_E9a	KnownJunction	1	11.34	68.61	11.80	54.67	22.67	95.80	41.65	43.74	36.26	75.13	33.96	60.62	38.47	62.98	4.45	23.33	30.20	73.41	56.47	35.73	73.21	32.58	41.32
47	I7	Intron	0	2.06	7.45	0.68	6.83	7.81	15.63	8.51	4.82	6.47	3.20	15.73	10.95	15.22	12.04	0.68	7.32	10.86	6.11	0.95	7.15	3.79	5.44	3.07
48	I7_AR1	ActiveIntronRegion	0	1.14	2.93	0.00	3.57	10.01	12.28	8.07	3.35	4.74	3.52	8.97	14.94	21.76	12.39	1.34	6.49	7.27	8.00	1.70	5.54	2.84	0.86	2.94
49	I7_SR1	SilentIntronRegion	1	2.41	9.20	0.95	8.09	6.98	16.95	8.70	5.39	7.14	3.08	18.36	9.44	12.74	11.92	0.42	7.65	12.26	5.40	0.65	7.78	4.16	7.22	3.12
50	E8_Aa	NovelBoundary	0	0.00	10.06	1.60	14.98	3.99	62.41	15.10	4.97	13.08	7.20	22.27	33.16	6.82	7.53	0.00	4.19	8.88	4.60	0.00	3.07	0.00	0.00	0.00
51	ER8a	ExonRegion	0	1.26	0.00	0.00	0.92	6.07	0.00	1.97	1.59	0.50	0.06	12.59	21.30	22.31	5.57	2.59	7.79	10.71	3.05	0.00	0.00	0.00	7.26	0.00
52	E8_Da	NovelBoundary	0	3.19	6.31	4.44	19.74	0.00	11.98	11.84	4.35	11.17	4.16	39.90	38.56	66.23	21.48	0.00	12.30	26.37	11.36	4.80	6.52	0.00	10.96	8.19
53	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.16	0.00	6.17	2.47	4.45	0.00	12.06	3.61	0.00	0.00	0.00	2.39	0.00
54	I8	Intron	1	3.86	16.05	2.80	14.83	14.50	30.02	12.39	6.98	10.95	6.54	33.35	19.15	20.38	27.10	3.07	19.08	28.39	12.66	5.25	13.16	6.49	12.15	7.96
55	I8_SR1	SilentIntronRegion	1	3.87	16.07	2.80	14.85	14.51	30.06	12.41	6.99	10.96	6.55	33.39	19.17	20.40	27.13	3.07	19.10	28.42	12.68	5.26	13.17	6.49	12.16	7.96
56	E9_Aa	NovelBoundary	0	3.78	28.35	8.99	20.24	16.04	52.98	14.04	10.56	18.23	10.64	12.32	0.00	39.28	16.36	0.00	24.44	9.35	25.87	0.00	21.22	11.80	8.27	17.16
57	ER9a	ExonRegion	1	17.90	81.40	13.54	63.01	47.10	144.00	55.40	55.43	50.16	84.21	92.70	87.53	101.11	86.89	14.47	61.88	78.32	70.42	44.77	52.87	61.12	50.25	50.66
58	E9_Da	KnownBoundary	1	32.08	144.51	17.12	62.83	96.01	181.49	121.93	65.47	57.03	75.97	141.51	94.08	95.12	109.95	8.90	53.23	109.21	53.47	46.02	60.98	77.90	68.21	41.66
59	ER9b	ExonRegion	0	9.50	64.53	9.81	66.40	48.38	106.75	42.80	42.43	50.36	69.52	78.65	44.21	69.15	52.78	15.92	59.97	53.46	65.85	38.96	51.42	43.22	57.90	35.60
60	E9_Db	KnownBoundary	0	0.00	48.54	2.72	43.02	24.19	128.79	21.90	32.12	28.18	44.08	48.22	29.71	41.39	24.90	4.94	31.10	50.21	47.75	21.84	31.13	33.30	25.53	16.48
61	ER9c	ExonRegion	0	32.43	83.61	35.56	84.13	46.12	65.69	35.52	37.45	21.38	36.61	18.35	24.03	16.39	11.31	13.49	12.08	11.07	11.29	14.31	12.94	7.64	22.63	9.95
62	ER9d	ExonRegion	0	2.12	16.27	3.92	6.00	2.14	15.40	2.91	0.00	0.99	0.00	3.48	0.00	0.00	0.00	5.22	0.00	3.30	1.11	3.19	1.70	0.00	3.33	0.00