Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BCL9 Gene 0 30.47 85.17 49.41 51.97 48.23 45.01 44.64 59.89 41.61 99.03 78.51 51.23 53.20 49.80 34.35 72.91 85.25 106.09 128.34 74.27 86.09 61.31 62.85 2 234739 Transcript 0 20.29 72.12 45.16 48.18 36.37 41.72 47.29 57.37 44.69 106.55 83.60 58.58 70.64 46.43 32.50 70.36 98.04 107.28 138.61 79.36 85.36 58.05 59.54 3 497938 Transcript 0 0.00 1.93 1.34 1.99 0.00 0.66 2.16 1.34 0.66 4.90 18.93 0.00 0.00 6.23 6.13 3.86 13.52 7.39 4.64 6.50 12.66 7.56 6.04 4 473292 Transcript 0 0.00 0.00 0.00 1.47 3.40 7.50 3.62 21.03 14.41 11.74 33.22 23.86 6.82 14.48 4.94 20.34 43.48 15.96 12.33 16.94 64.31 19.29 16.90 5 ER1a ExonRegion 0 4.84 28.98 1.90 3.32 6.74 17.31 16.27 8.42 5.22 9.48 4.32 1.89 0.75 1.40 0.00 8.63 13.02 25.59 40.11 25.24 18.44 8.77 7.45 6 E1a_E3a KnownJunction 0 6.52 17.56 8.28 4.83 0.00 25.67 11.61 10.93 9.52 24.31 9.74 7.65 0.00 2.47 0.00 14.78 29.55 18.57 21.84 54.90 45.28 14.21 0.00 7 ER2a ExonRegion 0 0.00 1.36 0.19 0.44 0.00 1.32 2.24 1.03 0.01 2.76 14.01 0.00 0.00 4.82 2.12 0.54 9.46 3.63 9.29 4.30 7.96 3.30 4.05 8 E2a_E3a KnownJunction 0 0.00 2.50 2.48 3.53 0.00 0.00 2.08 1.64 1.30 7.04 23.85 0.00 0.00 7.65 10.14 7.18 17.58 11.15 0.00 8.69 17.36 11.82 8.02 9 ER3a ExonRegion 0 4.03 10.97 18.65 22.48 19.84 28.77 25.17 28.97 21.02 50.23 56.76 30.98 7.47 23.17 17.49 47.51 38.98 84.26 113.94 80.65 65.16 34.34 50.05 10 E3a_E4a KnownJunction 0 7.41 30.19 24.95 17.65 12.31 35.83 58.38 37.01 22.02 54.23 69.54 80.88 20.94 37.14 15.95 50.16 74.15 73.17 100.90 75.29 72.84 36.80 41.91 11 ER4a ExonRegion 0 6.02 61.40 17.76 23.97 11.41 30.49 30.18 30.13 31.18 67.11 76.38 53.05 27.18 32.15 21.85 46.55 62.64 81.70 54.15 75.90 80.95 39.89 34.00 12 E4a_E5a KnownJunction 0 10.30 74.59 28.30 28.27 19.78 18.57 20.01 35.57 41.41 74.76 59.12 44.11 21.59 28.84 24.11 66.99 69.00 67.44 29.84 79.64 83.21 36.92 24.67 13 ER5a ExonRegion 0 13.40 61.69 27.60 27.37 11.74 22.57 17.06 36.73 34.69 68.37 73.45 37.76 19.80 28.83 27.88 64.07 84.91 84.28 71.76 67.79 83.92 31.19 37.28 14 E5_Ab KnownBoundary 0 20.52 68.34 35.10 30.47 6.88 24.70 22.30 40.01 39.55 74.84 76.18 36.91 25.97 32.08 38.94 71.78 98.83 85.15 109.37 62.13 78.46 30.25 46.78 15 ER5b ExonRegion 0 16.30 33.30 20.59 22.22 11.00 21.59 22.61 42.50 31.40 84.63 69.42 54.61 34.94 53.68 29.48 71.22 77.41 104.58 89.11 77.95 87.07 46.23 57.19 16 E5_Da KnownBoundary 0 16.97 61.50 21.58 35.53 30.14 54.51 39.92 45.55 50.90 94.39 79.49 98.73 26.30 51.39 55.63 85.36 101.82 163.16 145.13 104.76 111.88 63.99 74.10 17 ER5c ExonRegion 0 12.08 29.28 18.75 25.63 15.18 25.09 17.87 44.42 38.00 86.80 94.18 53.96 36.25 59.72 24.14 78.34 111.62 126.35 102.81 97.21 99.75 59.68 58.75 18 E5b_E6a KnownJunction 0 10.67 63.74 27.38 20.98 8.32 37.99 29.90 49.41 37.62 92.43 108.03 61.22 29.22 57.27 19.90 87.93 140.16 137.46 112.94 107.96 101.81 94.61 64.79 19 ER6a ExonRegion 1 6.84 52.08 20.69 10.64 28.50 37.66 32.07 45.27 47.16 82.05 93.37 72.55 40.98 63.77 18.60 58.41 117.16 117.79 107.90 104.68 111.44 64.00 58.76 20 E6_Da KnownBoundary 1 13.71 37.43 22.44 10.19 42.36 81.66 40.85 30.07 22.51 70.94 54.80 76.22 33.93 53.62 8.90 52.21 89.95 80.50 123.96 92.87 67.34 58.66 65.73 21 E6a_E7a KnownJunction 0 0.00 0.00 0.00 1.47 3.40 7.50 3.62 21.03 14.41 11.74 33.22 23.86 6.82 14.48 4.94 20.34 43.48 15.96 12.33 16.94 64.31 19.29 16.90 22 ER6b ExonRegion 1 9.83 28.58 21.42 16.93 18.32 28.62 27.03 44.53 38.22 101.60 99.94 43.06 52.41 56.01 12.94 82.78 99.53 125.50 126.11 84.89 75.70 59.27 78.31 23 E6b_E7a KnownJunction 1 13.11 65.19 25.25 29.87 41.85 23.45 68.81 54.55 36.23 116.39 97.02 55.37 60.55 46.50 29.92 51.44 145.11 111.97 117.46 96.39 59.18 40.05 71.11 24 E7_Aa NovelBoundary 1 14.15 25.13 9.20 4.99 15.20 21.07 5.96 13.60 16.29 10.85 4.74 43.66 0.00 4.94 4.45 3.42 15.90 15.21 13.37 27.48 5.68 5.94 4.35 25 ER7a ExonRegion 0 15.34 62.84 30.26 39.71 39.23 40.26 52.96 93.51 78.14 145.34 132.20 99.30 146.53 76.42 36.69 125.66 145.48 155.37 211.11 138.52 141.84 97.90 109.51 26 E7a_E8a KnownJunction 1 8.96 60.98 38.91 42.79 27.50 28.11 35.15 81.57 73.76 155.48 107.71 163.55 140.74 77.76 34.12 152.44 180.55 175.39 244.62 118.12 139.62 106.30 50.79 27 ER8a ExonRegion 0 11.94 55.98 35.27 41.13 26.89 36.55 46.07 78.26 69.29 163.77 121.62 133.74 149.61 82.10 43.90 120.28 183.73 127.20 236.55 122.32 139.98 98.63 92.89 28 E8a_E9a KnownJunction 0 31.78 120.50 43.52 59.53 44.65 44.97 64.52 93.16 81.94 182.34 147.51 101.88 122.72 68.22 45.12 113.56 209.44 128.38 218.55 129.82 137.58 103.12 64.11 29 ER9a ExonRegion 0 16.29 69.99 38.51 41.93 27.56 35.12 34.64 63.18 46.99 115.19 91.49 50.96 53.09 57.08 29.20 83.46 100.08 130.18 143.76 78.29 104.78 69.13 69.03 30 E9a_E10a KnownJunction 0 9.85 84.39 61.03 64.56 19.35 59.28 52.91 89.29 75.61 147.10 103.55 95.43 118.99 60.51 39.93 117.23 120.90 137.00 161.04 79.77 100.57 64.11 93.13 31 ER10a ExonRegion 0 24.87 109.81 70.04 80.60 56.73 58.70 47.28 91.50 70.74 147.59 122.27 111.27 133.05 69.91 49.94 109.95 119.91 182.45 214.84 103.97 125.52 80.45 91.63 32 E10_Da NovelBoundary 0 3.70 14.87 3.13 8.76 7.81 5.79 6.01 17.87 8.07 2.69 9.05 18.61 0.00 2.47 5.56 7.35 12.62 1.70 22.59 17.77 0.00 8.70 3.50 33 E10a_E11a KnownJunction 0 27.19 66.76 103.43 100.89 61.55 58.77 84.00 52.08 44.30 127.57 94.92 71.27 116.23 56.63 70.21 55.88 72.93 129.46 223.72 75.23 116.76 81.32 60.78 34 I10_AR1 ActiveIntronRegion 0 10.40 15.83 8.20 7.22 12.19 8.50 12.68 18.20 13.31 5.25 4.83 13.85 7.58 3.25 2.82 3.74 11.57 9.71 7.67 14.51 2.91 6.03 3.29 35 I10_AR2 ActiveIntronRegion 0 5.83 25.11 10.69 9.37 11.18 4.30 9.19 7.82 6.62 5.61 4.36 9.35 5.52 0.62 2.15 3.11 2.09 3.14 8.32 9.84 0.34 8.61 1.37 36 E11_Aa NovelBoundary 0 0.00 20.59 33.00 5.23 7.30 8.40 0.00 11.54 8.62 9.16 2.68 6.30 0.00 0.00 10.01 3.59 0.00 6.76 4.80 23.14 3.09 8.76 0.00 37 ER11a ExonRegion 0 58.60 129.41 78.21 79.33 86.93 65.30 65.86 66.10 38.14 93.96 65.21 46.96 48.59 45.63 47.77 65.87 69.90 83.69 118.71 65.10 69.74 60.06 59.87 38 IG21_AR1 ActiveIntergenicRegion 0 17.97 18.82 36.72 8.59 2.77 3.47 2.13 6.36 3.91 3.14 2.15 8.40 8.40 3.98 5.69 4.44 5.27 5.89 16.46 4.53 1.52 5.14 2.02 39 IG21_SR2 SilentIntergenicRegion 0 30.15 23.32 31.45 12.33 1.25 2.89 3.21 2.46 4.64 4.23 9.36 3.75 3.13 9.42 4.26 0.00 3.81 6.49 18.26 11.44 2.45 1.67 0.52 40 IG21_SR3 SilentIntergenicRegion 0 15.01 19.92 21.26 6.85 1.55 3.84 1.41 5.88 5.50 1.02 6.16 4.69 2.70 9.06 3.72 5.78 6.77 12.58 16.74 6.31 6.71 3.90 1.60 41 IG21_AR2 ActiveIntergenicRegion 0 12.81 7.90 18.57 6.10 2.11 1.66 2.09 7.15 4.51 2.90 1.67 8.70 9.53 5.73 5.02 3.98 3.87 11.98 22.23 4.24 2.80 3.76 1.62 42 IG21_SR5 SilentIntergenicRegion 0 3.36 4.34 6.62 2.22 1.24 0.42 1.05 1.59 2.63 1.29 1.54 5.67 11.31 5.12 1.16 3.90 3.60 7.45 13.80 4.86 1.08 2.10 2.04 43 IG21_AR4 ActiveIntergenicRegion 0 2.95 3.32 6.19 1.37 1.08 0.25 1.80 0.64 1.00 0.47 1.87 7.50 17.37 6.25 1.37 3.22 4.68 15.82 14.41 6.90 3.14 2.01 1.67 44 IG21_AR6 ActiveIntergenicRegion 0 5.75 4.75 4.85 1.26 2.89 0.00 0.00 0.80 1.71 2.15 2.39 7.18 5.97 8.06 1.71 3.22 1.02 12.64 17.27 3.62 2.42 3.57 3.21 45 IG21_AR7 ActiveIntergenicRegion 0 5.83 6.49 10.05 3.53 1.16 1.86 0.96 5.97 5.07 2.72 2.52 1.66 11.03 6.82 2.55 2.15 5.74 17.57 34.61 12.95 5.43 4.23 10.64