Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 WDR3 Gene 0 54.84 151.79 82.55 96.68 79.65 91.86 74.77 44.84 43.32 120.05 186.26 199.54 130.07 202.33 115.85 144.52 164.30 73.91 77.89 113.72 84.12 72.26 53.89 2 487202 Transcript 0 2.39 7.09 0.86 0.46 2.58 6.02 3.39 1.75 0.65 1.96 4.21 0.00 1.35 3.87 4.90 5.57 10.05 2.67 3.23 2.76 9.19 5.18 1.94 3 349139 Transcript 0 63.41 198.94 100.34 114.48 103.67 115.84 92.84 52.47 51.59 142.62 245.58 258.91 175.84 260.09 149.60 189.64 221.94 89.88 106.91 141.86 114.13 93.45 73.40 4 471680 Transcript 0 5.49 6.57 4.16 9.84 6.00 5.17 3.82 1.84 3.69 10.53 42.54 4.97 16.66 31.91 16.62 29.47 36.43 22.50 18.05 22.30 11.86 2.21 1.57 5 369441 Transcript 0 5.41 9.49 2.72 1.82 4.76 12.84 8.24 2.50 1.51 4.84 20.83 0.48 1.04 20.39 10.32 16.51 23.47 9.85 7.79 13.00 19.59 7.64 6.53 6 ER1a ExonRegion 0 5.64 14.60 2.23 0.67 7.73 18.05 8.86 3.69 1.92 5.02 11.38 0.00 0.00 10.03 14.64 16.51 22.37 7.97 9.63 7.61 27.52 15.42 5.81 7 E1a_E2b KnownJunction 1 77.27 127.35 10.67 16.98 68.25 163.94 90.75 17.33 16.52 42.58 155.04 0.00 6.82 180.24 84.18 153.29 196.63 97.62 80.38 120.10 215.42 83.16 67.61 8 ER1b ExonRegion 1 35.98 74.95 6.13 7.40 34.78 100.86 48.99 13.09 8.47 22.94 95.54 0.00 2.68 100.46 63.41 85.34 117.89 62.03 51.88 66.57 133.17 51.79 40.69 9 ER1c ExonRegion 1 39.91 83.96 6.48 9.54 39.75 113.70 59.96 15.80 10.23 31.29 135.30 0.00 8.71 151.97 73.77 136.29 148.54 76.81 62.80 91.79 159.93 67.27 54.96 10 ER1d ExonRegion 0 5.05 13.15 6.75 13.00 8.44 10.34 7.64 3.68 6.14 14.97 35.01 9.94 33.33 46.93 23.60 51.34 33.96 33.19 27.91 26.25 10.13 4.42 3.14 11 E1b_E2b KnownJunction 1 5.93 0.00 1.57 6.69 3.57 0.00 0.00 0.00 1.24 6.10 50.07 0.00 0.00 16.89 9.64 7.60 38.90 11.81 8.19 18.34 13.59 0.00 0.00 12 ER2a ExonRegion 0 5.41 9.49 2.72 1.82 4.76 12.84 8.24 2.50 1.51 4.84 20.83 0.48 1.04 20.39 10.32 16.51 23.47 9.85 7.79 13.00 19.59 7.64 6.53 13 ER2b ExonRegion 1 17.08 38.54 20.22 29.12 13.48 44.39 30.77 21.55 26.06 53.97 124.62 22.25 27.68 166.29 55.32 139.66 134.98 90.27 61.69 97.91 93.93 36.08 36.78 14 E2_Da KnownBoundary 0 3.33 24.80 26.34 33.36 7.30 26.18 14.49 23.58 33.82 67.88 110.76 85.98 83.27 77.87 84.43 171.84 165.40 98.91 62.97 93.38 134.61 14.63 47.80 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E2a_E4a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 13.27 0.00 0.00 0.00 0.00 17 ER2c ExonRegion 0 8.76 35.01 36.28 45.65 16.27 25.15 15.89 27.96 39.57 106.09 186.88 97.61 100.07 214.16 92.98 171.18 182.89 116.32 73.45 156.37 146.43 77.30 57.92 18 E2b_E4a KnownJunction 1 6.30 54.86 69.72 66.26 22.33 48.10 30.21 28.34 33.80 127.73 147.72 94.68 152.59 310.14 112.24 316.58 145.49 171.91 74.92 170.59 73.58 86.22 95.44 19 ER3a ExonRegion 0 0.36 3.91 1.23 1.23 0.00 0.00 2.37 3.39 0.00 0.71 4.30 0.00 3.01 0.70 0.16 0.00 0.69 0.00 2.70 1.41 0.08 0.00 0.00 20 E3_Da KnownBoundary 0 2.96 9.41 1.42 5.69 0.00 0.00 8.74 4.39 0.00 1.67 4.74 0.00 13.64 2.12 0.00 0.00 3.93 0.00 0.00 3.13 0.00 0.00 0.00 21 ER3b ExonRegion 0 1.53 4.03 0.36 0.73 0.00 0.00 1.32 1.55 0.04 0.85 1.23 0.00 4.04 1.57 0.05 0.20 3.47 0.03 0.05 0.66 0.04 0.11 0.00 22 E3b_E4a KnownJunction 0 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.30 0.00 0.00 0.00 0.00 0.00 0.00 23 ER4a ExonRegion 0 19.34 91.81 63.16 71.53 54.98 118.98 70.48 34.43 42.24 125.14 199.85 184.48 130.36 264.57 78.42 187.05 208.46 106.10 69.26 155.68 111.64 66.03 61.39 24 E4a_E5a KnownJunction 1 36.97 89.13 59.37 91.96 101.87 114.76 42.26 40.17 35.30 129.26 230.69 197.61 81.49 279.06 75.28 200.37 222.53 86.72 135.72 164.65 93.35 75.99 51.39 25 ER5a ExonRegion 1 26.95 67.77 65.27 86.07 51.42 88.62 56.35 54.58 50.27 135.34 257.86 211.16 140.03 353.08 83.28 235.42 250.48 156.79 105.33 182.91 119.19 76.99 89.73 26 E5a_E6a KnownJunction 0 29.56 64.33 77.02 85.07 44.99 92.56 78.83 78.49 64.18 151.39 235.90 190.86 86.84 329.80 124.24 320.43 224.50 166.68 188.05 166.76 131.71 128.77 83.06 27 ER6a ExonRegion 0 25.82 70.52 55.39 76.02 47.20 63.08 48.19 63.75 47.95 136.44 285.45 220.02 157.21 300.07 103.52 241.81 271.80 134.00 152.58 163.36 160.91 88.76 72.95 28 E6_Da NovelBoundary 1 30.82 73.54 54.05 69.46 50.42 62.98 46.06 57.42 41.75 135.60 249.64 301.00 170.77 277.18 80.85 222.33 278.82 101.23 121.23 155.51 166.06 62.58 61.03 29 E6b_E7a KnownJunction 1 36.45 96.50 46.24 75.78 54.33 63.09 55.95 43.09 54.54 136.86 154.30 324.41 167.20 290.60 100.62 201.14 192.80 76.77 83.11 145.16 113.98 70.05 69.23 30 ER6b ExonRegion 0 26.93 70.89 43.99 72.14 48.26 62.22 42.46 44.94 46.93 133.32 210.49 300.38 158.17 262.77 77.63 194.62 219.57 80.54 96.66 137.27 134.20 62.58 64.20 31 ER7a ExonRegion 1 23.63 89.10 48.79 57.55 81.14 117.50 66.52 43.14 57.00 148.07 195.71 208.36 151.30 326.80 77.31 195.17 233.23 118.03 111.75 158.58 149.37 85.40 83.85 32 E7a_E8a KnownJunction 0 30.82 155.63 58.54 55.87 134.21 219.76 91.11 64.24 47.60 141.11 305.81 272.64 265.57 360.41 146.61 320.26 287.70 179.00 159.82 203.13 227.03 151.25 134.19 33 ER8a ExonRegion 1 16.91 114.24 39.48 56.17 60.20 102.48 76.12 31.26 36.14 117.56 221.59 192.28 163.99 279.70 73.01 199.60 229.30 128.31 125.71 134.88 150.24 83.40 83.59 34 E8a_E9a KnownJunction 0 13.19 115.64 57.48 66.29 55.86 70.53 68.67 27.93 43.92 125.20 212.63 138.80 162.98 245.75 69.84 162.09 175.32 102.93 52.99 116.52 120.84 41.70 54.12 35 ER9a ExonRegion 0 28.88 99.63 55.62 59.13 52.02 77.94 66.61 27.99 39.69 119.31 179.55 221.10 151.46 252.66 96.51 128.15 181.45 116.75 68.80 138.28 113.02 84.95 63.68 36 E9a_E10a KnownJunction 0 28.45 157.54 72.14 95.06 46.10 55.65 72.47 29.82 48.55 159.26 166.99 251.63 129.21 204.37 91.97 133.90 156.99 113.83 85.84 141.26 111.14 94.67 66.50 37 ER10a ExonRegion 0 41.12 141.60 91.80 98.10 74.13 104.10 81.60 28.73 39.78 143.44 228.52 254.29 176.50 256.74 81.53 174.90 184.18 97.89 63.77 144.09 85.18 88.51 62.96 38 E10a_E11a KnownJunction 1 32.75 164.38 89.94 121.50 110.53 157.92 100.07 37.09 45.83 171.24 276.65 365.37 441.85 334.75 131.65 221.82 235.06 98.04 122.36 150.46 84.45 109.85 72.22 39 ER11a ExonRegion 0 35.77 127.17 96.15 120.96 99.20 109.40 94.32 44.70 57.64 178.16 246.25 354.05 247.62 285.62 125.48 236.94 210.65 114.56 94.35 150.06 83.64 124.90 81.57 40 E11a_E12a KnownJunction 0 40.90 137.34 100.94 103.32 106.96 175.64 88.63 47.97 48.23 185.59 279.23 303.40 175.96 276.89 97.78 241.22 260.87 103.92 76.80 177.88 133.38 104.53 68.63 41 ER12a ExonRegion 0 35.28 139.08 85.53 98.09 71.26 113.04 72.94 41.63 57.40 156.68 247.83 337.42 171.20 294.06 110.03 237.04 259.83 132.18 111.98 149.01 140.40 81.16 86.17 42 E12a_E13a KnownJunction 1 73.42 254.63 138.91 111.61 82.17 74.39 65.23 50.32 75.09 124.83 266.70 370.02 80.84 285.95 115.71 205.25 277.98 132.44 102.21 139.98 110.64 53.64 106.45 43 ER13a ExonRegion 0 49.58 302.12 94.55 95.40 84.63 70.60 71.32 43.58 42.09 124.96 272.58 240.29 109.82 288.89 102.35 198.12 240.09 119.40 97.56 134.34 124.32 59.05 79.01 44 E13a_E14a KnownJunction 0 64.46 371.38 89.47 98.69 90.58 66.55 82.94 45.88 37.53 101.35 226.22 225.97 110.22 283.54 183.45 214.99 249.28 103.67 109.09 148.93 110.83 76.66 71.28 45 ER14a ExonRegion 0 47.35 363.15 100.34 96.44 88.35 95.05 88.63 49.72 39.44 130.22 225.58 198.26 99.23 236.21 119.55 172.33 217.79 106.03 98.03 137.19 104.89 67.73 83.03 46 E14a_E15a KnownJunction 0 20.23 296.33 78.53 106.81 122.24 88.36 98.92 43.37 35.16 132.08 178.05 251.48 90.90 253.93 133.63 128.43 180.74 73.25 107.58 158.00 122.26 97.67 62.23 47 ER15a ExonRegion 0 48.95 215.54 112.52 167.24 101.65 95.51 107.63 62.04 57.33 167.18 250.11 245.77 163.82 295.95 139.33 196.13 221.35 87.90 111.34 151.46 112.29 111.18 76.32 48 E15a_E16a KnownJunction 0 71.20 279.88 118.00 204.20 185.48 115.05 118.75 68.06 71.09 196.12 370.04 283.14 280.18 389.14 208.54 248.99 280.32 87.84 146.55 183.19 114.16 142.00 91.42 49 ER16a ExonRegion 0 59.15 365.49 69.39 123.67 89.64 76.97 100.50 44.83 45.14 125.39 226.09 252.22 183.05 204.42 127.12 154.03 179.36 50.80 87.43 132.16 74.55 91.17 44.96 50 E16a_E17a KnownJunction 0 85.64 467.55 69.19 108.58 51.61 75.01 79.40 35.16 33.01 118.00 281.91 290.94 244.79 240.92 190.37 188.75 251.71 39.59 89.60 136.46 101.75 103.97 50.62 51 ER17a ExonRegion 0 60.90 351.70 79.99 104.63 74.50 74.80 101.43 45.18 52.03 145.64 310.45 272.98 180.69 256.81 142.82 148.76 280.46 75.82 86.12 163.27 133.46 102.64 45.60 52 E17a_E18a KnownJunction 0 65.94 319.35 104.76 104.25 96.18 103.75 93.71 58.49 66.15 163.35 335.35 257.63 154.21 257.76 139.69 184.99 277.23 101.56 121.04 164.33 168.28 82.54 43.45 53 ER18a ExonRegion 0 32.10 152.82 83.34 106.02 76.14 84.83 65.54 52.23 52.46 127.28 224.04 275.11 175.39 236.03 127.54 160.70 227.47 92.59 83.86 133.58 114.18 73.56 56.93 54 E18a_E19a KnownJunction 0 42.90 109.39 118.98 117.07 100.59 96.88 80.46 59.93 71.61 143.63 284.44 189.81 218.82 285.07 176.03 182.69 246.84 114.04 114.17 164.97 133.56 107.40 84.08 55 ER19a ExonRegion 0 48.59 121.29 101.32 100.51 95.16 128.58 94.73 55.67 53.95 144.93 275.54 197.34 194.59 306.00 177.73 166.49 255.08 101.64 96.61 170.74 138.58 72.03 85.90 56 E19a_E20a KnownJunction 0 66.90 180.56 120.19 105.01 119.19 128.05 76.09 68.59 65.28 152.09 264.59 220.27 128.73 230.33 212.25 168.84 234.69 95.30 80.57 148.54 111.26 76.48 68.12 57 ER20a ExonRegion 0 80.49 164.96 98.96 97.91 81.62 118.75 92.33 59.68 53.93 152.83 230.64 152.30 176.45 267.39 144.37 169.70 219.01 100.71 81.10 144.21 116.23 78.28 79.16 58 E20a_E21a KnownJunction 0 89.72 211.02 137.75 124.56 115.20 160.99 118.27 54.18 47.80 155.32 240.90 213.22 194.95 241.33 162.80 199.35 223.84 72.29 105.60 130.33 71.60 69.26 104.23 59 ER21a ExonRegion 0 73.70 204.39 124.87 111.44 91.76 116.82 101.32 51.38 52.04 155.51 231.68 179.80 174.91 242.60 188.30 203.33 241.22 83.84 124.23 138.84 94.59 98.62 84.59 60 E21a_E22a KnownJunction 0 60.83 222.66 104.25 104.28 107.05 123.85 116.37 55.82 53.30 138.23 178.31 151.10 127.59 205.31 203.97 236.26 217.02 78.72 166.50 120.29 95.94 99.20 81.09 61 ER22a ExonRegion 0 75.62 188.48 116.69 119.83 137.76 151.62 98.57 58.27 53.93 149.91 255.64 241.33 160.17 238.43 170.56 195.53 206.86 74.22 119.40 137.27 92.36 108.00 67.54 62 E22a_E23a KnownJunction 0 118.32 205.03 127.17 131.32 134.97 202.21 145.74 73.11 60.82 165.09 300.44 365.82 193.49 242.81 160.33 206.95 233.57 73.79 125.56 148.42 112.37 104.28 81.18 63 ER23a ExonRegion 0 77.83 172.55 149.80 170.84 108.99 149.70 105.90 66.02 63.97 151.60 306.92 275.50 218.31 265.15 205.18 222.11 257.93 89.45 144.47 139.03 119.55 125.73 105.72 64 E23a_E24a KnownJunction 0 87.79 154.38 157.00 216.52 87.95 178.08 85.01 60.42 55.99 159.08 313.40 262.14 215.08 251.75 291.00 282.75 312.95 113.38 196.05 151.87 131.96 130.18 111.65 65 ER24a ExonRegion 0 60.81 137.77 127.59 162.78 94.65 119.46 84.26 71.87 55.86 161.83 303.47 218.37 186.04 218.41 210.28 229.60 249.42 84.73 141.88 157.71 129.24 119.37 68.46 66 E24a_E25a KnownJunction 0 67.49 162.34 87.08 86.74 122.92 141.74 85.72 60.17 41.52 116.69 262.28 260.03 114.93 173.88 159.96 133.04 201.22 51.15 86.31 141.13 95.14 104.59 27.15 67 Ix_AR1 ActiveIntronRegion 0 0.93 1.30 1.48 5.09 2.98 20.12 10.82 1.13 0.01 3.10 5.87 3.40 9.38 5.21 0.00 3.82 5.32 1.29 3.02 2.62 2.66 4.44 1.29 68 ER25a ExonRegion 0 76.82 144.20 123.76 132.60 127.10 138.08 84.97 67.57 56.23 136.77 245.30 353.25 157.54 248.42 164.18 135.43 184.02 61.61 125.03 116.73 122.36 100.96 63.67 69 E25a_E26a KnownJunction 0 138.32 138.73 134.32 165.48 180.05 122.43 133.81 55.33 57.70 113.25 224.32 423.14 224.99 318.03 185.92 187.56 179.99 50.74 169.04 135.63 153.21 117.02 91.25 70 E26_Aa NovelBoundary 0 17.78 18.29 4.97 11.35 8.66 10.22 18.33 15.85 9.92 14.16 17.48 36.31 52.27 11.83 4.45 7.78 8.98 0.00 0.00 3.26 3.15 11.76 0.00 71 ER26a ExonRegion 0 133.96 205.96 138.61 161.58 181.54 164.50 145.75 74.71 56.29 147.83 257.15 297.26 192.65 271.93 194.97 184.16 236.67 81.17 132.85 121.87 112.41 106.79 88.14 72 E26a_E27a KnownJunction 0 120.10 201.54 113.04 110.74 207.81 135.94 100.47 68.51 38.83 127.59 195.94 237.53 152.91 165.99 106.06 133.13 153.90 57.70 76.71 81.30 87.48 68.34 50.02 73 Ix Intron 0 12.46 8.51 8.18 9.63 10.30 5.98 9.37 5.82 4.16 8.86 10.24 10.55 12.34 8.13 8.41 9.25 7.34 3.54 6.49 8.43 3.26 5.71 3.59 74 Ix_SR1 SilentIntronRegion 0 14.25 8.81 9.37 10.52 10.58 6.65 10.35 6.43 4.07 8.93 9.65 9.65 10.69 7.12 8.17 8.82 5.91 2.60 4.80 7.61 2.70 6.08 3.04 75 E27_Aa NovelBoundary 0 27.93 9.14 26.46 17.61 11.21 4.32 23.58 7.89 7.55 12.11 7.00 12.45 11.85 9.83 17.55 0.00 0.00 1.62 8.75 5.88 2.72 19.23 4.35 76 ER27a ExonRegion 0 134.29 209.67 124.94 129.78 155.71 158.23 109.16 72.74 45.50 130.93 234.85 267.55 152.97 243.17 202.53 169.60 163.15 45.37 89.66 104.44 74.13 76.51 51.08 77 E27a_E28a KnownJunction 0 108.98 170.82 128.03 137.25 128.18 88.47 138.14 58.86 60.62 121.52 199.79 319.60 179.86 287.72 207.43 211.23 185.32 48.83 84.71 125.92 98.04 105.51 74.78 78 ER28a ExonRegion 0 83.32 169.82 99.12 115.47 94.32 84.49 78.86 49.52 41.82 111.74 117.77 179.29 94.00 102.25 125.93 72.71 71.51 23.06 45.80 70.45 27.32 61.02 23.98