Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-552M11.2 Gene 0 2.76 0.96 3.57 3.97 3.17 7.06 4.08 3.81 1.96 1.32 2.75 8.26 3.95 5.23 3.54 5.11 1.37 3.10 1.89 3.28 3.39 1.73 2.26 2 445680 Transcript 0 0.00 0.00 0.00 0.21 0.00 0.00 0.00 0.27 0.00 0.00 0.24 0.00 0.00 1.15 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.36 3 416099 Transcript 0 2.06 0.00 3.60 1.11 0.00 1.58 0.00 2.36 1.83 0.83 0.22 0.31 0.22 2.80 2.96 4.32 0.01 0.16 0.00 0.12 0.01 1.50 0.00 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.62 0.00 0.00 0.00 0.82 0.00 0.00 0.72 0.00 0.00 1.84 1.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.09 5 E1_Ab KnownBoundary 0 18.67 14.27 80.81 31.13 24.02 42.93 33.30 54.59 23.00 53.35 63.38 6.60 12.82 110.90 48.71 68.44 60.78 118.27 15.91 26.14 32.06 12.80 8.19 6 ER1b ExonRegion 0 0.00 0.00 0.00 0.21 0.00 0.00 0.00 0.21 0.00 0.00 0.00 1.88 0.00 0.51 0.00 0.00 0.00 0.10 0.00 0.00 0.00 0.00 0.00 7 E1_Da KnownBoundary 0 94.46 75.05 30.75 17.15 58.40 80.52 40.28 16.14 9.09 8.76 21.58 42.61 57.95 18.25 41.54 131.85 13.93 56.67 34.35 22.75 2.35 14.88 29.28 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1c ExonRegion 0 0.56 0.00 0.85 0.15 0.00 0.49 0.01 0.94 0.41 0.34 0.44 0.62 0.44 1.18 0.11 1.20 0.02 0.31 0.00 0.24 0.02 0.43 0.00 10 E1_Db NovelBoundary 0 231.30 155.24 280.53 131.65 233.36 150.71 142.42 131.52 46.47 116.02 275.91 83.43 112.98 429.57 442.06 285.91 202.80 138.33 118.12 188.56 75.18 87.01 91.17 11 E1b_E2a KnownJunction 0 3.56 0.00 6.36 2.06 0.00 2.67 0.00 3.78 3.24 1.32 0.00 0.00 0.00 4.41 5.81 7.43 0.00 0.00 0.00 0.00 0.00 2.57 0.00 12 I1 Intron 0 15.19 7.16 9.29 15.50 17.80 24.04 18.22 15.62 8.28 8.25 5.80 22.94 18.71 13.17 11.83 7.75 5.81 5.58 4.78 14.29 8.77 9.78 10.15 13 I1_AR1 ActiveIntronRegion 0 15.82 6.98 11.56 11.62 12.35 18.87 16.65 11.94 5.86 4.91 4.68 18.07 4.42 12.30 9.01 6.26 7.16 5.80 5.79 13.96 9.61 7.83 12.99 14 I1_AR2 ActiveIntronRegion 0 12.28 8.31 10.70 19.16 18.47 22.34 16.52 21.30 8.58 9.51 3.19 7.99 25.56 16.20 14.30 13.52 5.86 9.97 7.45 7.52 7.82 10.36 9.43 15 I1_AR3 ActiveIntronRegion 0 11.01 5.69 6.67 14.83 15.20 37.48 19.54 21.36 5.19 11.01 5.80 20.44 31.33 19.10 16.01 14.15 6.07 5.91 3.31 12.94 4.94 12.50 14.68 16 I1_AR4 ActiveIntronRegion 0 11.99 1.53 9.60 16.01 13.60 26.90 11.14 19.73 8.23 10.70 4.35 21.29 19.54 14.48 17.65 6.19 6.60 5.08 5.04 17.91 5.88 7.12 11.01 17 I1_SR1 SilentIntronRegion 0 9.74 7.86 12.55 16.60 21.41 30.97 17.12 18.40 8.51 10.53 3.14 22.03 21.16 10.39 16.44 10.17 1.69 2.79 5.66 24.78 11.31 5.05 11.16 18 I1_AR5 ActiveIntronRegion 0 7.06 10.85 12.87 16.24 37.24 26.13 16.99 22.18 11.32 17.68 4.67 25.62 36.35 14.35 20.31 9.66 0.00 0.15 6.37 22.16 8.26 10.59 10.03 19 I1_SR2 SilentIntronRegion 0 9.95 10.17 9.44 12.67 28.63 21.82 10.33 19.19 10.87 16.29 3.87 25.11 40.33 12.83 20.31 8.32 0.00 0.00 3.19 15.32 2.20 11.88 5.87 20 I1_AR6 ActiveIntronRegion 0 17.41 7.18 4.88 20.45 24.56 29.71 22.05 17.86 12.06 11.43 9.11 35.57 35.20 13.51 13.09 7.14 4.99 4.96 2.40 14.49 8.22 13.30 5.52 21 E2_Aa NovelBoundary 0 6.89 6.25 18.45 29.30 12.99 18.57 16.16 15.36 11.78 9.75 5.37 37.51 62.33 9.89 0.00 0.00 12.53 18.36 0.00 14.96 14.52 6.25 7.77 22 ER2a ExonRegion 0 11.41 4.46 14.48 17.47 14.67 31.52 18.86 14.70 8.10 5.27 11.13 35.85 17.25 19.78 14.99 20.76 6.28 13.54 8.73 14.58 15.66 6.98 9.66 23 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 IG26 Intergenic 0 13.85 9.33 12.73 20.72 20.70 35.85 26.90 17.95 6.88 8.28 6.57 24.72 18.99 15.49 11.47 13.14 12.35 6.72 10.02 17.72 12.17 12.22 11.48 25 IG26_AR1 ActiveIntergenicRegion 0 15.32 10.71 12.31 22.13 20.57 37.74 27.44 19.70 6.85 9.13 7.77 26.18 19.11 16.57 11.82 16.42 12.14 6.91 11.24 17.35 12.66 11.58 11.34 26 IG26_SR1 SilentIntergenicRegion 0 9.53 5.24 14.17 16.65 21.37 30.55 25.58 12.83 7.07 5.77 2.97 20.59 18.89 12.37 10.58 3.23 13.14 6.22 6.41 19.11 10.85 14.33 12.07