Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP4-735C1.1 Gene 0 0.10 0.49 0.70 2.43 1.02 0.88 0.70 1.36 2.64 1.14 0.00 0.34 0.00 0.00 0.00 0.00 0.00 0.00 0.91 1.32 1.48 1.30 1.69 2 429410 Transcript 0 0.00 0.00 0.00 0.20 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.31 0.00 0.43 0.73 0.28 3 431955 Transcript 0 0.10 0.49 0.71 2.02 0.87 0.88 0.67 1.37 2.43 0.99 0.00 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.57 1.34 0.54 0.69 0.66 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E2_Aa NovelBoundary 0 0.00 0.00 16.53 13.45 0.00 8.69 11.75 9.36 25.84 13.57 0.00 6.00 0.00 0.00 0.00 0.00 0.00 26.41 0.00 9.78 2.53 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.00 0.00 3.36 0.55 0.04 0.54 0.00 3.39 2.45 0.00 1.46 0.00 0.00 0.00 0.00 0.00 0.00 0.65 0.00 1.38 0.02 0.65 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E3_Aa NovelBoundary 0 0.00 19.08 1.71 28.60 11.54 2.73 3.80 14.01 24.22 16.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.14 0.00 19.81 0.00 3.00 8.71 10 ER3a ExonRegion 0 0.61 2.95 4.23 8.73 4.65 5.26 3.42 8.21 11.20 3.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.77 8.01 1.88 3.60 3.34 11 E3_Da NovelBoundary 0 0.00 12.23 3.67 21.28 3.90 5.39 1.94 5.87 15.54 13.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.47 11.86 10.99 2.59 0.00 6.83 12 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 I3 Intron 0 0.74 13.32 10.37 34.37 15.20 15.62 5.83 23.44 14.83 17.23 0.00 0.62 0.00 0.00 0.00 0.00 0.00 4.79 4.25 10.23 0.77 3.02 4.77 14 I3_AR1 ActiveIntronRegion 0 0.45 13.34 13.29 41.60 19.84 12.77 5.72 27.67 18.99 18.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.32 3.41 9.54 0.94 3.16 4.09 15 I3_SR2 SilentIntronRegion 0 1.07 13.28 6.93 25.86 9.73 18.98 5.96 18.45 9.92 15.52 0.00 1.35 0.00 0.00 0.00 0.00 0.00 4.17 5.23 11.05 0.56 2.85 5.56 16 E4_Aa NovelBoundary 0 25.86 50.78 40.42 35.69 25.89 75.47 36.74 2.22 47.95 25.14 0.00 18.61 0.00 0.00 0.00 0.00 0.00 23.92 12.24 37.14 20.39 60.68 69.23 17 ER4a ExonRegion 0 0.00 0.00 0.00 0.04 0.00 0.00 0.03 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 0.00 18 E4_Da NovelBoundary 0 34.01 692.18 281.36 158.69 99.66 147.19 131.69 122.15 82.72 217.66 0.00 30.61 0.00 2.24 0.00 0.00 0.00 77.89 175.72 124.89 93.10 439.66 170.04 19 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER5a ExonRegion 0 0.00 0.00 0.00 0.57 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.90 0.00 3.73 1.39 4.96 21 E5_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.06 0.00 22 ER5b ExonRegion 0 0.00 0.00 0.00 0.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 0.00 1.28 2.19 0.85