Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AHCYL1 Gene 0 181.85 220.36 210.28 216.62 218.86 165.76 177.32 183.57 157.95 228.65 275.68 250.32 264.06 316.46 187.84 248.53 272.65 151.98 183.05 169.80 242.71 407.98 283.68 2 369799 Transcript 0 218.27 196.91 217.64 210.20 207.63 132.84 155.15 155.75 115.44 168.05 178.82 186.92 165.12 173.20 173.93 146.23 154.15 65.40 120.49 99.97 106.78 292.50 160.00 3 393614 Transcript 0 0.00 0.00 0.00 0.00 0.67 0.00 0.00 0.00 1.24 1.15 0.00 2.16 0.00 0.00 0.00 2.97 0.00 1.85 0.00 0.00 0.00 0.00 0.00 4 475081 Transcript 0 3.04 0.00 1.15 1.96 0.00 5.45 2.25 1.89 1.33 1.34 2.63 0.00 6.82 2.35 4.45 15.30 0.00 2.57 0.00 0.00 6.24 0.00 4.35 5 359172 Transcript 1 0.50 0.00 0.73 0.00 0.21 0.00 1.78 0.20 0.16 0.27 3.73 0.91 47.33 20.54 11.94 1.21 44.60 1.02 0.25 0.85 3.79 3.04 3.08 6 481423 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 469401 Transcript 1 6.95 23.96 6.22 16.45 17.85 22.59 24.48 15.69 16.19 14.13 8.90 5.64 13.44 17.37 3.26 12.21 17.58 21.90 19.64 22.61 11.80 32.67 21.85 8 ER1a ExonRegion 0 0.00 0.00 0.11 0.00 0.24 0.77 0.88 0.00 0.00 0.71 3.83 0.00 0.00 0.45 2.33 0.46 0.11 0.00 0.78 1.12 5.22 1.88 3.97 9 E1_Ab KnownBoundary 0 0.00 0.00 4.32 3.36 0.00 7.78 4.02 0.00 1.30 3.98 22.80 0.00 0.00 6.24 4.33 6.84 0.00 11.15 9.22 20.13 34.41 8.45 15.37 10 ER1b ExonRegion 0 2.58 4.11 3.46 2.73 2.47 13.72 4.46 1.26 7.49 13.26 49.60 6.95 5.55 46.22 22.71 34.61 48.80 20.83 24.41 17.38 76.57 19.67 39.77 11 E1_Ac KnownBoundary 0 0.00 2.89 7.30 11.12 8.06 10.51 9.45 5.91 19.07 23.18 39.12 6.15 12.66 126.08 102.36 137.49 73.02 80.42 38.87 23.20 60.42 74.03 185.75 12 ER1c ExonRegion 1 12.75 45.46 31.31 32.44 23.84 55.05 41.56 43.93 66.58 91.39 153.77 36.51 35.10 173.15 62.50 182.23 118.71 157.11 99.76 93.58 210.07 140.03 209.77 13 E1a_E3a KnownJunction 0 23.49 45.19 62.39 73.88 79.29 109.77 90.22 106.79 135.21 217.04 275.07 134.89 118.99 276.71 113.85 178.50 239.36 232.76 157.09 157.43 380.55 203.97 255.41 14 ER2a ExonRegion 0 1.01 0.00 1.45 0.00 0.43 0.00 3.57 0.41 0.31 0.55 4.78 1.82 19.67 21.54 8.93 2.42 34.51 2.04 0.51 1.69 4.43 3.69 6.17 15 E2a_E3a KnownJunction 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 75.00 19.54 14.96 0.00 54.70 0.00 0.00 0.00 3.15 2.39 0.00 16 ER3a ExonRegion 0 22.53 55.63 97.96 97.47 65.10 84.65 75.06 134.06 142.28 213.98 348.03 125.28 215.45 429.07 137.06 278.69 367.34 274.13 207.87 190.52 439.48 311.00 342.41 17 E3a_E4a KnownJunction 1 19.63 57.95 139.85 140.08 68.59 71.10 54.28 135.26 168.89 256.16 372.67 176.76 194.79 552.01 160.95 428.43 410.19 364.62 233.98 305.52 449.86 392.57 419.65 18 ER4a ExonRegion 0 30.29 72.38 116.86 122.42 91.90 123.53 82.87 147.97 156.36 248.45 367.94 200.00 216.88 505.29 156.87 397.50 398.58 301.27 193.16 213.24 481.20 393.13 423.28 19 E4_Da NovelBoundary 0 13.41 5.46 9.14 13.15 3.65 5.00 12.54 21.03 25.03 27.86 11.85 0.00 13.64 25.02 4.45 43.24 46.28 44.81 8.00 30.94 20.26 30.19 26.63 20 E4a_E5a KnownJunction 0 20.74 138.99 105.29 130.82 99.58 157.41 145.47 166.31 130.67 227.20 330.08 203.92 210.54 514.98 173.93 436.21 378.12 282.30 178.83 218.72 554.33 417.92 371.33 21 E4a_E5b KnownJunction 0 3.04 0.00 1.15 1.96 0.00 5.45 2.25 1.89 1.33 1.34 2.63 0.00 6.82 2.35 4.45 15.30 0.00 2.57 0.00 0.00 6.24 0.00 4.35 22 E5_Ab NovelBoundary 1 61.34 156.42 77.26 102.52 136.25 183.59 178.86 112.30 143.86 194.29 333.14 288.99 376.27 665.67 187.65 428.09 419.92 258.83 177.70 248.13 427.62 314.07 410.17 23 ER5a ExonRegion 1 38.75 135.31 96.85 98.08 114.13 164.62 150.98 131.56 134.01 209.93 332.53 266.10 308.28 618.79 159.01 431.30 427.47 288.53 181.44 229.13 523.64 361.17 409.44 24 ER5b ExonRegion 0 35.33 114.91 113.01 85.04 124.40 135.16 120.83 105.83 151.03 215.36 347.54 224.44 232.00 473.72 143.94 350.75 360.15 292.29 219.58 182.24 444.77 333.92 321.27 25 E5a_E6a KnownJunction 0 42.23 110.57 118.77 79.51 153.31 78.53 98.84 128.68 156.88 242.05 329.45 218.62 197.06 499.38 210.27 376.57 370.64 312.93 222.22 193.41 452.95 431.70 303.81 26 ER6a ExonRegion 0 43.48 79.98 87.24 82.73 98.20 117.59 78.74 116.06 161.31 207.85 299.07 202.60 202.31 512.97 166.22 291.90 359.57 266.97 182.43 202.89 447.40 355.15 323.54 27 E6a_E7a KnownJunction 0 57.34 125.70 115.16 95.53 111.46 162.69 82.36 130.53 175.58 209.28 316.50 136.39 167.20 333.81 211.14 252.58 340.07 229.82 152.00 220.00 507.07 286.51 242.18 28 ER7a ExonRegion 0 50.71 101.72 86.15 71.60 78.47 134.52 79.13 121.54 143.98 180.49 278.22 151.39 187.40 400.54 147.99 278.75 331.20 249.37 204.94 184.97 420.42 366.46 324.82 29 E7a_E8a KnownJunction 0 69.49 121.82 63.19 82.94 92.53 122.77 94.73 134.60 115.65 183.87 304.76 194.61 180.83 470.54 218.43 307.78 385.23 220.16 173.18 194.50 385.98 419.69 337.87 30 E7a_E9a NovelJunction 0 0.00 18.55 30.40 35.89 7.81 5.05 24.55 21.93 32.32 22.94 11.90 0.00 0.00 24.78 10.14 3.59 4.21 36.60 4.61 29.40 14.02 14.94 7.00 31 ER8a ExonRegion 0 79.10 128.65 90.90 103.76 124.03 176.30 149.93 150.26 128.56 206.49 365.06 241.48 271.76 479.36 162.93 265.60 407.55 191.48 205.23 206.16 451.00 425.54 339.69 32 E8a_E9a KnownJunction 0 48.60 59.92 117.62 138.44 119.69 86.31 80.55 168.57 140.51 207.86 240.11 80.13 142.36 178.59 112.62 159.10 280.13 139.16 148.33 179.35 283.31 273.53 212.30 33 ER9a ExonRegion 0 49.73 149.63 127.53 165.24 146.85 163.33 158.14 186.42 164.64 282.14 370.26 282.78 343.45 431.17 149.58 297.77 406.55 250.16 216.58 225.40 460.39 502.98 417.00 34 E9a_E10a KnownJunction 0 86.31 166.75 203.95 168.24 262.05 258.83 248.46 237.45 180.38 281.76 400.73 459.90 643.14 583.56 173.44 307.01 454.04 288.23 310.03 261.42 503.49 552.45 458.49 35 ER10a ExonRegion 0 56.85 144.23 154.97 167.19 171.87 140.00 127.33 202.61 169.46 287.17 366.86 409.41 525.72 484.57 168.68 358.88 334.27 268.59 248.11 244.71 448.42 501.15 436.55 36 E10a_E11a KnownJunction 1 52.45 174.18 129.00 196.25 71.22 109.65 91.64 211.53 180.50 334.78 315.45 188.76 511.98 293.37 207.55 343.50 244.13 265.43 167.91 228.76 421.75 432.92 427.07 37 E11_Aa NovelBoundary 0 3.56 12.17 12.80 21.51 12.73 7.72 23.45 18.65 24.80 16.01 7.58 6.30 6.49 11.95 10.38 8.29 0.00 61.77 13.27 17.96 3.15 13.96 16.05 38 ER11a ExonRegion 0 74.53 190.24 171.00 210.44 146.47 177.20 155.39 236.74 190.61 333.68 387.93 278.98 433.54 498.97 220.92 372.32 422.77 261.47 224.59 242.41 477.16 564.38 522.13 39 E11a_E12a KnownJunction 0 120.10 228.84 203.48 217.26 186.67 183.36 196.83 216.38 212.38 306.33 393.47 403.03 390.56 448.70 137.96 329.66 387.94 266.26 218.55 258.86 538.76 399.67 338.55 40 ER12a ExonRegion 0 93.75 232.11 190.93 190.88 190.35 217.19 174.50 195.10 202.54 289.49 405.80 328.92 413.85 462.81 179.02 347.78 354.27 329.76 256.00 270.03 457.04 531.80 489.34 41 E12a_E13a KnownJunction 0 191.29 243.44 212.91 211.16 310.10 284.27 293.81 247.06 242.13 342.33 402.79 366.87 619.60 546.77 308.30 489.44 405.61 387.80 271.91 349.95 449.99 692.06 482.98 42 E12a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER13a ExonRegion 1 173.38 267.35 224.00 258.97 304.63 332.38 298.73 238.47 238.40 349.04 460.93 340.58 722.19 605.26 285.24 569.31 474.23 511.58 329.15 340.14 563.45 765.83 624.33 44 E13_Ab KnownBoundary 1 243.38 340.14 250.08 307.35 349.07 423.56 423.87 231.82 245.25 364.19 504.92 373.62 1013.89 815.06 394.09 653.85 572.70 552.70 490.27 407.66 669.17 844.84 815.13 45 ER13b ExonRegion 0 128.74 200.57 193.40 246.92 178.51 267.73 215.43 194.62 214.20 315.50 430.26 338.32 620.96 619.86 272.72 486.15 475.71 417.22 388.98 326.26 565.79 611.66 580.45 46 E13a_E14a KnownJunction 0 151.95 147.41 194.76 226.11 141.94 208.40 139.95 193.09 204.92 300.48 371.30 346.01 479.51 499.62 253.66 408.10 451.80 308.21 317.84 305.01 481.37 455.45 404.88 47 ER14a ExonRegion 0 64.41 147.86 167.97 172.23 132.49 173.53 140.91 155.96 192.04 256.49 311.29 329.26 442.38 424.55 211.00 385.96 374.07 347.25 263.74 252.80 482.08 529.80 459.87 48 E14_Da KnownBoundary 0 3.56 9.54 4.70 3.86 16.13 25.16 21.90 17.09 11.43 8.95 4.69 12.90 20.62 8.01 0.00 4.27 25.99 27.73 21.93 23.91 6.30 33.31 11.61 49 E14a_E14b KnownJunction 0 47.86 145.30 174.30 181.36 117.91 278.25 212.95 145.28 176.21 251.59 251.96 287.34 396.40 380.78 219.05 411.17 387.19 317.78 403.02 231.96 377.40 641.79 441.75 50 ER14b ExonRegion 0 6.95 23.96 6.22 16.45 17.85 22.59 24.48 15.69 16.19 14.13 8.90 5.64 13.44 17.37 3.26 12.21 17.58 21.90 19.64 22.61 11.80 32.67 21.85 51 E14_Ab KnownBoundary 0 22.89 72.09 9.40 21.84 26.74 58.60 56.88 18.69 22.08 18.99 13.90 0.00 21.26 25.90 10.88 22.81 25.06 44.44 44.80 22.63 27.55 49.35 23.13 52 ER14c ExonRegion 0 90.14 177.60 157.00 177.31 184.56 270.74 196.52 184.68 196.64 295.46 350.20 324.60 401.66 417.36 150.20 379.29 465.34 252.24 313.55 255.65 459.11 485.46 377.02 53 E14_Db NovelBoundary 0 112.91 182.60 168.59 208.33 265.87 226.35 191.05 208.70 228.47 335.83 358.30 164.15 322.38 369.01 128.93 284.11 399.25 150.35 243.49 254.90 440.10 343.83 274.19 54 E14c_E15a KnownJunction 1 151.88 226.80 173.06 222.75 302.63 255.19 264.36 239.58 225.61 302.44 387.94 274.14 608.40 438.46 166.88 423.05 328.19 187.04 357.94 290.12 438.06 374.81 543.68 55 ER14d ExonRegion 0 80.65 131.48 151.23 190.99 174.38 155.49 157.28 197.16 211.12 289.69 298.47 179.75 354.83 311.16 107.85 228.75 292.30 144.51 175.63 246.59 357.15 260.01 279.59 56 ER15a ExonRegion 0 85.36 145.80 186.21 224.74 190.05 217.55 155.32 225.22 220.41 280.18 320.13 290.02 504.39 535.77 295.01 401.80 350.31 200.31 286.72 260.33 357.89 593.99 501.98 57 E15a_E16a KnownJunction 0 140.54 177.14 237.31 303.62 236.59 291.03 135.58 291.38 253.85 376.90 496.81 306.85 367.02 569.02 307.44 463.13 524.54 286.32 516.72 311.15 395.50 931.30 796.61 58 E15a_E18a NovelJunction 0 6.22 18.09 12.18 10.39 0.00 15.16 13.91 15.98 8.65 7.90 9.95 0.00 0.00 5.00 5.69 3.67 13.28 35.28 24.47 46.15 3.03 13.90 7.43 59 I15 Intron 0 18.59 41.25 16.87 33.03 38.36 35.64 43.21 27.29 31.81 27.60 15.12 23.02 19.98 17.90 9.59 16.67 16.46 28.90 24.19 37.26 17.60 44.52 19.30 60 I15_AR1 ActiveIntronRegion 0 18.63 41.34 16.90 33.10 38.45 35.72 43.31 27.36 31.88 27.66 15.15 23.07 20.02 17.94 9.61 16.71 16.50 28.96 24.24 37.34 17.64 44.61 19.35 61 E16_Aa NovelBoundary 0 77.35 101.17 38.02 76.98 107.56 82.91 102.59 82.89 84.40 71.72 23.74 0.00 0.00 31.08 15.58 79.98 27.12 119.05 96.10 76.83 35.77 133.73 91.08 62 ER16a ExonRegion 0 104.64 155.75 182.91 239.95 266.76 254.22 187.37 240.91 230.04 299.55 444.44 318.99 419.62 451.77 186.18 394.16 449.41 209.30 319.83 245.51 349.35 612.16 493.33 63 E16_Da NovelBoundary 0 6.89 39.93 39.86 61.43 49.32 42.99 38.11 41.24 50.03 36.18 12.06 40.96 13.80 30.14 8.90 25.55 8.04 30.72 42.82 52.41 25.02 60.93 44.64 64 E16a_E18a KnownJunction 0 183.29 133.53 271.22 304.06 204.50 259.74 220.11 291.50 278.50 365.78 414.10 298.90 508.57 435.34 238.95 367.60 497.52 202.91 313.33 228.06 201.46 852.37 437.06 65 I16 Intron 0 7.90 32.06 15.14 27.79 21.08 43.34 31.84 14.95 16.03 15.59 13.62 24.92 18.99 21.79 14.79 22.18 10.95 30.86 15.85 21.17 17.34 35.42 17.05 66 I16_AR1 ActiveIntronRegion 0 7.96 32.32 15.26 28.02 21.25 43.70 32.10 15.06 16.16 15.72 13.74 25.13 19.14 21.97 14.91 22.34 11.04 31.11 15.98 21.35 17.49 35.71 17.19 67 ER17a ExonRegion 0 0.00 0.00 0.00 0.00 0.67 0.00 0.00 0.00 1.24 1.15 0.00 2.16 0.00 0.00 0.00 2.97 0.00 1.85 0.00 0.00 0.00 0.00 0.00 68 E18_Aa NovelBoundary 0 103.43 92.48 66.17 106.31 124.70 80.98 69.69 92.79 79.14 66.05 14.06 12.45 19.64 49.27 35.23 39.56 21.13 80.79 41.88 40.72 27.55 72.81 47.55 69 ER18a ExonRegion 0 212.81 371.10 259.90 293.43 343.20 220.51 269.83 252.23 222.37 330.56 380.51 464.74 440.32 393.66 188.37 295.32 359.79 114.48 216.33 253.75 165.24 606.04 338.16 70 E18_Da KnownBoundary 0 293.53 488.47 386.12 445.20 458.57 257.47 380.82 321.57 294.44 335.85 357.46 434.69 256.31 389.67 266.27 440.74 390.46 243.79 335.54 354.61 362.88 657.77 507.91 71 ER18b ExonRegion 0 267.33 463.25 297.10 327.94 360.25 210.00 292.62 261.85 226.70 311.11 351.39 351.77 317.49 411.46 208.46 339.52 364.70 174.73 247.09 219.57 277.45 563.64 357.68 72 E18_Db KnownBoundary 0 187.89 138.59 29.27 44.68 156.96 76.26 138.27 34.05 22.54 35.00 100.39 70.97 140.41 109.60 94.94 59.30 91.72 18.74 38.68 34.32 54.80 131.47 75.80 73 ER18c ExonRegion 0 436.55 393.83 435.17 420.40 415.02 264.91 309.42 311.50 230.89 335.39 353.81 373.84 330.25 345.94 345.52 291.99 308.19 130.80 240.19 198.83 208.35 583.13 316.04