Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	EXTL2	Gene	0	33.67	69.90	54.71	60.69	45.76	119.06	51.57	35.90	45.89	68.01	38.46	64.55	62.84	51.80	66.66	34.26	35.95	32.52	45.75	60.95	59.18	138.12	60.95
2	434109	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	370114	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	370113	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	416479	Transcript	0	0.85	0.00	0.00	0.00	2.68	0.00	1.90	0.00	0.00	0.00	4.48	12.41	5.63	5.22	0.00	1.24	3.81	1.21	0.00	1.88	2.79	4.38	7.98
6	480774	Transcript	1	5.54	2.41	2.76	5.01	4.95	3.31	7.66	3.41	1.53	3.24	7.06	22.75	70.75	24.12	5.45	7.02	10.94	2.56	3.41	13.28	8.57	15.61	9.15
7	494907	Transcript	0	1.88	0.99	0.89	0.66	0.22	1.63	4.50	1.87	0.60	1.12	5.32	18.53	24.29	9.15	2.09	3.61	11.09	1.04	3.09	8.60	1.96	9.06	5.46
8	450240	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	2.04	2.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.76	7.85
9	ER1a	ExonRegion	0	1.75	4.01	5.48	3.54	3.66	20.50	6.25	2.59	5.77	6.15	10.37	2.85	3.38	6.37	4.48	5.07	6.00	7.54	9.38	11.80	8.06	4.53	5.28
10	E1_Ab	KnownBoundary	0	0.00	9.08	0.00	0.00	0.00	5.39	0.00	0.00	0.00	2.74	6.74	0.00	0.00	0.00	6.30	12.05	0.00	2.03	3.76	2.62	16.00	14.21	7.34
11	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1_Ad	KnownBoundary	0	10.08	40.91	13.90	17.41	11.04	137.02	22.96	13.88	20.46	25.89	4.79	0.00	0.00	26.31	20.52	11.36	41.98	31.67	17.04	29.08	70.98	59.03	35.08
13	ER1b	ExonRegion	1	19.05	65.07	12.25	14.99	18.73	205.39	21.18	13.83	17.29	25.23	11.60	4.33	4.69	45.48	34.82	26.75	62.72	25.87	25.48	44.68	107.98	79.17	85.16
14	ER1c	ExonRegion	0	17.28	69.82	12.25	14.99	21.41	236.25	25.16	15.56	17.29	27.14	16.11	4.33	4.69	50.35	40.13	32.69	69.32	30.80	27.61	52.13	127.45	89.59	101.80
15	ER1d	ExonRegion	0	10.12	49.36	12.88	14.43	27.06	122.54	33.03	20.73	23.10	34.93	25.97	16.44	43.19	45.89	36.59	32.38	55.40	33.93	33.24	63.06	114.06	87.93	96.29
16	E1_Ae	KnownBoundary	1	0.00	22.04	6.36	5.79	0.00	47.36	15.68	18.73	14.21	23.10	30.69	37.81	53.24	20.95	15.20	16.41	82.84	4.89	22.97	37.71	126.27	23.51	24.67
17	E1_Af	KnownBoundary	1	0.00	2.96	17.24	9.92	22.16	60.48	14.09	21.32	22.08	33.42	33.96	6.30	0.00	18.78	16.94	16.32	58.06	23.79	21.93	37.97	171.56	76.36	28.68
18	ER1e	ExonRegion	1	0.00	17.70	15.28	9.78	14.64	64.83	15.34	29.38	25.86	40.55	43.32	25.21	22.90	27.71	20.99	22.90	95.53	23.37	32.60	53.57	191.85	71.94	43.70
19	E1a_E2a	KnownJunction	0	0.00	3.35	1.74	9.16	4.07	11.41	0.00	11.62	18.89	16.82	2.00	6.30	6.49	14.42	10.75	6.84	8.70	16.58	9.60	8.44	37.62	45.93	35.34
20	E1a_E2b	KnownJunction	0	0.00	17.37	22.86	28.77	18.85	77.63	31.18	26.70	29.20	49.99	38.59	18.91	0.00	61.51	47.10	38.20	41.42	63.22	80.00	119.14	102.67	132.82	106.36
21	ER1f	ExonRegion	1	0.00	14.43	20.52	25.63	23.22	70.87	21.65	34.07	37.53	53.42	41.09	19.27	1.97	54.02	37.25	29.91	71.13	55.02	60.73	86.82	180.42	135.90	87.15
22	I1	Intron	0	0.48	0.97	0.78	0.41	1.00	0.82	3.77	1.54	0.55	1.41	3.28	13.11	23.41	9.04	2.00	2.82	5.11	1.82	1.19	8.88	3.91	5.88	3.23
23	I1_AR1	ActiveIntronRegion	0	0.54	0.97	0.17	0.00	0.68	0.64	0.34	0.66	0.13	0.64	1.31	12.58	18.10	6.38	0.41	3.03	0.84	2.47	0.81	7.64	0.98	3.03	0.75
24	I1_SR1	SilentIntronRegion	0	0.47	0.97	0.84	0.45	1.04	0.85	4.15	1.64	0.60	1.50	3.50	13.19	24.03	9.34	2.17	2.80	5.59	1.75	1.24	9.03	4.24	6.20	3.50
25	E2_Aa	NovelBoundary	1	0.00	0.00	0.00	6.09	4.16	2.61	3.97	7.52	1.62	0.00	2.68	12.00	121.91	7.95	4.45	0.00	0.00	4.48	4.24	3.26	0.00	9.37	8.62
26	ER2a	ExonRegion	1	0.63	1.98	5.27	10.24	3.04	17.35	5.22	10.60	21.50	22.29	4.23	34.75	44.87	23.75	11.37	9.08	8.74	20.82	18.51	16.33	29.24	82.50	61.43
27	E2_Ab	KnownBoundary	1	3.04	0.00	7.51	9.52	0.00	23.68	14.66	5.09	24.88	24.20	4.42	26.11	102.10	26.49	17.80	12.90	12.53	20.35	26.26	22.82	17.79	110.16	72.99
28	ER2b	ExonRegion	0	9.76	14.29	22.06	36.29	20.05	109.98	24.24	38.53	44.40	61.63	38.01	79.43	92.68	92.94	54.20	74.98	50.53	91.65	75.60	103.66	112.68	172.04	169.93
29	E2_Da	KnownBoundary	1	0.00	6.51	1.63	5.53	14.94	0.00	2.12	6.53	0.00	5.29	7.21	37.81	135.71	11.71	4.45	7.09	16.08	9.53	0.00	14.57	5.44	25.11	3.84
30	E2a_E3a	KnownJunction	0	3.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.77	0.00	0.00	0.00	0.00	0.00	0.00
31	E2a_E4a	KnownJunction	0	0.00	0.00	1.21	3.80	0.00	0.00	0.00	2.26	2.95	1.53	2.68	0.00	0.00	2.47	6.18	0.00	3.74	0.00	0.00	0.00	0.00	2.45	12.38
32	E2a_E5a	KnownJunction	0	12.97	30.39	17.03	33.90	57.47	261.16	32.95	32.86	44.39	39.89	37.38	51.02	31.00	43.79	45.49	51.78	70.97	63.80	53.46	53.63	143.82	141.69	115.84
33	ER2c	ExonRegion	1	5.54	2.41	2.76	5.01	4.95	3.31	7.66	3.41	1.53	3.24	7.06	22.75	70.75	24.12	5.45	7.02	10.94	2.56	3.41	13.28	8.57	15.61	9.15
34	E2_Db	NovelBoundary	0	0.00	5.85	2.96	6.89	7.64	0.00	11.61	6.57	1.79	0.00	12.95	37.96	30.52	25.60	8.90	13.07	12.16	1.87	0.00	23.07	4.82	13.04	8.11
35	I2	Intron	0	1.71	2.95	2.95	1.30	2.54	2.51	6.16	3.95	2.41	2.48	9.65	29.93	46.23	18.80	5.34	7.79	12.24	3.87	2.75	15.13	7.43	9.99	10.56
36	I2_SR1	SilentIntronRegion	0	1.71	2.95	2.95	1.30	2.54	2.51	6.17	3.95	2.41	2.48	9.65	29.94	46.26	18.81	5.34	7.79	12.25	3.87	2.75	15.14	7.44	10.00	10.57
37	E3_Aa	NovelBoundary	0	2.82	0.00	1.12	2.06	0.00	7.50	9.54	9.20	4.92	0.00	10.06	49.37	52.27	22.37	9.27	12.73	9.26	0.00	0.00	18.15	0.00	6.18	0.00
38	ER3a	ExonRegion	1	0.12	1.98	1.77	1.32	0.43	3.27	8.99	3.75	1.19	2.24	10.64	37.07	48.58	18.30	4.17	7.22	17.41	2.09	6.19	17.20	3.92	18.12	10.93
39	E3_Da	NovelBoundary	0	3.78	3.16	3.08	0.00	8.06	5.45	4.50	9.69	0.00	2.74	25.80	58.97	89.28	21.84	4.45	24.61	3.74	0.00	9.32	28.70	14.21	20.64	3.59
40	I3	Intron	0	1.50	3.64	0.84	2.82	3.36	9.23	8.84	4.53	6.15	6.88	14.31	36.08	70.69	26.38	5.16	11.32	14.95	5.04	4.10	16.93	9.88	25.25	15.64
41	I3_SR1	SilentIntronRegion	1	0.74	2.38	0.64	1.42	1.72	3.21	6.15	1.88	2.04	3.20	11.23	24.26	64.79	27.11	5.20	11.37	12.44	4.35	3.63	13.30	10.49	11.93	13.64
42	I3_AR1	ActiveIntronRegion	1	0.64	1.89	1.30	2.99	3.40	6.68	6.25	3.46	4.16	3.95	12.50	19.54	36.45	24.59	1.74	8.35	14.10	4.15	2.95	11.85	9.84	21.87	16.88
43	I3_SR3	SilentIntronRegion	1	1.47	3.68	1.10	1.91	4.34	6.04	9.25	6.56	7.32	11.51	18.75	46.80	56.55	17.06	0.66	6.06	17.53	8.13	4.98	17.05	9.18	31.95	7.66
44	I3_AR2	ActiveIntronRegion	1	2.27	4.97	0.87	3.90	4.54	14.58	11.43	6.63	9.62	10.00	16.73	47.86	83.41	26.85	6.17	12.28	16.88	5.55	4.65	20.77	9.49	35.68	17.47
45	E4_Aa	NovelBoundary	0	0.00	5.39	1.83	4.13	12.48	15.56	19.65	12.40	9.03	5.64	16.37	49.07	39.77	21.96	4.45	15.21	13.65	3.65	4.52	12.21	19.21	34.72	4.35
46	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	2.04	2.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.76	7.85
47	ER4a	ExonRegion	0	2.12	0.00	0.00	2.73	4.46	0.38	3.31	3.10	1.96	1.15	12.64	23.99	17.39	11.98	2.30	2.97	3.85	0.00	0.00	4.17	5.88	12.24	29.86
48	E4_Db	NovelBoundary	1	0.00	15.66	0.00	8.62	11.38	15.67	5.39	8.46	1.56	2.61	28.27	34.51	49.35	47.97	0.00	18.88	7.76	9.95	4.42	33.11	5.37	42.19	11.52
49	E4b_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.55	1.74	0.00	0.00	0.00	0.00	0.00
50	ER4b	ExonRegion	0	1.69	0.00	0.00	0.00	5.35	0.00	3.80	0.00	0.00	0.00	8.96	24.82	11.26	10.45	0.00	2.48	4.07	0.68	0.00	3.76	5.58	8.75	15.96
51	I4	Intron	0	5.79	6.20	2.69	3.42	7.32	23.14	17.12	7.31	10.45	14.73	10.77	56.84	59.66	24.76	8.17	15.00	19.78	4.26	3.01	19.46	9.27	39.88	19.15
52	I4_AR1	ActiveIntronRegion	0	5.80	6.21	2.69	3.42	7.33	23.19	17.16	7.32	10.47	14.76	10.79	56.95	59.78	24.81	8.18	15.03	19.83	4.27	3.02	19.50	9.29	39.96	19.18
53	E5_Aa	NovelBoundary	0	10.74	12.56	7.95	4.13	20.12	13.17	18.20	13.06	10.07	19.26	22.32	36.76	35.39	20.13	13.35	29.82	33.38	10.90	8.38	33.75	25.51	39.99	36.11
54	ER5a	ExonRegion	0	23.03	74.56	32.27	49.78	41.80	168.31	61.62	35.03	63.53	76.99	71.64	95.03	92.48	108.69	68.31	60.44	70.84	77.22	92.74	98.68	144.65	194.46	119.07
55	E5_Da	KnownBoundary	0	26.67	48.87	68.39	61.43	27.59	294.26	101.22	34.50	65.86	87.09	61.33	66.92	85.55	122.49	99.51	42.38	74.24	79.84	84.14	121.38	177.12	156.64	112.34
56	ER5b	ExonRegion	0	18.46	45.64	57.85	60.32	36.40	195.07	64.47	38.79	67.18	88.93	50.84	111.36	60.64	124.53	80.70	57.16	76.46	70.64	66.23	101.98	175.12	188.78	121.70
57	E5b_E6a	KnownJunction	0	17.11	66.37	59.49	67.22	48.81	180.01	56.00	43.83	68.52	90.26	59.65	131.89	79.54	126.85	71.33	88.18	50.40	79.59	80.00	110.64	172.61	253.14	144.01
58	I5	Intron	0	1.41	7.64	2.44	1.86	2.90	11.63	7.30	3.87	5.07	8.13	8.71	16.77	19.07	12.12	5.87	4.47	5.79	2.23	1.06	6.22	2.58	12.00	8.82
59	I5_AR1	ActiveIntronRegion	0	0.00	8.60	1.45	1.61	1.74	6.81	5.96	4.27	0.67	1.67	10.51	4.40	9.88	9.92	4.66	4.64	3.30	1.85	0.00	2.93	2.77	9.38	9.34
60	I5_AR2	ActiveIntronRegion	0	0.00	13.73	3.68	2.73	5.35	8.25	11.92	5.19	3.71	4.30	14.01	12.99	4.69	16.85	8.70	2.97	6.60	3.70	0.00	8.51	2.20	9.12	5.87
61	I5_SR1	SilentIntronRegion	0	2.18	10.55	2.18	0.96	2.41	12.43	8.79	5.09	5.45	7.78	11.82	18.03	15.97	11.58	6.35	5.13	4.98	2.10	1.73	6.25	4.27	11.99	8.13
62	I5_AR3	ActiveIntronRegion	0	1.00	3.95	2.96	2.92	3.68	12.23	5.86	2.37	5.89	10.44	4.62	18.88	25.65	13.22	5.57	3.75	7.35	2.43	0.64	7.00	0.67	12.90	9.63
63	ER6a	ExonRegion	0	22.80	97.07	52.12	73.17	38.03	189.99	45.52	31.04	62.87	72.74	67.90	135.25	122.87	110.62	87.16	78.66	47.05	82.21	94.66	93.38	173.10	252.75	136.08
64	E6_Da	NovelBoundary	0	3.78	5.20	3.40	11.75	6.96	15.67	20.89	16.47	7.87	12.65	14.90	36.61	44.96	31.73	9.27	11.36	13.93	5.02	3.86	15.53	11.68	11.82	19.46
65	E6a_E7a	KnownJunction	0	18.74	111.62	65.55	93.46	63.33	202.67	64.26	22.76	47.89	90.18	46.17	146.00	121.58	80.88	85.42	84.85	64.61	79.92	112.38	92.10	179.46	187.62	86.13
66	I6	Intron	0	6.13	15.41	5.20	9.56	11.12	23.87	13.41	14.67	11.45	22.14	12.30	33.91	51.82	22.92	12.50	12.49	11.44	4.65	5.63	14.86	6.22	26.55	12.81
67	I6_AR1	ActiveIntronRegion	0	3.14	6.92	2.19	6.73	9.63	19.83	12.49	12.89	6.11	12.75	10.27	27.08	43.87	25.70	9.20	9.20	9.99	4.72	5.98	11.37	6.25	17.74	15.43
68	I6_SR1	SilentIntronRegion	0	6.76	12.82	2.10	7.70	10.48	18.46	8.31	8.71	10.48	17.33	10.41	30.61	56.63	16.57	10.13	4.28	12.90	2.33	4.79	8.33	3.87	23.39	9.73
69	I6_AR2	ActiveIntronRegion	0	5.55	10.12	3.69	9.15	6.47	19.74	14.55	9.46	13.88	16.26	15.84	36.01	54.77	24.63	11.31	11.73	12.59	2.79	5.69	12.32	7.92	23.50	15.05
70	I6_AR3	ActiveIntronRegion	0	6.76	9.41	8.45	12.92	17.13	39.05	19.49	25.63	19.04	36.08	18.81	44.19	70.00	34.51	18.38	28.95	19.58	12.89	10.17	25.03	10.61	45.34	24.01
71	I6_AR4	ActiveIntronRegion	0	3.38	8.45	4.52	6.95	12.45	38.93	25.92	13.63	11.95	18.00	14.94	39.46	46.27	24.02	16.24	35.84	10.41	3.87	16.36	30.73	8.22	21.64	4.46
72	I6_AR5	ActiveIntronRegion	0	3.40	6.48	1.65	2.82	10.14	18.81	10.68	10.05	7.61	6.99	10.16	16.61	15.49	19.68	10.39	1.31	6.22	0.00	3.85	17.57	6.10	14.20	4.71
73	I6_AR6	ActiveIntronRegion	1	4.23	0.00	3.68	0.00	0.00	22.01	19.86	12.10	1.24	2.29	23.19	4.33	0.00	12.99	5.80	0.00	19.81	0.00	0.00	10.64	0.00	0.00	0.00
74	I6_SR2	SilentIntronRegion	0	3.50	8.55	4.95	7.63	12.50	17.65	7.98	13.32	7.92	19.23	9.08	21.18	40.69	14.65	9.86	6.75	4.04	2.38	2.48	17.26	3.82	27.18	5.71
75	I6_AR7	ActiveIntronRegion	0	9.70	38.27	7.68	11.59	11.24	21.97	11.55	15.76	7.91	27.39	6.38	36.22	45.48	17.03	12.89	6.02	7.91	2.21	2.46	10.19	2.70	21.16	6.17
76	E7_Aa	NovelBoundary	1	6.00	46.50	20.70	16.91	25.30	0.00	10.47	11.95	7.52	36.96	2.42	113.59	50.16	18.31	33.13	6.84	4.49	0.00	17.32	27.93	6.24	24.68	12.04
77	ER7a	ExonRegion	0	51.34	191.22	67.12	86.07	81.04	197.47	88.66	46.59	81.23	115.95	75.74	100.70	90.30	98.40	98.08	71.98	85.24	62.99	113.82	120.53	143.56	233.87	121.46
78	E7_Da	KnownBoundary	0	54.01	156.49	111.82	113.71	137.69	240.94	90.93	71.59	102.83	148.98	84.60	145.25	75.64	135.26	153.04	89.04	63.86	52.81	96.00	139.02	107.55	280.20	122.41
79	ER7b	ExonRegion	0	48.43	168.52	88.97	92.33	77.22	203.34	90.47	55.96	85.64	127.80	54.21	116.04	85.97	93.79	92.65	51.65	49.92	37.11	76.30	105.42	95.45	219.94	112.17
80	E7_Db	KnownBoundary	1	28.15	139.98	44.26	38.96	69.19	153.89	95.44	22.39	28.15	44.21	13.37	104.43	105.35	50.27	83.32	22.56	13.46	10.07	28.80	52.03	40.28	95.52	49.51
81	ER7c	ExonRegion	0	62.65	126.73	69.50	91.84	122.57	221.05	109.05	58.12	82.99	107.85	43.00	122.71	103.11	81.78	83.97	51.05	43.86	23.10	38.81	63.91	34.73	280.18	85.28
82	ER7d	ExonRegion	1	82.12	150.48	85.53	104.94	103.28	217.12	100.62	62.22	83.99	146.35	45.23	185.30	104.12	52.62	94.58	35.67	53.47	28.46	59.25	72.34	35.26	215.85	46.99
83	ER7e	ExonRegion	0	78.14	125.94	130.11	138.26	92.97	213.81	98.18	77.07	85.07	136.01	59.76	108.65	94.28	67.93	145.52	51.56	46.88	45.61	66.64	94.95	68.36	256.70	83.46
84	IG1_AR1	ActiveIntergenicRegion	0	21.18	1.94	0.00	0.00	16.58	1.75	8.83	1.23	4.39	1.63	0.00	1.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.99	0.00