Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CTTNBP2NL Gene 0 35.46 87.14 43.53 65.29 88.16 118.53 69.41 72.39 74.22 91.72 22.58 13.13 21.70 21.68 17.08 12.66 28.00 68.49 41.41 56.79 83.92 105.89 66.27 2 271277 Transcript 0 22.34 53.49 28.49 41.83 53.27 81.80 43.26 52.23 58.25 71.11 18.80 10.08 17.20 19.80 13.91 10.84 25.59 69.83 33.56 47.03 83.55 83.30 54.60 3 496194 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 441739 Transcript 0 0.09 0.62 0.00 0.07 2.53 8.05 1.01 0.00 2.52 1.10 0.00 0.00 0.00 2.51 0.00 0.02 2.90 0.00 2.47 2.87 0.84 0.03 0.09 5 ER1a ExonRegion 0 0.00 1.61 0.00 0.00 1.73 1.94 0.70 0.31 0.04 0.20 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.87 0.00 0.38 1.04 0.00 0.00 6 E1_Ab KnownBoundary 0 0.00 2.50 0.00 0.00 3.31 6.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 2.47 0.00 0.00 7 ER1b ExonRegion 0 17.92 125.66 6.19 25.26 72.01 141.99 94.64 17.49 27.09 31.94 14.33 0.00 4.69 17.59 14.16 9.58 18.04 68.72 42.18 66.10 45.97 96.60 117.92 8 E1_Da NovelBoundary 0 3.41 3.35 9.88 8.06 3.74 13.12 17.14 11.50 5.27 1.64 0.00 0.00 0.00 0.00 0.00 3.67 0.00 38.55 12.99 9.01 2.53 2.51 7.34 9 E1a_E3a KnownJunction 0 49.49 257.59 15.11 62.36 136.08 201.08 155.36 44.89 63.40 74.78 27.16 0.00 6.49 41.26 13.35 20.08 41.05 145.75 69.93 153.21 67.89 160.55 202.23 10 E2_Aa NovelBoundary 0 7.26 10.00 3.49 5.53 0.00 9.82 13.03 5.05 11.20 8.00 0.00 0.00 0.00 0.00 0.00 10.34 3.46 19.81 33.51 2.43 0.00 3.12 38.75 11 ER2a ExonRegion 0 0.19 1.24 0.00 0.14 1.76 2.76 2.02 0.00 2.29 0.62 0.00 0.00 0.00 2.55 0.00 0.04 1.03 0.00 4.94 2.48 1.68 0.06 0.18 12 E2_Da NovelBoundary 0 0.00 13.09 21.91 11.75 8.40 37.02 13.07 7.27 13.66 15.10 2.68 0.00 0.00 2.35 4.33 3.93 8.79 10.49 17.51 11.38 15.69 0.00 16.48 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 3.31 13.34 0.00 0.00 2.75 1.58 0.00 0.00 0.00 2.47 0.00 0.00 4.77 0.00 0.00 3.26 0.00 0.00 0.00 14 I2 Intron 0 5.04 10.53 16.91 10.44 7.83 4.82 10.37 11.27 9.51 7.28 0.55 0.98 1.95 0.33 1.55 1.40 2.16 4.00 4.44 7.23 2.09 1.31 3.55 15 I2_AR1 ActiveIntronRegion 0 7.41 19.35 26.44 16.67 11.40 6.95 14.05 18.12 15.54 13.13 1.21 1.72 1.21 0.69 1.44 2.25 3.97 5.79 7.33 12.01 3.17 2.02 6.37 16 I2_SR1 SilentIntronRegion 0 14.77 16.97 27.71 12.64 21.57 11.27 17.67 20.44 12.22 5.74 0.00 1.68 0.98 0.68 2.81 0.75 1.68 3.73 4.26 4.02 1.12 2.64 2.98 17 I2_AR2 ActiveIntronRegion 0 11.81 20.10 42.74 18.49 24.29 11.37 16.71 20.50 12.29 13.61 0.23 1.44 4.08 0.47 1.68 2.44 3.49 14.57 8.13 7.89 1.55 3.18 2.42 18 I2_SR2 SilentIntronRegion 0 6.37 12.00 23.59 14.43 6.72 5.69 8.45 16.06 10.92 10.43 0.78 1.23 5.75 0.79 1.48 0.88 0.23 4.75 5.38 9.15 1.14 1.85 4.44 19 I2_AR3 ActiveIntronRegion 0 7.31 25.92 22.68 12.07 9.84 7.75 14.26 12.70 8.20 7.32 0.55 0.04 3.87 0.27 2.21 0.90 1.86 6.25 7.89 7.89 3.34 0.81 4.61 20 I2_AR4 ActiveIntronRegion 0 8.16 23.53 29.23 10.51 5.35 1.83 22.89 10.62 10.41 10.98 0.00 0.00 0.00 1.62 0.00 2.97 3.30 4.49 3.19 6.38 6.61 2.38 7.97 21 I2_AR5 ActiveIntronRegion 0 10.58 12.20 33.21 11.04 9.10 1.83 21.18 13.48 7.29 11.47 0.00 0.00 0.94 1.62 0.00 2.97 3.30 5.17 3.19 7.87 7.49 2.08 8.22 22 I2_SR3 SilentIntronRegion 0 5.18 7.83 20.41 12.33 4.89 6.73 10.82 10.19 10.01 9.41 0.39 0.24 2.07 0.39 2.83 1.42 2.06 5.04 3.86 8.68 2.54 1.22 5.83 23 ER3a ExonRegion 0 14.20 74.41 15.59 43.19 51.36 48.80 43.80 50.61 76.25 78.17 34.23 4.50 14.18 12.80 8.59 11.72 30.19 62.66 47.88 79.98 74.45 116.34 93.48 24 E3a_E4a KnownJunction 0 0.00 37.76 18.33 66.33 27.08 18.57 5.96 65.84 90.42 101.97 28.64 0.00 6.82 35.79 23.24 15.04 41.51 96.96 65.88 126.49 69.87 162.09 108.92 25 E4_Aa NovelBoundary 0 3.33 8.09 15.08 7.82 8.66 0.00 10.33 7.72 4.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.95 3.09 0.00 4.35 26 ER4a ExonRegion 0 9.82 58.68 22.61 41.67 61.57 81.69 48.69 49.43 73.22 72.24 15.50 3.93 22.24 25.53 18.39 21.45 23.65 92.50 66.43 88.70 44.98 175.32 132.03 27 E4_Da NovelBoundary 0 8.15 64.07 18.12 32.80 95.93 137.70 103.83 27.23 38.63 34.71 8.69 5.25 0.00 7.06 10.38 11.02 12.44 24.54 27.77 47.68 32.25 41.76 58.64 28 E4a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E4b_E5a KnownJunction 0 13.93 126.29 18.78 32.83 181.75 200.79 149.93 51.71 56.22 55.77 23.69 32.41 13.64 7.24 24.72 0.00 0.00 35.36 20.24 76.44 53.31 85.85 50.79 30 ER4b ExonRegion 0 9.24 105.19 21.61 34.07 155.19 213.72 145.03 45.41 62.43 53.59 21.79 21.65 9.38 8.42 15.56 10.27 6.30 41.99 30.98 65.38 57.10 76.71 60.87 31 ER5a ExonRegion 0 25.75 105.73 23.30 48.86 60.43 92.39 66.49 61.65 75.96 76.62 26.31 22.90 14.35 20.67 16.59 7.39 28.68 81.26 21.51 84.81 89.32 99.48 62.00 32 E5a_E6a KnownJunction 0 28.08 54.14 21.35 46.98 19.52 50.37 39.57 70.32 73.47 70.86 19.53 12.60 20.45 18.72 4.45 4.36 33.57 152.84 35.20 83.80 94.46 98.40 85.79 33 ER6a ExonRegion 1 17.01 75.56 22.09 48.65 45.44 74.13 52.12 64.42 70.93 70.87 32.95 17.04 20.37 24.39 20.01 7.60 51.47 118.67 38.43 73.19 137.41 110.54 86.39 34 E6a_E7a KnownJunction 0 18.45 86.04 26.76 41.39 67.74 120.50 57.10 59.02 71.06 66.97 24.59 13.20 5.68 36.55 18.54 12.90 51.43 77.89 55.91 48.96 152.65 91.48 72.47 35 ER7a ExonRegion 0 20.27 53.17 40.54 46.33 55.22 112.27 63.35 72.17 84.97 80.06 26.77 19.78 25.16 32.14 14.75 18.82 42.54 106.83 55.13 66.30 165.54 117.57 95.05 36 E7_Da KnownBoundary 0 37.93 85.18 60.41 79.78 100.51 155.37 103.12 92.91 127.89 145.24 36.85 12.45 46.10 49.33 19.66 51.70 77.70 224.35 97.51 116.78 226.97 250.38 151.01 37 ER7b ExonRegion 0 23.07 59.55 34.44 49.06 51.71 117.27 52.17 82.74 108.70 123.91 37.91 18.51 33.68 42.85 26.39 22.09 56.66 171.75 66.81 96.20 202.55 156.29 117.53 38 E7_Ab KnownBoundary 0 38.75 89.13 45.42 65.49 98.98 232.42 131.12 112.46 124.42 152.47 54.65 17.41 33.28 29.96 29.30 19.82 47.31 280.22 56.00 117.74 224.38 158.47 149.13 39 ER7c ExonRegion 0 20.09 59.05 34.48 47.44 63.21 134.87 58.31 94.62 120.92 138.67 39.00 15.80 55.64 38.51 29.92 21.28 52.17 187.24 81.01 86.53 219.85 153.36 145.65 40 E7_Db KnownBoundary 1 24.08 59.20 31.87 45.68 90.32 171.66 82.58 55.57 89.84 85.13 16.48 6.30 15.10 53.51 23.24 4.36 44.88 97.50 54.78 61.23 144.81 80.52 118.57 41 ER7d ExonRegion 0 43.95 99.30 51.04 76.44 106.38 126.17 76.90 73.64 66.03 89.22 18.25 11.72 17.93 16.56 15.34 10.42 20.11 36.85 33.88 44.51 47.06 93.59 46.27 42 IG36 Intergenic 0 2.50 4.45 3.48 6.40 7.00 8.67 5.43 4.02 8.91 6.81 2.92 0.89 1.37 1.79 1.33 1.12 3.23 5.34 5.07 19.18 5.18 3.74 6.06 43 IG36_AR1 ActiveIntergenicRegion 0 3.19 7.45 3.84 11.83 9.24 10.45 9.99 4.21 10.10 7.63 2.91 0.59 1.86 1.69 1.08 1.05 5.26 4.93 5.91 24.14 5.07 5.51 9.30 44 IG36_SR2 SilentIntergenicRegion 0 2.46 3.88 4.30 5.99 6.83 9.78 4.20 4.98 10.82 8.39 3.74 0.78 1.31 2.24 1.51 1.47 3.36 6.01 5.84 21.05 6.34 4.08 6.04