Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SORT1 Gene 0 35.86 73.79 65.30 59.72 65.59 96.95 109.11 82.17 90.98 72.09 0.61 68.31 3.10 20.10 4.77 25.28 16.45 175.69 110.82 145.30 10.90 23.05 17.54 2 256637 Transcript 0 20.58 64.08 46.83 49.69 47.24 88.83 115.37 67.56 96.63 69.53 0.99 114.71 3.45 29.24 6.41 33.92 24.49 247.93 152.33 199.91 19.46 27.12 23.72 3 471996 Transcript 0 0.27 0.00 0.00 0.74 0.34 0.00 0.93 0.65 0.23 0.22 0.00 0.45 0.00 0.00 0.26 0.38 0.00 1.65 1.62 1.87 0.00 0.00 0.00 4 482236 Transcript 0 0.49 0.78 0.42 0.31 0.21 1.41 3.26 0.99 1.28 0.92 0.00 0.82 0.00 0.00 0.00 0.46 0.76 1.84 0.25 3.61 0.00 0.00 0.00 5 493736 Transcript 0 0.00 0.00 0.00 0.83 0.00 0.01 1.08 0.53 0.38 0.70 0.00 0.00 0.00 0.00 0.00 0.61 0.00 1.12 0.00 0.89 0.00 0.00 1.20 6 495777 Transcript 0 0.00 0.47 0.42 0.47 0.63 0.28 2.65 1.98 0.28 1.45 0.00 1.10 0.00 0.00 0.00 0.46 0.00 2.41 0.50 2.63 0.00 0.00 0.00 7 483508 Transcript 0 5.53 2.27 2.69 2.69 3.35 3.44 7.13 2.43 2.01 1.81 1.26 13.00 9.91 5.43 15.43 3.85 6.48 5.22 7.32 10.45 1.98 1.35 3.28 8 466471 Transcript 0 0.58 4.45 0.99 1.65 9.93 4.27 5.10 3.20 3.86 0.00 0.00 0.02 0.00 0.00 0.00 5.10 0.04 7.62 0.87 3.08 0.00 0.02 0.81 9 485149 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1a ExonRegion 0 0.00 0.00 0.23 0.00 1.85 1.01 6.82 1.41 2.23 1.01 0.00 0.00 0.00 0.70 0.00 3.00 4.75 16.77 5.15 8.67 3.10 0.00 1.81 11 E1_Ab KnownBoundary 0 0.00 0.00 1.39 0.00 8.32 18.00 15.85 11.71 8.65 4.92 0.00 0.00 0.00 0.00 0.00 6.75 4.68 150.27 26.26 24.93 3.15 0.00 12.89 12 ER1b ExonRegion 0 0.22 5.80 3.32 4.13 2.38 9.88 5.61 7.91 9.23 8.78 0.13 2.83 0.00 7.14 1.52 10.21 4.23 76.45 17.65 39.91 3.48 3.59 3.60 13 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1a_E5a KnownJunction 0 3.78 20.85 16.32 17.61 8.66 60.65 27.03 34.30 37.76 28.15 2.63 18.91 0.00 20.84 4.45 11.96 12.53 126.60 26.64 144.01 0.00 20.57 4.01 15 ER2a ExonRegion 0 0.81 0.00 0.00 2.22 1.02 0.00 0.67 1.96 0.70 0.65 0.00 1.36 0.00 0.00 0.78 1.13 0.00 4.95 4.85 5.62 0.00 0.00 0.00 16 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E3_Aa NovelBoundary 0 3.26 0.00 1.71 4.49 0.00 0.00 46.68 4.64 1.30 2.55 0.00 6.30 0.00 0.00 0.00 4.36 4.77 5.14 4.61 5.75 0.00 0.00 0.00 18 ER3a ExonRegion 0 0.98 1.57 0.84 0.63 0.41 2.83 6.52 1.98 2.56 1.84 0.00 1.65 0.00 0.00 0.00 0.92 1.53 3.68 0.50 7.22 0.00 0.00 0.00 19 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4a ExonRegion 0 0.00 0.00 0.00 1.66 0.00 0.03 2.16 1.05 0.75 1.40 0.00 0.00 0.00 0.00 0.00 1.21 0.00 2.25 0.00 1.77 0.00 0.00 2.40 21 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER5a ExonRegion 0 4.62 37.79 13.60 17.51 9.50 51.35 48.06 33.85 59.66 33.97 1.29 31.46 0.00 17.13 0.73 15.50 14.25 112.37 57.60 152.06 7.27 14.93 7.24 23 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E5a_E7a KnownJunction 0 10.89 72.22 15.73 20.28 3.65 37.65 76.84 37.71 78.67 46.87 2.05 31.06 0.00 16.78 0.00 32.73 31.04 102.02 73.13 192.14 8.59 11.39 12.21 25 ER6a ExonRegion 0 0.00 0.94 0.84 0.94 1.25 0.57 5.30 3.97 0.57 2.90 0.00 2.20 0.00 0.00 0.00 0.92 0.00 4.81 1.00 5.26 0.00 0.00 0.00 26 ER7a ExonRegion 0 6.55 36.55 26.23 32.86 12.62 25.95 52.03 41.11 73.14 70.72 2.82 44.82 0.00 26.93 3.88 17.75 25.52 116.36 74.30 200.32 7.27 12.84 8.25 27 E7_Da KnownBoundary 0 0.00 6.18 1.18 9.96 4.16 0.00 7.77 2.55 5.76 0.00 0.00 12.60 0.00 0.00 0.00 0.00 0.00 4.15 3.67 8.63 0.00 0.00 3.84 28 E7a_E8a KnownJunction 0 3.56 37.89 36.63 35.89 7.72 22.71 41.47 47.28 99.74 78.81 2.37 98.88 0.00 58.69 0.00 32.13 17.39 126.56 79.44 238.60 8.77 19.10 15.19 29 ER7b ExonRegion 0 5.53 2.27 2.69 2.69 3.35 3.44 7.13 2.43 2.01 1.81 1.26 13.00 9.91 5.43 15.43 3.85 6.48 5.22 7.32 10.45 1.98 1.35 3.28 30 E7_Db NovelBoundary 0 0.00 3.22 6.80 5.73 0.00 0.00 9.45 2.09 3.15 0.00 0.00 0.00 0.00 0.00 0.00 20.51 0.00 8.37 4.80 5.94 3.03 3.12 15.79 31 ER8a ExonRegion 0 10.85 40.20 28.97 31.40 21.82 34.95 44.37 47.73 95.16 68.50 3.28 107.69 2.37 40.07 6.90 33.16 30.38 173.13 121.72 235.47 13.54 33.50 17.28 32 E8a_E9a KnownJunction 0 6.96 45.12 30.99 34.56 29.63 63.54 89.96 55.94 67.39 72.66 2.26 107.28 13.31 27.02 0.00 31.87 14.03 141.65 109.46 191.11 18.59 8.57 16.05 33 ER9a ExonRegion 0 10.54 71.31 31.83 23.37 23.85 68.16 82.71 45.79 80.81 72.35 0.62 64.21 7.38 23.77 2.47 29.72 23.39 134.10 95.29 183.61 12.43 17.38 12.06 34 E9_Da KnownBoundary 0 18.97 83.87 37.88 17.71 37.52 55.42 122.82 43.87 99.22 78.14 0.00 57.92 0.00 28.78 0.00 15.21 20.66 113.33 72.10 179.10 12.36 20.76 22.11 35 ER9b ExonRegion 0 14.85 71.76 41.68 30.20 47.80 73.12 129.39 63.91 101.90 74.05 0.84 105.15 0.60 38.79 7.45 33.05 27.64 166.45 156.14 223.06 14.27 32.31 27.28 36 E9b_E10a KnownJunction 0 10.00 53.74 38.11 20.71 45.50 84.38 86.82 69.09 97.02 81.15 0.00 93.33 6.82 46.32 4.45 35.72 16.74 188.16 117.27 215.08 11.37 21.43 27.91 37 ER10a ExonRegion 0 16.82 55.81 33.00 27.01 55.04 79.34 114.03 65.71 100.79 74.84 0.21 111.10 11.06 37.67 6.94 40.23 31.18 225.23 149.83 217.67 24.87 37.80 23.39 38 E10_Da NovelBoundary 0 23.04 60.45 30.37 38.06 33.19 84.67 97.51 50.36 90.45 47.41 0.00 70.22 6.82 13.83 0.00 28.80 27.40 172.40 132.99 149.12 28.36 28.72 21.77 39 E10b_E11a KnownJunction 0 33.12 54.60 40.54 44.92 58.83 71.21 121.76 84.90 110.62 58.13 2.68 175.56 0.00 26.84 14.71 45.97 21.13 209.51 251.68 246.40 30.52 27.98 31.41 40 ER10b ExonRegion 0 20.69 51.29 33.22 39.52 46.53 76.10 110.40 73.08 110.06 59.51 1.93 139.02 7.56 22.83 7.74 42.60 26.77 228.61 230.76 220.33 30.85 31.83 27.25 41 ER11a ExonRegion 0 13.50 42.05 34.85 32.74 45.38 65.17 104.41 67.10 92.91 55.12 1.04 100.10 3.19 34.56 8.53 39.23 24.62 218.03 203.86 213.06 11.72 29.96 22.38 42 E11a_E12a KnownJunction 0 14.67 57.23 26.91 26.07 35.91 76.94 115.84 52.86 76.56 52.78 0.00 93.03 0.00 19.42 0.00 36.57 21.60 214.65 139.20 171.36 5.44 18.37 24.41 43 ER12a ExonRegion 0 11.15 57.86 27.15 27.43 46.77 66.24 105.72 54.95 93.63 62.85 0.93 108.67 6.34 43.84 3.45 34.37 36.99 230.38 153.70 205.91 29.47 28.20 22.53 44 E12a_E13a KnownJunction 0 2.74 61.90 14.61 33.23 40.41 76.83 56.93 45.84 83.33 63.39 2.26 184.56 27.27 25.43 0.00 48.11 26.83 230.23 239.16 190.35 19.34 29.15 19.38 45 ER13a ExonRegion 0 16.67 38.15 25.04 36.52 47.43 101.18 96.41 55.87 108.23 69.78 2.81 168.07 3.78 42.84 6.92 44.81 36.51 338.27 189.06 246.15 33.82 28.74 20.72 46 E13a_E14a KnownJunction 0 26.45 30.98 34.62 45.02 55.35 77.40 124.32 61.94 109.98 89.10 2.63 204.07 0.00 49.09 0.00 16.75 30.01 315.63 155.02 257.07 32.43 27.92 22.02 47 ER14a ExonRegion 0 17.50 28.87 38.94 51.68 33.91 82.10 87.60 51.81 109.00 71.87 1.03 144.48 3.79 29.18 5.32 38.87 30.39 307.18 163.37 258.52 27.11 27.45 33.83 48 E14a_E15a KnownJunction 0 32.15 32.76 33.32 54.37 6.71 117.49 110.80 45.35 112.70 69.14 0.00 175.26 0.00 17.19 8.90 35.38 27.12 340.46 168.29 255.99 26.07 36.19 36.11 49 ER15a ExonRegion 0 24.03 34.75 41.58 44.49 32.11 91.89 126.25 40.87 105.15 64.28 0.64 107.56 0.00 32.09 2.45 33.75 21.20 328.98 129.04 201.28 25.22 24.77 21.27 50 E15_Ab KnownBoundary 0 19.93 47.82 58.54 40.55 54.84 96.19 148.34 41.12 115.10 64.23 2.37 94.23 0.00 29.49 0.00 28.80 17.02 302.15 104.10 193.03 26.81 13.66 14.94 51 ER15b ExonRegion 1 12.39 41.95 46.70 48.43 34.18 91.57 114.76 40.01 108.35 60.14 1.12 117.38 1.51 40.92 5.24 55.90 16.72 364.22 191.69 238.06 24.88 30.65 35.00 52 E15a_E16a KnownJunction 0 16.97 37.69 39.27 68.06 29.20 71.78 103.34 37.25 111.11 83.54 0.00 155.15 13.15 31.08 13.35 65.28 35.72 393.52 237.75 287.31 24.83 41.52 43.62 53 ER16a ExonRegion 0 17.80 36.72 42.82 54.89 32.08 76.56 106.71 53.85 92.56 70.27 0.83 107.73 10.56 27.00 9.01 51.77 25.57 372.83 155.87 227.29 26.83 34.39 40.12 54 E16a_E17a KnownJunction 0 12.59 35.19 48.25 47.81 43.46 92.84 86.87 70.85 73.99 62.86 2.00 127.09 0.00 36.32 10.75 52.38 26.74 347.21 161.79 209.97 21.25 23.88 35.17 55 ER17a ExonRegion 0 15.42 46.32 45.63 43.52 41.66 76.82 107.47 65.91 103.82 79.59 0.66 103.34 1.25 34.83 8.19 43.60 32.93 382.65 194.68 218.98 31.40 35.63 25.28 56 E17_Da KnownBoundary 0 0.00 9.60 0.00 0.00 4.24 5.11 6.40 4.15 4.89 0.00 0.00 0.00 0.00 0.00 0.00 8.54 0.00 6.72 0.00 8.44 0.00 0.00 0.00 57 E17a_E18a KnownJunction 0 32.75 78.21 76.58 58.13 41.85 101.42 120.48 86.38 122.34 73.74 0.00 104.88 0.00 38.32 13.35 63.91 39.46 371.71 226.45 231.06 25.95 27.43 27.74 58 ER17b ExonRegion 0 0.58 4.45 0.99 1.65 9.93 4.27 5.10 3.20 3.86 0.00 0.00 0.02 0.00 0.00 0.00 5.10 0.04 7.62 0.87 3.08 0.00 0.02 0.81 59 ER18a ExonRegion 0 18.64 62.13 51.81 48.65 43.25 78.19 120.56 79.25 103.76 71.95 1.03 101.05 4.86 36.97 8.16 45.22 34.10 323.39 172.34 197.08 19.27 34.84 22.16 60 E18a_E19a KnownJunction 1 39.93 84.39 85.24 65.59 57.39 130.27 180.27 90.08 134.84 75.16 0.00 180.81 6.82 38.73 18.67 74.68 17.86 359.61 187.21 247.81 17.24 55.60 22.02 61 ER19a ExonRegion 0 24.07 102.41 71.34 61.95 53.71 97.39 134.21 65.74 100.34 74.13 0.52 121.43 4.81 33.56 10.48 36.56 27.87 254.46 146.96 210.67 24.46 30.21 24.47 62 E19a_E20a KnownJunction 0 23.26 83.67 77.97 77.91 43.72 84.10 114.38 72.66 110.10 90.93 0.00 155.30 0.00 40.56 5.07 15.81 27.02 203.91 157.28 189.71 31.51 23.39 19.89 63 ER20a ExonRegion 0 18.29 71.51 65.01 66.50 43.45 77.80 114.15 74.29 104.29 83.66 1.54 76.93 3.73 26.28 9.20 24.01 17.07 168.22 146.83 185.14 16.91 22.74 24.60 64 E20a_E21a KnownJunction 0 11.11 121.16 47.93 73.18 44.40 101.19 179.17 75.54 97.74 86.68 2.11 81.48 0.00 22.31 4.45 18.71 16.46 220.37 110.12 150.08 14.70 20.94 35.00 65 E21_Ab NovelBoundary 0 44.30 125.70 50.47 88.10 86.50 131.40 186.59 77.96 92.79 82.09 0.00 50.42 0.00 17.13 4.94 30.68 13.28 270.86 129.89 119.91 16.43 20.08 39.35 66 ER21a ExonRegion 0 25.86 102.06 44.96 72.40 60.29 110.26 165.41 71.84 91.01 80.61 0.54 65.35 0.00 20.30 4.81 20.90 13.00 245.87 114.67 132.78 17.49 21.36 39.00 67 ER21b ExonRegion 0 30.10 125.24 65.45 66.73 112.31 139.73 160.04 89.50 114.54 91.57 0.45 64.66 4.69 27.23 4.37 33.54 21.73 254.29 167.62 201.35 15.34 22.65 36.19 68 E21a_E22a KnownJunction 0 46.67 173.39 69.42 89.73 162.82 127.48 181.91 115.79 158.10 120.15 2.58 133.84 6.17 28.72 5.69 53.06 18.61 243.37 282.46 273.31 17.05 56.58 49.77 69 ER22a ExonRegion 0 29.35 85.52 69.42 72.70 92.15 87.97 114.48 103.79 119.40 91.85 1.52 97.47 2.63 28.66 7.10 27.61 29.09 290.82 164.00 207.42 14.99 34.97 29.72 70 E22a_E23a KnownJunction 0 10.45 97.48 64.78 61.33 62.56 70.41 133.64 100.02 100.00 97.08 0.00 99.48 6.82 23.84 4.45 26.23 27.68 265.92 99.01 216.74 5.56 18.13 39.01 71 E22a_E24a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 ER23a ExonRegion 0 16.28 88.72 54.43 52.95 65.34 81.57 120.70 89.15 93.79 83.16 0.00 86.28 4.35 29.67 5.36 24.45 30.21 216.83 130.57 204.39 15.14 27.04 23.37 73 E23a_E24a KnownJunction 0 14.45 82.22 54.76 53.77 98.22 172.29 145.52 83.71 75.38 70.35 0.00 93.63 0.00 34.32 10.01 35.97 24.31 256.64 121.32 238.28 12.85 34.41 7.68 74 ER24a ExonRegion 0 22.81 57.93 43.67 42.93 58.85 107.46 102.82 85.98 91.41 78.65 0.00 56.87 1.81 32.53 5.33 30.99 20.18 261.01 117.07 175.30 13.09 23.78 28.11 75 E24_Da KnownBoundary 0 11.34 64.92 27.82 33.23 122.41 349.91 262.64 104.82 101.10 58.56 0.00 139.10 6.82 37.67 4.45 22.39 12.34 192.59 112.29 166.63 20.20 20.27 20.57 76 ER24b ExonRegion 0 63.02 116.67 108.54 96.22 107.07 151.75 161.50 130.19 129.99 105.68 0.47 81.91 2.86 21.27 3.70 30.22 16.85 205.96 140.48 174.90 10.22 30.85 20.95