Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PRPF38B Gene 0 497.48 128.83 129.98 192.16 245.22 135.60 175.02 112.19 88.94 112.37 197.85 330.04 257.70 269.54 204.70 181.32 196.79 62.42 51.86 94.95 57.71 130.21 74.28 2 370025 Transcript 0 0.00 0.00 0.00 1.36 2.68 0.00 0.66 0.00 1.24 1.15 14.50 0.00 0.00 2.44 11.61 26.75 16.50 6.47 17.52 4.26 12.12 27.09 14.68 3 370022 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.00 3.74 0.00 0.00 2.56 0.00 0.00 0.00 4 467302 Transcript 1 87.87 27.76 18.92 42.18 114.38 75.48 95.66 66.34 66.31 55.83 63.61 257.95 210.50 151.12 62.82 84.04 57.29 7.08 14.23 40.78 5.93 100.15 26.68 5 370021 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 485810 Transcript 0 242.11 47.45 31.06 68.96 144.60 75.53 94.45 57.30 50.47 52.89 94.58 200.38 155.84 157.98 72.61 98.18 91.45 11.04 14.45 43.14 20.51 68.70 35.91 7 IG4_AR1 ActiveIntergenicRegion 0 12.79 7.30 14.89 23.00 12.43 6.28 8.28 7.94 5.21 7.51 6.53 31.46 3.60 9.67 8.29 4.52 2.65 2.68 4.85 3.32 0.47 1.14 0.12 8 ER1a ExonRegion 0 0.00 0.00 0.00 1.36 2.68 0.00 0.66 0.00 1.24 1.15 14.50 0.00 0.00 2.44 11.61 26.75 16.50 6.47 17.52 4.26 12.12 27.09 14.68 9 ER1b ExonRegion 0 0.71 0.00 0.00 2.27 2.68 0.00 1.32 0.00 1.24 1.15 17.40 0.00 0.00 5.41 16.44 32.69 16.50 7.39 19.11 4.26 13.22 33.34 17.62 10 ER1c ExonRegion 1 21.92 13.51 9.54 14.12 9.75 27.64 23.36 6.54 12.44 12.78 102.17 0.00 0.00 224.59 204.54 221.64 110.58 39.33 94.65 27.66 88.46 179.48 114.11 11 ER1d ExonRegion 1 34.03 30.21 44.59 37.82 25.13 52.19 37.44 35.78 35.74 59.56 159.59 32.04 37.67 235.77 135.71 176.30 178.24 101.80 65.86 73.45 111.11 99.26 86.14 12 E1a_E2a KnownJunction 0 13.19 0.00 2.63 7.19 0.00 23.62 0.00 2.22 20.20 7.82 40.69 24.01 12.99 38.44 15.20 14.44 38.06 14.38 3.67 11.19 28.54 8.14 31.84 13 E1a_E3a KnownJunction 0 136.25 92.09 151.92 118.80 116.55 95.63 79.14 88.60 73.93 159.18 278.75 123.79 183.43 436.93 215.59 230.37 277.51 190.23 64.10 120.16 174.64 132.02 79.22 14 I1_SR2 SilentIntronRegion 0 6.72 1.90 1.36 0.97 5.29 10.74 5.41 4.12 5.61 3.50 24.55 6.95 18.76 50.95 11.83 38.47 28.87 8.10 1.79 12.09 8.91 5.88 3.61 15 E2_Aa NovelBoundary 0 15.85 12.30 0.00 3.60 16.72 11.02 8.39 3.57 13.74 5.86 23.06 0.00 6.82 48.03 8.90 52.55 46.38 16.00 19.11 29.34 17.17 8.33 10.84 16 ER2a ExonRegion 0 34.98 13.85 5.64 7.95 16.66 21.83 5.02 9.95 16.94 13.37 40.26 27.86 14.96 74.22 31.64 38.97 42.60 22.80 17.19 25.45 29.15 22.53 24.10 17 E2a_E3a KnownJunction 0 42.38 10.66 7.21 3.53 10.70 18.46 6.05 18.85 14.41 20.60 36.90 13.80 20.29 67.40 27.94 58.62 65.17 28.11 11.48 25.50 13.65 19.10 20.06 18 ER3a ExonRegion 0 128.25 122.19 126.02 122.52 125.80 134.11 117.39 87.27 91.77 171.95 384.25 157.37 204.66 493.78 234.29 311.81 363.43 224.57 96.85 184.03 191.34 141.47 126.19 19 E3a_E4a KnownJunction 0 111.06 130.70 95.18 160.85 78.35 155.08 152.85 88.06 115.05 174.41 312.08 147.95 183.43 390.49 208.54 318.98 276.30 207.72 88.85 152.19 160.25 153.08 130.61 20 ER4a ExonRegion 0 168.56 184.19 125.11 158.19 197.78 167.26 181.90 131.72 128.66 182.16 390.71 364.67 244.71 509.18 201.41 330.24 339.12 166.56 98.24 153.20 121.04 220.81 121.31 21 E4a_E5a KnownJunction 0 397.26 234.43 91.39 191.02 344.14 186.37 248.86 121.95 121.06 179.22 317.24 470.70 295.92 481.02 249.95 305.30 248.90 139.66 105.98 154.94 48.37 232.01 134.11 22 ER5a ExonRegion 0 391.97 286.37 130.05 227.22 244.77 142.77 212.42 131.62 119.89 174.27 337.08 565.67 413.18 516.47 196.86 304.76 299.14 120.29 105.27 180.50 90.60 228.81 136.05 23 E5_Da KnownBoundary 1 128.76 37.30 30.07 28.87 104.41 86.71 58.82 71.10 66.03 39.14 89.97 227.17 161.03 159.40 39.19 84.08 86.49 19.61 4.14 33.11 15.32 90.20 30.05 24 E5a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.00 3.74 0.00 0.00 2.56 0.00 0.00 0.00 25 E5a_E6b KnownJunction 0 479.34 339.48 157.09 243.29 112.39 76.32 142.56 69.99 76.19 144.92 209.84 311.80 274.82 265.58 113.85 148.42 228.61 101.81 92.33 126.43 93.41 108.14 85.79 26 ER5b ExonRegion 1 87.87 27.76 18.92 42.18 114.38 75.48 95.66 66.34 66.31 55.83 63.61 257.95 210.50 151.12 62.82 84.04 57.29 7.08 14.23 40.78 5.93 100.15 26.68 27 E5_Ab KnownBoundary 0 109.65 75.58 35.75 85.14 161.04 88.24 126.88 99.07 90.68 70.35 159.04 263.94 282.61 160.58 94.20 117.15 158.67 12.73 24.75 75.17 11.43 152.10 37.56 28 ER5c ExonRegion 0 107.11 41.66 21.87 46.81 107.20 67.67 82.96 63.86 54.64 49.90 119.44 201.61 168.66 180.39 66.96 120.45 109.89 24.76 20.06 41.11 28.77 76.67 39.13 29 E5_Db NovelBoundary 1 145.14 61.30 21.32 41.72 149.58 54.80 132.00 24.19 21.41 25.01 46.06 241.43 87.49 86.35 81.59 54.94 12.16 6.18 4.52 35.73 2.35 87.63 13.06 30 I5 Intron 0 103.22 41.49 10.48 29.12 74.19 43.85 54.86 27.91 31.10 21.25 61.00 150.53 108.08 80.18 47.54 29.37 36.83 2.93 6.09 22.38 3.51 52.47 10.30 31 I5_AR2 ActiveIntronRegion 0 117.94 47.41 11.97 33.28 84.78 50.10 62.67 31.90 35.54 24.28 69.69 172.00 123.52 91.62 54.34 33.54 42.06 3.35 6.94 25.58 4.01 59.92 11.75 32 E6_Aa NovelBoundary 0 172.40 102.94 24.39 65.03 179.54 60.82 87.93 82.72 85.21 56.46 104.50 270.09 269.95 155.40 100.25 93.99 58.63 0.00 4.05 59.38 9.20 94.36 11.69 33 ER6a ExonRegion 0 242.11 47.45 31.06 68.96 144.60 75.53 94.45 57.30 50.47 52.89 94.58 200.38 155.84 157.98 72.61 98.18 91.45 11.04 14.45 43.14 20.51 68.70 35.91 34 E6_Ab KnownBoundary 0 848.89 87.35 38.85 82.91 157.22 68.54 99.63 66.01 37.27 55.12 59.01 211.12 169.14 139.21 118.43 72.03 64.14 6.55 9.22 43.08 13.96 33.37 74.52 35 ER6b ExonRegion 0 1372.21 348.06 246.90 447.94 527.13 260.17 347.80 203.52 169.80 232.66 435.77 642.62 604.70 609.47 340.49 404.76 434.76 155.58 118.30 191.66 150.43 241.82 186.13 36 E6a_E7a KnownJunction 0 1412.55 400.45 284.08 400.38 417.40 196.88 287.50 231.82 159.84 215.86 388.84 758.05 470.10 625.58 427.22 417.92 406.08 230.73 139.67 203.70 137.52 222.28 149.04 37 I6 Intron 0 110.53 5.59 6.69 12.71 23.70 1.40 12.53 7.87 2.53 3.91 5.61 4.28 2.61 2.82 4.64 1.36 2.52 2.25 1.95 0.97 0.34 1.91 1.35 38 I6_AR1 ActiveIntronRegion 0 111.19 5.62 6.73 12.79 23.83 1.41 12.61 7.91 2.54 3.94 5.64 4.30 2.63 2.83 4.67 1.37 2.54 2.27 1.96 0.98 0.34 1.92 1.35 39 ER7a ExonRegion 0 1777.37 345.48 310.31 404.73 546.26 263.59 363.60 221.20 168.07 207.07 399.79 583.45 647.87 707.75 432.70 434.08 458.53 206.44 139.29 200.67 195.18 173.73 196.19 40 E7_Da KnownBoundary 0 2001.32 265.54 452.41 556.44 710.36 337.08 431.25 248.09 215.94 215.35 396.52 657.96 724.63 644.42 569.01 558.74 379.90 317.95 167.25 213.93 181.32 162.94 225.44 41 ER7b ExonRegion 0 734.04 181.03 214.88 308.17 355.56 185.64 249.24 155.83 113.59 150.73 234.75 449.69 317.29 272.00 306.42 191.95 232.73 60.75 59.94 120.08 48.43 161.33 78.49 42 IG5_AR1 ActiveIntergenicRegion 0 32.91 11.22 18.63 9.85 22.82 10.12 17.03 14.64 8.62 4.57 7.43 24.23 12.04 10.94 21.14 6.96 8.84 5.53 2.13 8.18 3.31 19.50 6.87