Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GNAT2 Gene 0 1.13 3.95 1.53 2.86 2.14 2.24 6.00 1.47 3.51 4.17 2.06 4.67 1.72 1.88 2.18 3.74 3.52 8.61 11.04 5.83 5.79 4.36 4.58 2 351050 Transcript 0 0.51 2.01 0.64 1.12 0.88 1.69 2.74 0.83 1.94 1.62 1.34 3.61 1.56 0.99 2.01 3.20 2.41 4.54 5.45 3.03 4.74 2.42 3.05 3 IG34_AR4 ActiveIntergenicRegion 0 5.61 5.88 14.52 9.30 6.93 2.35 13.39 6.47 3.62 10.59 0.88 4.41 1.41 1.10 3.61 0.54 0.60 16.05 11.06 5.39 6.56 5.92 4.88 4 IG34_SR3 SilentIntergenicRegion 0 6.15 7.80 15.35 9.19 4.44 4.52 11.56 5.28 5.63 9.11 0.59 3.90 1.53 2.09 2.87 0.63 1.74 17.10 8.56 8.74 10.39 5.20 6.18 5 IG34_AR3 ActiveIntergenicRegion 0 4.23 6.31 16.99 7.33 4.28 2.93 5.99 2.40 6.81 7.31 1.03 0.58 1.54 2.14 1.45 0.48 1.32 11.13 12.30 4.26 5.33 3.68 1.95 6 IG34_AR2 ActiveIntergenicRegion 0 1.61 6.57 5.74 6.19 3.57 1.94 6.57 4.93 4.97 6.34 0.92 1.09 1.11 1.40 1.93 0.28 1.19 15.19 9.12 3.37 4.18 7.66 6.62 7 IG34_SR1 SilentIntergenicRegion 0 0.94 5.80 5.28 5.75 5.98 2.43 7.59 2.02 3.51 6.06 0.77 1.30 1.84 1.60 1.04 0.76 1.02 14.09 12.52 7.78 6.13 4.72 8.63 8 IG34_AR1 ActiveIntergenicRegion 0 0.00 5.06 6.65 3.51 3.49 2.00 8.52 3.11 5.29 5.16 2.51 0.00 2.11 0.81 0.65 1.62 1.18 11.35 14.75 7.99 5.55 4.31 5.59 9 ER1a ExonRegion 0 0.35 2.04 2.44 3.06 3.58 2.15 5.74 2.10 3.05 9.15 1.62 0.31 0.69 1.52 1.03 3.49 1.10 13.69 15.61 4.27 6.54 3.70 3.44 10 E1_Da NovelBoundary 0 0.00 5.33 2.72 3.30 0.00 2.90 6.49 4.19 5.44 4.46 0.00 0.00 0.00 2.12 4.45 0.00 0.00 27.44 4.05 5.50 5.50 0.00 0.00 11 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.40 0.00 0.00 0.00 0.00 0.00 0.00 4.42 0.00 5.62 2.82 0.00 12 I1 Intron 0 0.99 3.81 6.11 4.69 1.70 2.21 6.16 2.67 4.43 6.06 1.03 2.08 2.70 1.48 0.95 0.80 1.66 19.37 9.70 7.83 6.71 3.63 7.47 13 I1_SR1 SilentIntronRegion 0 1.77 4.25 3.60 3.83 1.22 1.19 3.19 4.24 5.34 8.65 2.05 0.00 1.17 0.12 2.65 0.00 2.28 26.98 20.42 6.45 8.13 6.74 9.89 14 I1_AR2 ActiveIntronRegion 0 1.14 6.49 5.69 7.36 1.06 6.64 8.80 3.98 6.07 8.98 1.40 1.81 2.20 0.81 0.75 0.00 0.94 25.31 7.81 6.17 6.73 4.41 10.83 15 I1_AR3 ActiveIntronRegion 0 0.70 3.88 5.67 5.22 0.89 7.47 8.35 1.78 3.18 4.64 0.14 1.41 2.83 1.96 0.00 2.62 1.29 21.01 4.76 7.90 8.84 2.19 11.92 16 I1_AR4 ActiveIntronRegion 0 2.20 5.37 5.66 1.05 0.00 2.35 8.09 2.19 5.06 2.79 4.96 2.21 6.37 4.99 0.00 3.65 3.74 17.61 2.40 9.03 6.24 3.70 9.92 17 I1_SR2 SilentIntronRegion 0 0.95 3.17 6.63 4.57 2.16 0.76 5.74 2.54 4.37 5.91 0.89 2.48 2.70 1.43 1.12 0.60 1.60 18.16 10.47 8.36 6.41 3.56 6.13 18 E2_Aa NovelBoundary 0 0.00 6.12 6.74 3.30 7.56 2.16 7.95 5.09 6.11 3.33 0.00 0.00 0.00 2.47 0.00 0.00 0.00 14.76 26.17 0.00 11.00 0.00 8.28 19 ER2a ExonRegion 0 0.00 0.00 0.03 0.00 0.00 0.00 0.18 0.36 0.20 0.00 1.30 1.41 3.60 0.00 0.00 0.00 0.00 0.21 2.59 0.10 3.43 0.97 0.14 20 E2_Da NovelBoundary 0 3.41 3.03 14.93 5.06 4.33 2.56 8.92 0.00 1.68 9.86 0.00 0.00 6.82 0.00 4.45 4.02 0.00 8.46 17.60 14.57 14.76 0.00 3.84 21 E2a_E3a KnownJunction 0 0.00 2.37 0.00 0.00 0.00 0.00 0.00 1.68 1.07 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 3.16 22 I2 Intron 0 0.76 2.57 3.95 2.56 1.45 2.31 3.82 3.25 3.98 4.31 0.70 0.64 0.70 2.89 2.00 1.61 3.57 11.43 15.50 5.75 5.16 2.63 6.35 23 I2_SR1 SilentIntronRegion 0 0.77 2.58 3.98 2.58 1.46 2.33 3.84 3.27 4.00 4.34 0.70 0.65 0.70 2.91 2.01 1.62 3.59 11.51 15.61 5.79 5.20 2.65 6.40 24 E3_Aa NovelBoundary 0 0.00 3.35 6.74 5.69 4.24 2.33 16.69 0.00 3.39 6.58 0.00 0.00 0.00 0.00 6.30 0.00 0.00 11.57 28.05 9.65 16.06 2.57 19.97 25 ER3a ExonRegion 0 1.52 1.46 0.65 2.19 0.96 0.66 5.18 1.85 5.29 0.61 3.01 1.28 1.39 4.29 5.41 2.13 3.56 7.17 4.58 7.67 6.02 3.76 8.35 26 E3_Da NovelBoundary 0 0.00 3.35 2.60 6.69 3.99 11.24 10.55 2.55 1.77 7.74 0.00 5.40 0.00 4.77 0.00 0.00 0.00 14.34 4.80 14.38 6.24 5.69 7.34 27 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.90 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.00 28 E4_Aa NovelBoundary 0 0.00 5.79 5.47 3.60 3.31 0.00 6.23 2.42 3.24 5.40 0.00 12.15 0.00 0.00 0.00 0.00 0.00 12.39 9.60 2.88 8.03 0.00 0.00 29 ER4a ExonRegion 0 0.68 2.63 2.36 0.66 2.59 2.37 8.20 0.83 2.95 4.97 1.93 1.15 1.25 1.73 2.90 0.96 4.18 11.25 24.66 5.45 5.69 6.71 4.78 30 E4_Da NovelBoundary 0 0.00 2.96 10.70 5.03 11.71 2.27 8.35 1.97 8.59 15.88 5.21 0.00 0.00 0.00 0.00 0.00 4.77 26.86 14.12 11.51 5.00 0.00 4.27 31 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 5.87 0.00 0.00 32 I4 Intron 0 1.07 4.83 4.24 4.82 1.08 2.23 8.91 3.39 2.88 6.56 0.98 1.88 1.21 1.37 1.42 2.55 1.33 18.52 16.89 8.49 8.68 4.10 6.08 33 I4_SR1 SilentIntronRegion 0 1.07 4.84 4.25 4.83 1.08 2.23 8.92 3.39 2.89 6.57 0.98 1.89 1.21 1.37 1.42 2.56 1.34 18.55 16.92 8.51 8.69 4.11 6.09 34 E5_Aa NovelBoundary 0 3.78 2.96 0.00 4.10 0.00 8.52 11.17 0.00 8.56 5.48 0.00 0.00 13.15 0.00 4.45 0.00 0.00 14.22 0.00 15.08 0.00 2.88 0.00 35 ER5a ExonRegion 0 0.00 3.22 0.72 1.61 0.04 2.90 3.60 1.02 1.47 2.07 2.29 4.30 3.05 3.02 2.23 3.41 2.87 12.59 2.54 5.86 5.50 2.20 3.26 36 E5_Da NovelBoundary 0 2.74 12.96 0.00 4.06 11.04 0.00 5.87 4.11 2.98 4.14 0.00 0.00 0.00 2.47 4.82 0.00 0.00 23.17 24.38 5.69 3.15 2.63 0.00 37 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 5.19 3.12 0.00 38 I5 Intron 0 1.56 3.99 2.24 1.00 3.28 0.90 8.44 2.53 2.26 2.51 0.95 0.00 1.76 1.31 1.80 2.19 3.24 16.00 11.72 5.22 2.70 2.04 6.48 39 I5_SR1 SilentIntronRegion 0 1.57 4.03 2.26 1.01 3.31 0.91 8.52 2.55 2.28 2.54 0.96 0.00 1.78 1.32 1.82 2.21 3.27 16.15 11.83 5.27 2.73 2.06 6.54 40 E6_Aa NovelBoundary 0 6.96 3.29 4.82 5.56 4.33 0.00 6.58 1.89 1.50 4.57 4.95 6.15 0.00 4.77 0.00 0.00 3.65 29.76 7.81 5.56 0.00 6.25 7.77 41 ER6a ExonRegion 0 0.00 1.60 0.72 0.80 3.11 2.88 5.19 2.02 5.73 1.96 3.03 10.99 3.03 1.16 0.80 1.46 6.32 13.47 5.81 5.01 9.36 2.77 4.79 42 E6_Da NovelBoundary 0 0.00 9.74 6.71 7.56 4.33 0.00 10.95 11.13 6.80 6.29 5.32 6.30 0.00 0.00 6.30 8.29 4.58 41.25 12.89 19.94 6.18 5.76 19.72 43 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.42 0.00 0.00 4.61 0.00 5.93 0.00 0.00 44 E7_Aa NovelBoundary 0 3.63 6.31 2.90 9.26 4.24 0.00 6.14 2.34 4.20 4.06 2.68 7.05 0.00 2.47 0.00 4.36 0.00 8.25 14.31 23.59 2.90 6.25 4.35 45 ER7a ExonRegion 0 2.76 3.94 0.60 1.35 0.05 1.75 3.95 1.71 0.49 1.13 3.13 9.39 1.89 1.85 2.03 4.98 4.93 2.80 3.54 7.76 4.52 3.22 4.37 46 E7_Da NovelBoundary 0 0.00 0.00 3.19 4.99 4.07 2.44 24.16 0.00 4.02 4.35 1.95 7.65 0.00 0.00 4.45 3.59 3.93 4.52 4.42 17.51 2.78 7.47 8.28 47 E7a_E8a KnownJunction 0 0.00 2.76 0.00 0.00 0.00 9.54 0.00 0.00 3.39 0.00 0.00 11.70 6.82 0.00 0.00 20.68 8.70 2.11 0.00 0.00 0.00 0.00 8.37 48 I7_SR1 SilentIntronRegion 0 1.07 8.47 5.07 6.41 0.68 3.24 11.03 3.58 1.39 4.32 0.73 13.08 7.24 0.68 1.81 3.00 1.67 3.37 8.04 7.52 1.67 2.63 7.79 49 E8_Aa NovelBoundary 0 3.33 14.73 8.87 11.19 8.40 2.44 13.07 0.00 3.15 5.59 0.00 0.00 6.17 0.00 0.00 11.28 4.77 0.00 13.18 5.82 3.15 8.63 7.43 50 ER8a ExonRegion 0 2.35 10.13 2.01 7.08 2.92 3.07 8.99 0.95 5.49 4.39 1.11 8.27 1.69 1.24 2.41 7.51 4.54 2.69 13.44 7.02 4.45 6.99 5.12