Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RWDD3	Gene	0	74.34	81.16	51.36	53.46	67.20	44.78	33.76	42.68	33.48	50.01	38.30	62.41	35.04	42.75	49.01	28.07	29.47	24.66	17.87	19.16	18.99	40.78	22.97
2	370202	Transcript	0	1.06	4.30	1.12	0.85	0.00	2.48	0.00	0.24	1.50	2.13	0.17	2.37	2.35	0.21	0.28	0.00	1.25	0.00	0.00	0.21	0.99	1.68	0.00
3	429514	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	263893	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	492639	Transcript	0	4.55	0.92	3.25	1.73	4.84	0.55	2.95	1.50	1.39	1.00	0.58	5.40	2.30	3.31	2.29	2.23	3.82	3.55	1.44	1.27	1.99	1.52	3.96
6	495272	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	497058	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	473397	Transcript	0	7.56	5.85	1.63	0.00	0.00	2.56	0.00	1.64	3.10	1.61	0.00	0.00	0.00	2.47	0.00	0.00	0.00	1.78	0.00	0.00	0.00	0.00	0.00
9	419345	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	460571	Transcript	0	74.05	31.65	45.25	52.96	66.62	45.06	35.86	37.39	28.64	38.57	25.96	44.38	22.94	24.39	29.94	20.59	14.75	11.58	16.44	14.17	8.35	23.13	13.42
11	ER1a	ExonRegion	0	0.00	2.50	1.01	1.70	0.00	3.12	0.00	0.49	1.76	1.39	0.34	2.58	0.00	0.43	0.56	0.00	2.49	0.00	0.00	0.41	1.97	1.28	0.00
12	E1_Ab	KnownBoundary	0	3.48	2.76	1.77	0.00	0.00	0.00	1.85	0.00	3.44	1.37	0.00	6.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.19	2.88	0.00
13	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	2.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E1_Ae	KnownBoundary	0	18.30	11.38	1.69	7.16	3.23	28.79	7.33	4.72	8.01	4.41	13.32	0.00	0.00	7.59	4.70	47.00	14.96	1.58	3.58	2.68	2.41	15.12	10.41
16	ER1b	ExonRegion	0	2.82	5.42	3.68	5.45	0.00	4.89	1.32	4.03	7.82	4.97	3.22	4.33	0.00	4.33	2.90	1.98	6.60	0.00	0.00	2.84	0.00	2.08	1.96
17	ER1c	ExonRegion	0	22.68	11.33	6.83	6.23	3.82	19.91	6.24	10.12	9.88	10.98	15.19	3.09	0.00	9.74	7.05	28.45	13.20	6.07	10.92	4.86	7.24	12.50	7.97
18	ER1d	ExonRegion	1	59.26	16.27	14.09	9.54	12.04	39.89	15.89	14.26	15.44	16.63	37.21	0.00	0.00	31.67	19.58	51.27	23.11	26.33	28.67	7.45	28.10	30.21	16.89
19	ER1e	ExonRegion	1	142.30	41.14	27.70	18.70	77.72	103.33	62.47	26.77	30.02	37.39	68.87	0.00	0.00	56.62	62.95	95.66	57.88	60.85	61.26	34.39	71.49	64.59	45.48
20	E1_Af	KnownBoundary	0	199.00	64.20	44.44	28.63	159.76	147.87	105.68	46.58	44.30	60.60	60.75	17.86	0.00	55.09	82.70	70.49	81.35	98.95	64.85	61.55	79.63	63.32	53.01
21	ER1f	ExonRegion	0	71.02	27.69	26.88	17.43	57.73	59.62	37.69	26.77	27.93	41.09	24.59	6.45	0.40	26.47	25.12	28.65	47.13	57.87	19.79	26.21	36.57	23.81	25.56
22	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.29	0.00	6.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	3.31	0.00	0.00	3.57	0.00	6.90	0.00	5.85	0.00	0.00	0.00	0.00	4.68	2.16	0.00	3.20	0.00	0.00	0.00
24	E1a_E4a	KnownJunction	0	0.00	0.00	11.47	8.29	0.00	9.60	6.76	8.83	11.40	7.84	4.95	5.55	0.00	2.47	8.90	3.76	13.09	11.77	0.00	5.82	6.18	5.27	7.68
25	E1a_E6a	KnownJunction	0	7.56	5.85	1.63	0.00	0.00	2.56	0.00	1.64	3.10	1.61	0.00	0.00	0.00	2.47	0.00	0.00	0.00	1.78	0.00	0.00	0.00	0.00	0.00
26	E2_Aa	NovelBoundary	0	11.26	6.71	3.08	7.72	14.77	5.11	4.11	3.70	6.92	5.37	4.05	12.45	12.50	22.31	4.45	10.94	3.74	14.22	3.58	6.46	10.93	3.12	12.98
27	ER2a	ExonRegion	0	7.14	2.75	4.76	3.73	14.52	1.66	8.86	4.50	4.16	1.72	1.74	9.88	6.89	9.93	6.86	6.68	7.71	10.66	4.31	3.80	5.97	4.57	11.88
28	E2_Da	NovelBoundary	0	11.19	3.16	0.00	5.83	12.48	7.72	14.88	5.87	3.01	8.17	5.26	0.00	0.00	14.83	0.00	4.36	0.00	3.52	0.00	9.14	2.53	2.57	12.89
29	E2a_E3a	KnownJunction	0	6.52	0.00	5.00	1.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.74	0.00	0.00	0.00	0.00	0.00	0.00
30	I2	Intron	0	8.02	4.44	2.98	5.16	11.87	6.16	8.70	5.99	8.92	5.13	4.08	21.34	18.40	10.86	3.78	6.20	8.31	4.26	2.67	7.66	4.70	5.45	6.55
31	I2_AR1	ActiveIntronRegion	0	6.51	3.13	1.40	3.64	12.21	4.32	6.79	4.22	6.42	4.56	4.47	14.74	11.71	11.07	2.73	6.40	6.94	5.23	2.45	8.62	5.65	4.16	6.47
32	I2_SR1	SilentIntronRegion	0	9.37	5.60	4.37	6.51	11.60	7.79	10.41	7.56	11.14	5.64	3.75	27.19	24.33	10.69	4.72	6.04	9.54	3.41	2.88	6.82	3.88	6.59	6.63
33	E3_Aa	NovelBoundary	0	31.19	2.89	5.32	5.49	19.44	8.86	7.86	15.07	13.08	4.67	11.95	44.26	27.92	14.77	0.00	11.54	3.83	4.60	4.42	5.50	11.18	2.82	8.37
34	ER3a	ExonRegion	0	10.46	3.89	16.90	3.13	4.80	4.15	6.23	8.08	3.38	15.85	13.30	24.19	13.52	11.13	4.61	5.68	17.28	11.14	5.06	4.38	5.06	4.23	6.39
35	E3_Da	KnownBoundary	0	23.93	14.47	28.92	8.02	7.30	15.33	17.67	11.38	4.86	22.40	23.48	56.42	27.27	20.84	4.45	12.56	25.90	21.14	4.71	8.25	11.18	11.02	8.54
36	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER3b	ExonRegion	0	15.84	7.66	19.28	9.86	29.25	10.76	14.39	12.13	18.22	16.08	33.12	44.67	22.43	34.19	12.96	21.15	26.74	21.37	18.42	12.38	15.35	14.90	29.61
38	E3_Ab	KnownBoundary	0	26.75	8.55	12.86	16.41	48.81	14.99	18.81	12.16	27.66	6.15	9.32	11.70	33.60	44.09	25.71	53.58	21.22	26.24	31.06	17.13	13.84	19.59	54.21
39	ER3c	ExonRegion	1	14.65	4.64	9.87	13.56	26.07	18.76	10.69	7.09	17.93	8.09	6.59	8.66	21.65	44.89	27.30	33.15	13.88	26.58	28.42	11.57	7.74	9.94	32.68
40	E3_Db	NovelBoundary	0	35.78	6.38	5.20	3.80	4.33	2.61	15.63	16.18	3.27	0.00	4.74	40.66	12.99	21.25	0.00	12.13	16.83	8.37	26.17	0.00	3.09	0.00	8.71
41	E3b_E4a	KnownJunction	0	0.00	3.35	7.57	12.85	10.44	17.04	0.00	3.57	7.52	11.47	2.68	0.00	0.00	17.07	27.07	11.71	12.53	19.94	16.94	12.91	3.15	5.08	8.62
42	I3	Intron	0	15.04	3.05	4.26	6.71	12.49	6.48	7.33	5.07	5.46	4.62	5.74	15.04	17.93	10.08	5.11	9.12	6.72	5.67	2.66	5.46	8.67	5.00	5.58
43	I3_SR1	SilentIntronRegion	0	20.60	3.96	2.13	1.58	7.29	1.40	6.19	2.01	2.87	3.33	5.27	15.57	19.66	11.70	3.19	8.10	3.86	3.94	4.96	2.48	10.30	4.87	4.55
44	I3_AR1	ActiveIntronRegion	0	28.32	5.24	8.92	10.94	20.40	9.21	13.70	10.57	8.14	5.92	5.41	23.18	28.52	13.79	4.90	13.22	9.80	5.21	4.09	6.95	10.31	6.05	7.40
45	I3_SR2	SilentIntronRegion	0	8.94	2.05	2.67	5.68	10.00	6.06	4.91	3.25	4.73	4.27	5.94	11.70	13.43	8.37	5.45	7.61	5.86	6.10	1.77	5.26	7.81	4.61	4.99
46	Ix	Intron	0	11.64	6.74	6.33	9.94	16.13	7.32	6.18	5.24	6.93	6.82	4.66	13.77	15.92	11.55	6.08	7.39	9.45	4.78	1.92	4.97	4.16	6.75	3.98
47	Ix_SR1	SilentIntronRegion	0	13.63	7.68	5.35	6.77	18.42	8.58	6.27	1.67	5.40	8.28	6.73	12.14	13.33	15.44	7.24	5.36	14.31	6.61	2.76	7.75	8.32	4.55	6.39
48	Ix_AR1	ActiveIntronRegion	0	13.82	10.89	6.63	20.20	49.74	15.64	4.91	6.41	10.10	6.14	10.01	3.57	22.62	5.25	2.22	23.08	6.21	11.96	6.37	12.01	6.48	9.56	0.00
49	Ix_AR2	ActiveIntronRegion	0	13.59	9.95	8.58	20.52	27.60	8.78	6.20	8.92	11.83	4.23	7.12	4.56	7.41	3.25	4.58	25.03	8.17	10.60	4.36	11.31	6.61	6.25	1.08
50	Ix_AR3	ActiveIntronRegion	0	10.83	6.16	6.58	10.25	13.66	6.56	6.23	6.30	7.16	6.49	3.65	15.17	17.01	10.84	5.91	6.78	7.96	3.65	1.37	3.50	2.54	7.46	3.43
51	E4_Aa	NovelBoundary	0	10.74	2.50	3.52	5.29	7.89	12.89	15.24	9.04	14.41	10.02	12.27	0.00	12.17	26.66	4.70	16.41	9.26	15.92	14.40	5.88	12.11	7.96	4.35
52	ER4a	ExonRegion	0	29.23	29.65	39.68	37.10	33.92	40.26	24.02	32.22	34.28	39.06	43.46	33.82	27.70	75.53	49.16	46.22	55.85	68.43	28.00	33.10	46.94	33.61	49.32
53	E4_Da	KnownBoundary	0	38.45	54.53	65.28	48.71	62.31	66.27	47.39	55.04	31.34	47.63	52.86	69.02	53.73	125.73	68.73	37.94	60.96	48.79	20.99	15.92	48.68	21.43	40.72
54	ER4b	ExonRegion	0	58.74	63.41	62.17	60.81	70.25	81.68	55.05	51.82	50.78	56.73	69.77	60.30	64.14	82.59	50.88	33.25	56.80	51.40	29.02	31.17	46.15	30.48	46.66
55	E4_Ab	KnownBoundary	0	128.17	102.42	70.16	84.14	102.38	48.67	54.81	82.19	56.68	94.39	87.76	81.18	80.03	98.53	84.55	42.30	53.11	59.82	38.59	42.06	27.99	43.41	42.43
56	ER4c	ExonRegion	0	68.12	87.33	67.27	80.68	105.85	74.10	59.62	55.83	49.05	67.55	99.97	68.06	54.21	86.59	66.26	54.29	51.62	56.03	28.19	30.08	30.47	33.87	41.86
57	E4_Db	KnownBoundary	0	48.08	110.31	49.08	79.11	138.03	90.46	73.84	44.07	40.05	62.29	88.71	25.21	73.37	78.35	51.80	53.23	38.06	33.08	27.58	36.30	16.31	45.13	23.73
58	E4b_E5b	KnownJunction	0	6.52	5.53	0.00	9.79	3.90	4.20	10.38	1.77	2.95	2.34	11.42	0.00	0.00	0.00	0.00	3.42	7.85	0.00	0.00	0.00	0.00	0.00	0.00
59	ER4d	ExonRegion	0	54.44	80.17	36.87	52.43	77.20	57.82	51.94	39.57	26.75	45.05	66.91	53.52	69.45	57.92	45.49	35.35	31.89	25.36	19.72	22.63	10.08	40.87	22.62
60	E4_Dc	NovelBoundary	0	51.42	47.36	14.28	26.17	40.41	22.71	32.50	18.07	20.25	24.82	35.32	31.96	34.41	7.00	10.63	24.87	4.77	1.87	4.80	18.60	12.11	23.02	12.46
61	E4c_E5b	KnownJunction	0	33.64	20.52	23.83	9.92	16.47	26.80	15.72	19.18	11.49	17.35	15.21	42.16	25.32	21.84	18.17	19.23	8.88	6.18	4.33	6.01	0.00	29.09	4.01
62	E4c_E6a	NovelJunction	0	14.45	15.13	8.37	3.30	3.90	2.21	1.94	1.52	0.00	10.07	6.79	0.00	0.00	2.24	0.00	3.93	3.93	1.62	3.95	2.68	0.00	4.71	0.00
63	E4_Dd	NovelBoundary	1	25.19	56.70	22.06	40.99	37.78	13.97	38.11	19.26	23.81	27.02	19.74	51.92	62.17	36.85	19.41	16.41	14.21	5.51	4.80	7.86	11.18	25.23	0.00
64	E4d_E5b	NovelJunction	0	28.89	2.76	4.32	9.66	20.46	0.00	4.15	4.52	0.00	0.00	5.00	0.00	0.00	2.41	0.00	0.00	0.00	0.00	8.28	0.00	3.15	0.00	0.00
65	E4d_E6a	KnownJunction	0	10.74	11.64	1.42	4.63	7.89	8.52	0.00	1.81	1.07	4.67	9.63	0.00	0.00	0.00	8.90	0.00	0.00	0.00	9.60	0.00	0.00	2.45	0.00
66	ER4e	ExonRegion	0	25.90	18.90	5.55	15.15	15.11	15.43	9.81	11.49	3.78	12.21	19.67	15.54	12.97	5.25	13.31	5.94	3.30	2.83	6.37	5.38	3.50	4.78	5.70
67	Ix	Intron	0	30.15	39.73	22.35	42.97	62.91	34.90	32.56	26.06	24.80	29.63	15.45	58.22	41.29	23.07	14.52	12.05	11.47	6.61	7.38	16.27	4.42	21.88	8.62
68	Ix_AR1	ActiveIntronRegion	0	30.20	39.79	22.38	43.03	63.00	34.95	32.60	26.09	24.84	29.67	15.47	58.31	41.35	23.10	14.54	12.07	11.49	6.62	7.39	16.29	4.43	21.91	8.63
69	E5_Aa	NovelBoundary	0	45.93	47.62	29.09	45.35	37.01	34.58	36.13	39.68	27.89	38.49	30.74	36.31	62.17	14.07	22.37	36.40	16.08	17.45	9.60	24.48	14.83	20.08	15.62
70	ER5a	ExonRegion	0	74.05	31.65	45.25	52.96	66.62	45.06	35.86	37.39	28.64	38.57	25.96	44.38	22.94	24.39	29.94	20.59	14.75	11.58	16.44	14.17	8.35	23.13	13.42
71	E5_Ab	KnownBoundary	0	76.01	30.19	55.47	65.93	110.10	40.94	33.39	46.54	29.17	36.59	13.06	32.86	11.69	26.43	26.58	7.86	17.77	14.84	23.25	18.28	0.00	13.96	16.13
72	ER5b	ExonRegion	0	148.43	118.80	69.98	61.70	116.31	66.81	50.58	66.90	45.27	66.12	65.82	110.38	54.98	68.98	91.18	40.52	47.10	15.26	17.64	23.52	20.08	60.48	19.18
73	E5_Da	NovelBoundary	0	58.31	44.33	24.75	61.00	48.98	41.17	10.73	27.19	16.23	30.33	12.00	15.30	6.82	2.47	8.90	4.02	4.30	3.61	4.24	14.83	0.00	13.23	4.35
74	E5a_E6a	KnownJunction	0	137.28	137.94	71.91	36.29	64.26	40.09	21.29	51.55	40.28	54.29	55.22	61.52	28.24	73.05	97.90	27.86	51.05	13.10	13.84	18.22	8.28	88.60	34.74
75	Ix	Intron	0	30.84	41.27	8.55	11.63	13.92	0.95	5.51	1.34	0.96	8.00	7.04	22.40	6.03	10.69	4.26	1.55	1.72	4.32	4.97	6.64	1.15	6.51	0.00
76	Ix_AR1	ActiveIntronRegion	0	31.42	42.09	8.73	11.85	14.21	0.97	5.60	1.37	0.98	8.16	7.19	22.82	6.16	10.91	4.35	1.58	1.75	4.41	5.08	6.76	1.17	6.64	0.00
77	E6_Aa	NovelBoundary	0	97.20	152.01	26.14	40.02	39.64	2.61	10.86	40.79	18.72	37.93	14.74	6.30	31.33	9.30	4.45	0.00	0.00	9.04	13.74	14.13	2.90	13.59	8.19
78	ER6a	ExonRegion	0	172.76	286.63	92.65	77.38	125.29	63.47	50.74	64.64	51.09	79.32	69.39	122.90	57.04	50.23	100.38	29.35	41.59	20.72	15.85	24.07	22.01	85.74	29.04
79	E6_Da	KnownBoundary	0	207.74	372.24	132.79	119.07	176.23	79.67	65.67	91.35	57.06	121.09	66.33	213.22	81.33	57.10	110.64	32.04	54.14	18.41	12.14	35.03	22.67	93.26	7.51
80	ER6b	ExonRegion	1	115.63	201.62	88.72	96.90	94.34	38.30	30.21	73.07	46.28	94.02	29.68	129.25	53.31	35.51	82.25	22.02	20.63	7.18	10.38	17.53	7.05	87.09	12.38
81	ER6c	ExonRegion	1	9.88	16.95	11.03	5.00	23.19	5.50	1.32	2.88	3.29	5.35	1.29	17.32	6.25	5.41	16.44	0.00	3.30	0.00	0.00	2.13	0.00	5.56	0.00
82	ER6d	ExonRegion	1	3.53	16.27	4.08	2.27	13.38	5.50	0.88	0.00	1.65	4.59	0.00	15.87	4.69	2.17	7.74	0.00	1.10	0.00	0.00	0.71	0.00	3.47	0.00
83	ER6e	ExonRegion	0	2.12	6.10	1.23	0.00	0.00	1.83	0.00	0.00	1.24	2.87	0.00	2.16	4.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.08	0.00