Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC35A3 Gene 0 32.81 53.77 30.97 59.77 50.46 20.60 41.04 26.46 23.57 24.75 45.32 115.34 99.90 45.42 37.41 33.91 32.46 15.74 13.39 30.67 11.95 65.50 25.80 2 370155 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 465289 Transcript 0 24.37 33.02 19.89 37.98 33.76 12.00 22.27 16.74 15.73 13.93 22.01 47.85 38.71 21.05 17.98 17.30 15.99 9.67 7.78 15.67 5.80 33.47 16.45 4 427993 Transcript 0 1.80 2.67 1.68 4.62 2.44 1.54 1.55 3.31 0.93 2.86 16.08 4.20 14.57 21.21 17.75 47.84 12.77 21.25 21.85 13.76 6.83 11.17 29.23 5 370153 Transcript 0 0.00 0.96 0.00 1.09 0.00 2.15 0.00 0.00 0.00 0.00 0.92 3.45 0.91 2.62 0.48 0.76 0.12 0.00 0.00 0.94 0.01 0.01 0.69 6 422078 Transcript 0 1.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 370156 Transcript 0 0.00 2.56 1.34 1.36 0.00 0.00 2.97 0.00 0.31 2.28 2.12 8.33 1.17 3.50 0.00 3.66 0.00 0.00 0.00 1.33 0.00 0.00 0.00 8 496646 Transcript 0 0.00 0.00 0.00 3.30 0.00 2.56 0.00 3.82 1.19 2.90 6.58 0.00 26.46 7.42 0.00 0.00 8.13 2.11 0.00 3.26 0.00 5.57 0.00 9 ER1a ExonRegion 0 3.39 2.17 0.00 1.08 1.43 0.00 0.35 0.00 0.49 0.46 0.56 0.00 0.00 1.74 3.19 0.81 0.00 1.96 0.00 2.27 0.60 1.67 0.78 10 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 11 ER1b ExonRegion 0 6.49 12.00 1.63 1.83 4.02 9.25 12.73 0.78 5.01 3.98 16.87 1.40 2.33 14.70 17.19 19.65 18.51 11.57 8.89 8.42 19.99 10.91 23.00 12 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 9.16 0.00 0.00 2.12 5.56 0.00 4.77 0.00 0.00 2.68 7.97 0.00 0.00 13 E1a_E5a KnownJunction 0 0.00 12.50 1.24 0.00 7.22 0.00 0.00 6.94 4.75 6.47 52.91 5.85 11.85 21.66 4.45 16.41 22.25 10.40 0.00 2.88 31.69 14.70 0.00 14 E2_Aa NovelBoundary 0 0.00 6.12 1.54 5.63 0.00 8.63 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.09 4.19 0.00 3.26 0.00 3.12 3.93 15 ER2a ExonRegion 0 0.00 1.92 0.00 0.35 0.00 1.41 0.00 0.00 0.00 0.00 1.84 0.60 1.82 2.24 0.97 1.51 0.24 0.00 0.00 1.87 0.02 0.02 1.39 16 E2a_E5a KnownJunction 0 0.00 0.00 0.00 1.83 0.00 2.90 0.00 0.00 0.00 0.00 0.00 6.30 0.00 3.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E3_Aa NovelBoundary 0 20.00 6.31 5.47 19.61 3.90 9.94 32.55 10.93 13.34 8.41 2.21 0.00 0.00 4.47 4.82 8.12 4.30 14.72 16.09 11.25 2.66 2.27 3.84 18 ER3a ExonRegion 0 1.62 2.42 1.50 4.96 4.11 4.63 2.39 5.24 1.24 3.89 21.13 4.94 11.09 23.02 22.71 28.67 25.04 16.46 19.34 14.64 7.26 8.71 22.54 19 E3_Da NovelBoundary 0 2.82 2.43 5.41 8.12 0.00 0.00 0.00 6.90 3.27 12.87 0.00 0.00 0.00 0.00 5.56 15.12 0.00 7.42 0.00 0.00 0.00 0.00 0.00 20 E3a_E5a KnownJunction 1 3.78 5.59 3.55 8.89 3.23 0.00 0.00 4.68 1.56 4.70 17.95 7.65 32.63 38.50 24.97 114.84 8.51 47.30 46.21 23.97 5.25 24.80 65.13 21 ER4a ExonRegion 0 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E4_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 10.42 1.97 1.36 1.26 0.00 0.00 0.00 0.00 0.00 16.06 0.00 0.00 4.33 5.88 0.00 2.57 4.18 23 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER5a ExonRegion 0 5.00 14.94 12.40 25.32 10.66 3.36 14.66 6.78 16.99 16.14 113.92 66.71 71.35 76.51 38.68 80.83 92.93 41.10 20.75 46.58 71.09 49.50 42.49 25 E5_Ab KnownBoundary 0 3.78 38.41 20.73 42.15 11.71 0.00 43.01 8.67 27.40 18.72 86.65 65.12 72.24 65.87 81.71 68.02 57.22 37.85 21.27 71.14 23.35 47.09 74.44 26 ER5b ExonRegion 0 11.24 30.08 19.54 40.77 33.65 28.93 45.55 18.14 23.89 15.58 83.14 101.91 128.76 64.18 49.01 46.01 50.11 23.04 11.60 59.57 19.34 74.87 39.51 27 E5a_E6a KnownJunction 0 35.78 54.33 26.79 51.68 19.86 0.00 27.07 29.16 27.52 21.49 127.03 179.76 202.26 78.52 45.74 36.74 32.73 8.25 14.87 51.52 18.84 84.93 23.22 28 E5a_E7a NovelJunction 0 0.00 0.00 1.83 3.30 0.00 0.00 8.17 6.61 0.00 0.00 9.16 6.15 6.66 2.12 9.02 0.00 3.83 0.00 0.00 0.00 3.15 2.94 0.00 29 E5b_E6a KnownJunction 0 0.00 3.09 1.45 0.00 0.00 0.00 1.63 0.00 0.00 2.26 2.32 11.25 0.00 2.12 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER5c ExonRegion 0 0.00 2.03 1.23 2.73 0.00 0.00 4.30 0.00 0.62 2.29 1.93 5.41 2.35 4.87 0.00 2.97 0.00 0.00 0.00 2.66 0.00 0.00 0.00 31 ER6a ExonRegion 0 27.68 53.00 22.11 42.56 27.91 4.79 44.01 25.30 30.00 27.08 86.00 200.38 187.99 67.06 57.80 46.02 59.42 10.11 15.04 49.11 10.48 99.51 27.19 32 E6a_E7a KnownJunction 0 45.27 50.85 14.10 43.65 47.45 13.29 34.09 16.88 23.61 36.34 81.39 191.61 145.77 75.70 64.03 27.77 59.75 11.73 7.91 68.65 10.81 46.97 24.50 33 I6 Intron 0 2.16 0.83 1.86 3.31 1.09 0.00 2.97 0.53 0.00 0.00 3.15 3.64 7.26 2.14 2.58 4.24 12.79 2.62 2.60 6.08 0.90 1.70 2.40 34 I6_SR1 SilentIntronRegion 0 2.17 0.83 1.87 3.33 1.10 0.00 2.98 0.53 0.00 0.00 3.17 3.65 7.29 2.15 2.59 4.26 12.85 2.63 2.61 6.10 0.90 1.71 2.41 35 E7_Aa NovelBoundary 0 0.00 10.06 3.10 9.36 8.66 0.00 23.76 2.14 1.77 1.37 2.42 6.30 41.72 4.83 6.30 0.00 4.77 0.00 4.80 8.56 0.00 3.12 4.35 36 ER7a ExonRegion 1 22.56 39.63 15.80 44.60 36.68 13.64 37.02 18.82 25.85 38.72 59.90 217.04 192.86 65.24 50.88 27.28 61.40 10.22 14.48 44.37 12.43 77.50 28.98 37 E7_Da NovelBoundary 0 3.78 2.83 7.16 20.91 0.00 0.00 10.07 3.86 8.19 8.33 18.58 53.42 88.79 52.62 32.02 16.24 17.77 2.40 4.14 37.52 5.62 23.94 7.09 38 E7a_E8a KnownJunction 0 15.78 50.12 14.01 45.88 28.01 2.90 10.16 16.88 19.44 23.21 43.70 47.72 55.84 41.14 20.64 25.04 58.16 13.47 13.08 45.32 8.59 72.56 46.61 39 I7 Intron 0 11.37 8.99 3.48 11.64 16.30 4.54 17.17 4.14 6.74 4.45 22.08 57.57 60.36 30.33 13.91 23.95 23.95 10.33 5.66 17.73 6.06 17.24 10.19 40 I7_SR1 SilentIntronRegion 0 9.07 6.65 4.42 11.51 15.57 4.61 18.29 3.20 6.76 3.97 19.25 62.80 69.23 32.44 15.45 20.99 22.91 8.21 5.83 17.39 5.35 14.71 10.05 41 I7_AR1 ActiveIntronRegion 0 15.66 12.30 3.21 12.22 18.28 3.48 19.03 5.90 5.77 5.32 22.84 59.72 65.14 31.74 10.33 28.62 27.00 12.20 8.73 18.15 6.10 22.92 14.26 42 I7_SR2 SilentIntronRegion 0 12.97 11.24 1.92 11.56 16.47 5.07 14.02 4.78 7.29 4.78 26.84 46.85 41.39 25.70 13.34 26.55 24.04 13.08 3.48 18.15 7.34 18.39 7.95 43 E8_Aa NovelBoundary 0 22.74 22.76 4.91 15.28 25.04 0.00 21.07 0.00 9.49 2.47 25.11 19.66 77.43 43.15 9.89 21.28 8.98 3.61 0.00 17.71 8.22 27.86 7.51 44 ER8a ExonRegion 0 40.51 69.54 16.37 49.00 59.93 25.84 44.33 20.56 29.34 32.06 104.98 184.63 123.69 95.82 43.16 51.35 90.14 19.82 10.72 45.75 25.09 73.64 38.91 45 E8a_E9a KnownJunction 0 48.60 79.00 20.49 73.65 84.97 22.37 72.96 34.54 33.28 36.69 138.61 214.57 297.87 92.77 39.31 82.71 98.92 20.93 15.72 69.61 22.12 102.69 44.39 46 E8a_E11a KnownJunction 0 7.48 3.35 0.00 1.76 7.98 0.00 0.00 0.00 3.59 0.00 9.11 0.00 0.00 3.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 3.12 4.35 47 ER9a ExonRegion 0 45.40 58.72 18.07 67.05 74.72 24.80 68.45 29.99 29.98 30.22 110.27 180.21 222.31 84.82 40.84 81.14 80.87 21.02 15.61 44.68 30.52 97.61 32.82 48 E9_Da KnownBoundary 0 51.79 26.31 5.56 32.13 52.38 18.63 58.07 22.30 18.75 10.66 48.28 112.99 107.46 36.73 20.52 55.54 40.77 10.99 19.20 20.65 26.56 62.15 10.84 49 E9a_E9b NovelJunction 0 0.00 0.00 3.52 22.08 0.00 0.00 0.00 4.76 1.79 4.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.00 0.00 0.00 50 E9_Ab KnownBoundary 0 23.49 47.82 17.53 45.22 41.94 11.30 38.82 10.56 16.23 21.30 95.92 130.09 63.96 40.79 8.90 38.79 28.42 13.60 9.13 23.46 14.27 35.15 8.37 51 ER9b ExonRegion 0 52.44 55.13 19.88 63.75 81.16 23.64 70.46 26.89 32.11 27.78 129.07 223.69 182.39 79.76 36.75 76.95 61.25 24.43 19.11 41.84 34.28 76.63 23.49 52 ER9c ExonRegion 0 28.21 60.46 27.80 58.60 52.56 25.57 57.95 22.25 33.10 27.48 107.11 238.37 157.32 96.54 44.18 69.72 70.54 18.16 11.97 45.11 16.75 74.86 37.13 53 E9b_E10a KnownJunction 0 17.11 61.96 32.17 49.61 65.37 27.09 64.39 29.37 28.70 30.27 143.35 215.62 148.04 102.60 47.59 68.44 107.43 13.14 16.94 47.11 21.25 75.26 22.11 54 E9b_E11a KnownJunction 0 0.00 0.00 0.00 3.30 0.00 2.56 0.00 3.82 1.19 2.90 6.58 0.00 26.46 7.42 0.00 0.00 8.13 2.11 0.00 3.26 0.00 5.57 0.00 55 ER10a ExonRegion 0 33.15 77.87 34.92 57.55 50.52 19.69 45.40 20.77 24.79 27.87 131.47 250.79 206.40 87.30 35.10 62.15 77.72 13.10 12.53 40.50 13.45 104.50 34.06 56 E10_Da NovelBoundary 0 3.48 12.04 7.01 12.79 26.83 16.92 20.31 4.19 3.24 9.03 11.69 69.17 34.09 7.18 11.13 30.59 18.05 0.00 4.61 9.46 0.00 8.51 7.34 57 E10a_E11a KnownJunction 1 51.05 97.22 36.04 43.22 37.44 13.86 48.53 10.72 13.19 17.92 121.82 260.63 127.26 67.99 44.26 27.94 86.40 9.04 3.58 40.72 16.80 47.64 27.83 58 I10 Intron 0 5.74 6.46 2.43 5.79 7.44 3.13 9.90 3.01 3.01 3.36 7.05 21.42 25.54 11.48 6.46 8.06 9.10 4.54 2.31 10.64 1.18 6.23 2.27 59 I10_SR1 SilentIntronRegion 0 4.45 5.85 2.31 5.87 6.19 1.80 12.91 1.99 1.94 3.12 7.60 20.99 24.79 10.10 7.29 6.06 8.35 4.20 2.67 9.27 1.08 4.82 2.27 60 I10_AR1 ActiveIntronRegion 0 2.48 3.46 1.35 2.33 3.98 4.29 7.88 1.91 2.54 2.17 6.96 22.32 31.63 8.83 3.74 6.92 11.56 2.64 0.68 10.82 1.17 3.98 1.24 61 I10_AR2 ActiveIntronRegion 0 4.69 3.19 1.52 7.13 7.42 4.41 5.14 3.57 3.40 3.16 7.50 21.88 21.56 13.13 6.54 9.34 9.15 4.68 3.83 9.24 1.22 5.20 3.53 62 I10_SR2 SilentIntronRegion 0 15.83 16.12 6.28 9.11 16.41 2.74 14.85 6.16 6.06 6.65 6.36 22.26 26.37 17.05 8.60 13.78 8.89 8.80 1.91 16.23 1.65 14.96 2.20 63 I10_AR3 ActiveIntronRegion 0 1.33 11.52 0.00 2.56 1.68 1.15 6.67 1.62 0.00 0.00 2.43 13.47 19.98 4.93 5.70 0.00 2.08 0.00 0.00 8.04 0.00 2.62 0.00 64 E11_Aa NovelBoundary 0 23.49 39.99 2.90 25.50 56.62 16.41 23.72 12.65 14.03 10.61 12.37 23.86 26.46 17.25 23.98 0.00 8.79 5.51 9.04 14.57 0.00 15.80 4.18 65 ER11a ExonRegion 0 28.32 55.60 29.13 58.84 56.93 21.73 49.67 24.20 20.07 26.32 56.88 188.48 178.77 59.83 51.61 29.56 30.69 7.89 11.08 29.33 8.17 92.79 18.65 66 E11_Da KnownBoundary 0 7.19 5.39 8.78 33.23 24.19 5.00 9.05 16.92 5.09 16.06 6.32 18.31 53.41 15.19 9.39 4.36 4.77 4.19 0.00 5.82 0.00 18.80 3.76 67 E11_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 E11_Dc KnownBoundary 0 0.00 27.03 6.98 18.98 7.39 5.56 6.54 10.56 1.16 8.62 4.69 42.91 22.08 2.30 5.32 4.36 13.00 4.02 9.60 8.88 0.00 22.23 7.51 69 ER11b ExonRegion 1 4.23 38.64 17.56 53.61 42.81 17.73 24.71 29.38 8.23 21.03 16.11 132.77 171.97 27.61 23.21 8.92 26.41 11.09 6.37 29.08 0.00 50.00 20.56 70 ER11c ExonRegion 1 4.23 37.62 14.09 51.11 45.49 11.92 24.49 27.66 6.18 21.79 15.46 125.55 187.60 25.17 21.76 8.92 26.41 12.93 6.37 27.66 0.00 47.92 20.56 71 ER11d ExonRegion 0 41.26 62.69 39.77 74.20 59.54 24.00 44.53 33.49 27.87 27.86 34.91 95.70 77.42 39.09 35.96 34.60 27.21 19.35 15.56 31.35 11.60 63.81 28.55 72 IG37_AR1 ActiveIntergenicRegion 0 4.07 11.40 5.64 5.56 9.75 4.25 9.69 3.89 5.79 3.40 0.23 16.98 6.36 3.55 3.13 1.64 0.00 1.46 0.67 0.00 0.00 2.69 0.00 73 IG37_AR3 ActiveIntergenicRegion 0 3.59 12.65 1.25 10.74 6.22 6.25 9.47 5.15 10.46 8.73 1.33 16.21 15.82 7.58 2.07 3.59 3.64 2.74 0.99 5.71 0.00 7.05 2.41 74 IG37_AR4 ActiveIntergenicRegion 0 6.11 4.61 8.29 5.25 4.66 8.22 4.68 9.36 10.97 7.06 14.83 6.79 3.79 17.37 14.70 10.46 9.20 5.60 7.81 11.58 3.20 5.47 4.74