Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ABCD3 Gene 0 37.06 29.74 33.37 58.24 50.91 66.32 58.02 28.59 33.34 40.55 69.19 91.71 49.56 62.45 51.90 50.58 51.76 31.91 23.18 25.30 22.48 61.12 30.57 2 394233 Transcript 0 2.74 0.00 0.00 2.76 0.00 0.00 0.00 5.50 4.92 5.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 3 454898 Transcript 0 1.49 1.44 0.00 0.00 0.00 0.01 1.32 0.00 0.00 0.38 0.86 0.84 0.00 1.89 2.07 3.48 2.43 0.00 0.00 0.00 0.00 1.31 2.55 4 370214 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 315713 Transcript 0 16.28 16.33 2.10 0.52 8.17 9.12 17.70 3.22 2.37 1.31 5.02 13.38 7.11 11.16 16.96 18.78 8.76 4.57 8.13 13.15 6.46 15.57 15.72 6 468860 Transcript 0 0.82 0.00 0.58 0.00 0.00 0.00 0.65 0.00 0.00 0.18 0.41 0.46 2.34 0.29 1.95 0.31 0.00 0.87 0.00 0.00 0.67 0.00 0.00 7 493416 Transcript 0 5.39 2.55 1.72 4.07 5.46 3.49 11.84 3.91 7.91 5.02 9.01 14.31 4.86 7.87 3.07 4.89 9.94 2.75 2.95 1.99 2.79 16.29 10.19 8 484213 Transcript 0 2.45 1.27 1.26 3.39 2.77 4.34 7.89 1.38 2.83 2.26 4.37 7.46 6.34 5.76 1.74 4.81 3.09 4.83 1.86 1.91 3.83 5.37 3.57 9 464165 Transcript 0 0.55 0.21 0.99 3.05 3.28 1.83 4.29 2.23 1.81 1.20 1.07 2.46 3.44 0.75 0.95 1.82 0.81 1.59 0.24 1.02 0.91 3.88 1.30 10 ER1a ExonRegion 0 3.11 4.94 0.00 0.07 4.57 4.20 8.14 0.00 0.00 0.55 6.61 0.00 0.00 5.39 8.74 4.25 4.26 4.51 1.81 2.48 8.12 3.61 10.15 11 E1_Ab KnownBoundary 0 9.56 15.19 0.00 0.00 8.23 5.28 25.31 2.05 5.12 1.67 19.43 5.40 0.00 15.89 10.38 12.48 8.13 30.72 3.58 9.33 31.01 17.15 28.17 12 E1_Ac KnownBoundary 0 22.00 0.00 0.00 3.30 4.33 21.35 26.59 0.00 1.19 7.55 9.42 5.85 5.68 7.42 16.69 17.26 13.46 7.79 3.76 0.00 11.74 8.45 4.35 13 ER1b ExonRegion 0 7.76 5.42 0.00 1.99 5.35 6.88 17.65 0.00 0.57 5.16 13.69 0.00 1.17 9.20 12.69 10.53 10.73 6.85 2.12 5.14 18.09 6.77 13.58 14 ER1c ExonRegion 0 4.97 3.79 3.13 4.69 6.78 10.89 12.27 2.76 7.98 8.24 23.14 11.96 15.10 25.21 12.78 22.25 18.05 10.92 1.84 6.44 17.73 6.86 3.50 15 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E1a_E5a KnownJunction 1 0.00 0.00 5.44 10.99 0.00 10.39 2.25 6.86 11.55 7.47 76.55 17.86 0.00 48.68 8.90 19.99 35.16 3.77 4.80 14.64 65.11 4.96 0.00 17 ER2a ExonRegion 0 0.00 0.00 2.31 0.00 0.00 0.00 0.56 0.00 0.00 0.72 1.63 1.50 2.91 1.07 0.94 1.25 0.00 3.48 0.00 0.00 0.93 0.00 0.00 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 3.27 0.00 0.00 0.00 0.00 0.00 2.05 0.00 0.00 0.00 0.00 0.33 6.47 0.10 6.86 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 20 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER4a ExonRegion 0 4.47 4.32 0.00 0.00 0.00 0.03 2.19 0.00 0.00 1.15 2.58 2.53 0.00 5.68 1.77 2.06 3.16 0.00 0.00 0.00 0.00 0.81 3.30 22 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 8.37 4.11 0.00 0.00 0.00 0.00 3.12 4.35 23 ER5a ExonRegion 1 0.11 1.76 9.41 15.99 7.23 26.02 8.05 11.63 19.49 30.04 95.39 55.58 16.48 80.15 34.74 39.92 49.51 30.76 10.24 32.72 62.78 38.01 20.56 24 E5a_E6a KnownJunction 1 0.00 3.29 10.61 17.21 19.44 32.03 10.38 14.33 27.69 37.53 99.66 86.73 39.28 132.44 40.67 59.64 72.56 78.64 17.13 51.90 59.18 61.48 39.27 25 ER6a ExonRegion 0 8.12 4.95 13.52 26.89 23.35 66.70 33.07 22.24 38.38 54.08 120.89 102.03 59.93 110.21 46.24 98.89 100.86 77.10 23.36 41.31 54.20 65.60 65.61 26 E6a_E7a KnownJunction 0 6.52 15.66 14.99 33.03 28.69 100.79 64.52 29.86 39.35 53.32 173.15 128.74 37.98 89.23 30.04 67.67 78.73 41.16 30.87 30.55 59.49 34.78 27.74 27 ER7a ExonRegion 1 13.51 20.82 11.69 30.90 27.36 71.58 62.96 26.80 43.19 66.96 168.84 145.06 79.20 115.24 37.81 74.04 137.27 39.76 26.99 49.20 51.65 75.26 27.78 28 E7a_E8a KnownJunction 1 14.15 23.15 20.93 35.26 18.08 55.76 56.66 28.46 63.92 70.67 182.36 195.36 80.68 124.02 40.42 92.20 164.94 59.94 26.35 43.46 35.52 100.97 19.12 29 ER8a ExonRegion 0 18.14 25.27 25.23 41.20 42.12 78.51 56.59 35.16 59.60 51.40 186.06 232.12 90.52 122.27 53.71 105.64 138.26 66.44 39.23 48.88 37.97 119.53 80.76 30 E8a_E9a KnownJunction 1 31.12 18.88 23.06 52.74 26.91 96.59 58.69 48.75 57.15 61.97 150.99 207.22 140.90 168.40 45.12 94.33 133.52 32.50 36.42 54.71 34.41 92.65 47.97 31 ER9a ExonRegion 1 19.72 16.50 28.30 49.77 49.75 99.36 59.74 43.62 57.33 68.66 174.47 275.14 98.30 140.19 51.04 94.56 121.12 50.66 38.35 49.83 30.78 111.66 53.16 32 E9a_E10a KnownJunction 0 42.08 26.71 35.01 74.42 65.03 136.63 94.82 42.43 74.62 68.26 159.57 323.21 152.10 127.44 75.04 84.51 112.67 66.04 26.54 43.27 21.56 119.28 58.39 33 ER10a ExonRegion 1 31.15 33.24 31.78 69.15 62.83 106.34 76.72 39.22 68.05 62.54 158.95 299.11 107.18 157.12 53.73 112.50 149.84 63.71 43.49 59.05 40.76 134.50 78.38 34 E10_Da KnownBoundary 1 29.04 32.49 31.25 78.68 65.45 104.54 127.28 38.40 60.36 70.16 114.66 264.24 137.49 185.06 61.69 155.00 128.00 57.16 64.85 50.11 71.54 100.85 83.49 35 ER10b ExonRegion 1 18.80 43.98 24.76 66.62 52.77 117.41 118.85 36.54 56.44 65.08 128.52 269.94 109.51 158.52 42.84 123.93 109.08 52.12 36.00 57.00 55.40 101.95 61.46 36 E10b_E11a KnownJunction 1 21.19 28.35 25.63 68.79 30.73 124.30 143.09 34.63 56.13 60.82 115.98 281.04 73.70 164.40 60.20 104.42 79.94 40.75 17.04 66.15 40.96 112.36 50.88 37 ER11a ExonRegion 0 20.20 30.36 26.61 58.13 57.22 106.75 105.01 30.75 50.23 53.88 159.99 217.23 80.80 151.47 76.91 106.53 137.19 66.42 38.34 53.27 62.01 92.99 55.07 38 E11a_E12a KnownJunction 0 3.26 0.00 0.00 0.00 4.33 5.45 2.12 1.77 1.74 0.00 2.26 6.30 0.00 7.59 14.96 7.18 4.30 0.00 0.00 2.49 0.00 11.33 0.00 39 E11a_E13b KnownJunction 1 20.82 43.81 30.16 51.84 41.60 138.33 107.27 23.17 45.31 53.83 182.20 181.86 95.12 175.35 40.67 128.17 170.08 88.96 82.36 45.45 81.18 73.79 66.75 40 E12_Aa NovelBoundary 0 0.00 8.81 0.00 3.60 8.32 13.57 20.67 1.56 6.45 11.42 5.26 19.21 7.63 14.54 6.30 7.86 7.20 8.83 7.91 9.72 6.30 2.63 12.04 41 ER12a ExonRegion 0 29.29 32.67 4.19 1.04 12.00 12.78 33.28 4.68 3.00 2.61 7.77 20.46 14.21 14.73 18.96 30.39 13.22 9.15 16.26 23.80 12.92 19.81 31.44 42 E12_Da NovelBoundary 0 0.00 0.00 0.00 1.30 12.48 2.10 32.46 10.51 6.71 8.00 6.26 5.70 12.99 12.01 0.00 3.67 13.74 7.92 0.00 9.40 5.56 29.64 14.26 43 I12 Intron 0 3.67 2.41 2.94 6.70 6.57 3.49 13.45 4.25 5.61 3.91 5.64 14.09 8.14 6.93 2.33 5.53 4.47 3.78 3.51 3.96 2.89 15.08 9.20 44 I12_SR1 SilentIntronRegion 0 1.99 2.71 1.14 4.46 5.87 2.15 14.00 5.04 4.76 2.81 4.54 15.62 8.65 6.25 1.35 3.96 4.65 2.09 1.50 4.17 2.07 16.00 4.60 45 I12_AR1 ActiveIntronRegion 0 6.60 1.90 5.22 10.69 7.97 5.37 13.92 3.86 7.07 5.35 6.59 11.21 6.38 8.90 3.45 8.56 4.61 6.50 6.73 3.77 4.74 13.95 14.57 46 I12_SR2 SilentIntronRegion 0 2.10 2.71 4.44 4.35 5.28 3.97 8.71 1.29 4.94 4.66 8.39 16.63 12.14 3.33 3.61 3.00 2.95 3.01 2.63 3.58 0.50 14.44 14.94 47 E13_Aa NovelBoundary 0 31.19 3.22 5.09 5.03 19.35 0.00 26.28 2.55 9.43 1.42 4.95 6.00 20.29 4.89 0.00 4.36 0.00 7.83 4.24 0.00 2.97 17.39 3.50 48 ER13a ExonRegion 0 5.39 2.55 1.72 4.07 5.46 3.49 11.84 3.91 7.91 5.02 9.01 14.31 4.86 7.87 3.07 4.89 9.94 2.75 2.95 1.99 2.79 16.29 10.19 49 E13_Ab KnownBoundary 0 0.00 3.35 1.27 4.86 12.14 0.00 19.96 4.44 5.50 3.47 12.00 24.01 0.00 9.01 0.00 0.00 8.98 0.00 9.41 0.00 2.66 17.27 7.60 50 ER13b ExonRegion 1 24.10 52.04 32.64 65.87 74.85 136.62 87.40 37.71 55.29 63.02 168.08 181.14 76.06 160.00 48.46 133.01 136.38 84.94 50.29 52.86 67.23 115.44 77.26 51 E13a_E14b KnownJunction 0 55.57 61.96 46.42 87.63 132.68 169.56 169.36 36.31 60.79 79.38 186.73 174.06 110.38 151.22 85.67 186.19 135.86 61.81 60.43 53.56 69.01 109.73 48.32 52 E13a_E18a KnownJunction 0 2.74 0.00 0.00 2.76 0.00 0.00 0.00 5.50 4.92 5.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 53 I13 Intron 0 0.85 3.76 1.18 4.25 3.01 2.66 10.87 2.90 1.48 3.30 2.95 21.45 8.97 3.87 0.33 3.35 2.92 2.74 0.00 2.91 0.53 5.03 1.89 54 I13_AR1 ActiveIntronRegion 0 0.58 4.44 1.49 4.00 4.19 2.07 10.35 3.51 1.02 2.85 3.09 21.65 11.30 3.50 0.03 2.15 2.89 2.14 0.00 2.85 0.00 4.94 2.52 55 I13_SR2 SilentIntronRegion 0 2.28 1.72 0.72 5.72 1.60 6.52 15.20 3.60 2.37 4.71 4.12 27.19 4.40 4.75 1.53 3.39 4.40 4.01 0.00 4.78 1.21 8.12 0.71 56 I13_AR2 ActiveIntronRegion 0 0.67 3.28 2.12 2.08 0.00 0.00 10.80 0.00 1.57 0.00 3.60 29.32 9.49 6.13 0.00 7.30 4.65 3.19 0.00 3.24 1.55 3.36 0.00 57 E14_Aa NovelBoundary 0 0.00 0.00 1.71 11.55 0.00 10.22 14.84 6.00 7.12 8.97 21.43 38.41 13.64 11.30 4.45 19.99 26.37 16.66 16.94 10.93 21.25 18.49 4.35 58 ER14a ExonRegion 0 4.90 2.54 2.52 6.78 4.65 8.69 15.78 2.76 5.25 4.53 8.74 14.93 12.68 11.52 2.51 9.62 6.18 9.66 3.72 3.82 7.66 10.75 7.15 59 E14_Ab KnownBoundary 0 14.37 8.81 0.00 3.83 11.12 2.27 36.92 8.30 9.95 5.13 0.00 24.31 15.10 7.95 4.45 8.03 4.39 0.00 0.00 14.83 11.49 11.70 3.93 60 ER14b ExonRegion 0 51.75 65.90 41.64 85.55 123.08 143.86 120.90 40.86 58.91 88.16 160.32 192.38 107.87 165.97 69.29 137.02 151.22 79.83 56.69 53.31 64.77 95.42 78.27 61 E14a_E15a KnownJunction 1 69.27 102.15 40.98 88.63 124.96 141.34 146.93 40.29 55.24 98.69 176.20 188.61 217.52 190.01 68.73 138.68 141.28 69.19 30.59 57.08 63.94 66.50 57.71 62 ER15a ExonRegion 1 57.06 65.31 37.02 80.20 72.82 114.90 113.82 48.99 60.06 95.13 164.49 251.05 155.98 155.38 55.83 151.92 146.32 53.93 54.11 56.50 63.66 154.98 75.05 63 E15a_E16a KnownJunction 1 67.49 61.44 34.09 79.41 80.56 118.40 100.69 39.97 69.82 98.48 161.20 230.63 123.37 204.78 81.59 224.98 137.73 88.54 96.94 61.17 76.36 178.25 90.66 64 ER16a ExonRegion 0 50.11 71.55 32.20 88.82 67.44 147.85 116.35 36.44 50.88 75.17 151.61 182.24 111.32 151.03 60.01 163.13 120.11 100.89 57.17 50.72 84.71 100.31 65.74 65 E16a_E17a KnownJunction 0 49.42 77.88 50.23 93.86 115.70 223.17 181.91 46.78 46.85 71.35 156.14 228.07 112.49 137.80 54.64 149.19 102.85 102.10 28.05 57.46 90.57 70.97 48.23 66 ER17a ExonRegion 1 44.19 89.76 41.61 84.32 92.08 159.80 109.74 37.12 53.39 69.72 180.24 229.56 123.06 193.15 65.94 144.31 100.35 109.94 65.51 50.23 104.53 82.82 76.03 67 E17a_E18a KnownJunction 0 66.16 94.59 28.44 114.50 68.59 102.33 86.43 36.93 47.48 82.90 192.36 130.09 98.21 194.36 79.36 158.25 100.51 95.22 86.97 60.27 109.59 112.61 84.77 68 ER18a ExonRegion 1 63.13 91.64 48.27 105.52 79.17 87.58 77.35 42.18 53.57 81.26 217.03 164.05 111.80 185.77 72.75 164.18 129.81 123.02 61.94 74.40 88.05 110.88 95.92 69 E18a_E19a KnownJunction 1 98.39 165.69 54.49 94.49 87.69 126.97 135.98 50.48 49.36 66.86 179.73 135.19 83.11 186.12 68.36 137.66 112.95 118.89 67.67 62.19 78.52 99.93 79.22 70 ER19a ExonRegion 0 62.54 138.92 44.25 93.87 101.06 140.88 139.74 45.70 53.16 74.38 182.57 198.62 72.92 154.40 77.14 124.99 108.79 94.87 72.78 56.40 69.37 91.25 73.98 71 E19a_E20a KnownJunction 0 89.13 175.03 54.37 107.45 129.54 167.57 195.02 31.91 53.56 76.45 168.15 140.60 97.88 152.75 97.16 172.95 100.51 70.60 79.72 52.35 66.90 101.40 113.11 72 ER20a ExonRegion 0 80.92 131.48 64.56 107.16 115.64 156.79 151.06 45.56 56.14 80.28 197.64 184.95 101.13 189.74 94.15 163.98 110.22 77.09 65.95 72.24 60.74 130.81 116.78 73 E20a_E21a KnownJunction 0 86.68 128.00 69.66 126.19 118.85 139.29 161.59 61.08 64.70 89.91 216.84 234.98 165.57 164.87 85.42 163.97 147.36 95.88 64.57 79.58 55.04 137.22 84.77 74 ER21a ExonRegion 0 58.67 116.62 73.65 134.45 92.07 140.19 121.38 52.19 67.61 98.81 178.32 269.87 90.07 172.76 98.05 118.08 135.97 100.96 74.98 61.24 68.94 113.55 91.86 75 E21a_E22a KnownJunction 1 78.53 136.75 81.66 150.26 153.31 122.37 159.21 49.21 66.20 101.91 153.46 271.89 59.09 150.45 113.36 160.13 101.36 94.22 65.13 56.18 34.78 107.22 105.42 76 ER22a ExonRegion 0 77.70 117.42 52.52 133.52 138.04 118.72 147.82 50.41 48.08 87.60 158.23 214.83 58.34 196.17 111.26 170.72 125.88 111.37 49.47 61.09 44.81 110.65 93.62 77 E22a_E23a KnownJunction 1 124.02 123.66 56.95 119.83 206.03 211.53 212.78 52.99 35.33 100.09 191.73 309.70 80.51 215.85 118.80 200.37 149.42 98.53 47.06 86.22 65.61 123.14 77.60 78 ER23a ExonRegion 0 88.02 118.67 61.70 130.29 118.98 179.51 141.21 54.87 65.96 103.82 182.01 174.91 71.81 187.24 100.93 145.73 136.29 116.70 108.66 78.75 68.24 124.32 98.08 79 E23a_E24a KnownJunction 0 86.09 125.77 59.67 96.99 44.48 156.67 116.41 77.10 75.03 91.06 200.47 174.81 93.99 173.88 123.12 163.03 177.75 88.05 112.57 67.30 89.52 88.24 89.03 80 ER24a ExonRegion 0 66.97 83.38 57.51 108.32 84.78 140.65 110.79 55.84 77.27 93.87 206.13 135.12 85.83 200.51 105.73 161.96 170.52 140.78 80.38 91.63 95.49 120.55 86.31 81 E24a_E25a KnownJunction 0 92.39 82.29 72.29 139.88 184.30 259.91 138.10 69.25 98.29 97.13 229.95 205.57 107.62 206.08 99.02 241.13 208.98 140.73 136.57 111.15 111.57 164.84 107.47 82 I24_AR3 ActiveIntronRegion 0 10.92 2.75 4.37 3.60 4.54 0.56 4.29 2.78 1.81 2.74 0.60 5.07 2.45 0.48 1.55 2.49 1.27 1.36 1.47 0.66 0.00 0.80 0.23 83 ER25a ExonRegion 0 61.34 58.61 72.01 125.03 121.40 203.34 164.65 49.29 86.60 86.15 187.95 198.58 106.75 203.83 103.12 172.86 187.52 150.97 92.22 91.14 95.75 130.15 95.76 84 E25a_E26b KnownJunction 0 40.38 30.72 69.81 138.21 111.63 165.19 188.93 50.03 85.91 98.05 136.51 176.01 112.33 155.57 174.92 159.87 183.26 96.21 107.01 82.26 56.28 150.08 77.51 85 ER26a ExonRegion 0 0.55 0.21 0.99 3.05 3.28 1.83 4.29 2.23 1.81 1.20 1.07 2.46 3.44 0.75 0.95 1.82 0.81 1.59 0.24 1.02 0.91 3.88 1.30 86 E26_Ab KnownBoundary 0 3.11 0.00 3.25 3.03 4.33 2.16 2.12 0.00 1.59 0.00 2.68 6.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.33 0.00 87 ER26b ExonRegion 0 64.70 42.45 73.61 118.23 99.67 139.76 145.73 53.03 85.18 90.05 164.61 160.19 90.37 163.22 100.97 129.87 139.64 102.85 57.68 64.02 64.22 127.50 71.69 88 E26a_E27a KnownJunction 1 122.39 48.68 70.22 109.61 113.75 117.66 128.60 43.46 80.73 73.90 150.72 116.59 77.11 161.40 63.66 122.53 142.78 87.96 40.19 68.20 66.47 104.10 60.01 89 ER27a ExonRegion 0 125.01 66.11 117.44 188.48 157.99 177.92 146.53 91.64 92.38 110.50 137.74 213.92 123.01 108.94 174.63 84.00 96.53 40.36 44.03 48.85 21.59 163.80 50.43 90 E27_Da KnownBoundary 0 36.67 16.12 31.52 49.91 31.32 23.57 38.55 25.67 25.49 26.24 12.16 30.01 6.17 11.89 14.59 3.33 4.21 5.80 17.98 11.57 0.00 67.48 8.28 91 ER27b ExonRegion 1 28.82 15.60 22.69 35.66 21.21 23.49 18.28 12.79 12.36 20.12 7.35 32.02 23.03 9.06 27.31 1.78 3.30 6.04 6.56 2.60 0.65 28.10 4.61 92 ER27c ExonRegion 0 0.00 0.00 0.00 0.00 0.89 0.00 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00