Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 WDR47 Gene 0 33.96 140.50 47.18 78.55 86.30 369.57 90.06 84.73 141.38 96.38 58.63 66.77 42.83 40.87 26.62 51.39 36.51 143.75 27.97 110.69 51.97 64.41 39.77 2 400794 Transcript 0 0.00 0.34 0.00 0.62 0.00 2.23 2.44 0.70 3.77 0.98 0.00 0.00 0.00 4.10 0.00 3.79 0.00 2.76 0.00 7.52 1.99 2.60 0.00 3 357672 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 407372 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 369965 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 369962 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 361054 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 0.24 0.18 0.00 0.15 0.00 3.76 0.17 0.00 0.00 0.19 0.55 0.00 0.00 0.00 0.25 0.26 0.00 0.75 0.00 0.39 1.84 0.92 0.13 9 E1_Ab KnownBoundary 0 6.59 0.00 0.00 0.00 0.00 10.45 0.00 0.00 0.00 1.32 2.63 0.00 0.00 0.00 4.45 0.00 0.00 4.52 0.00 3.26 6.12 0.00 0.00 10 ER1b ExonRegion 0 3.62 20.12 0.64 8.64 18.38 117.17 18.15 6.64 12.03 7.58 7.48 0.00 2.22 14.70 11.61 25.42 6.69 68.95 8.13 23.29 39.43 14.26 27.13 11 E1_Ac KnownBoundary 0 5.63 64.53 3.08 19.58 63.92 382.17 55.95 14.09 32.84 17.22 23.74 0.00 6.82 35.20 41.66 62.29 22.63 189.86 26.73 84.37 102.55 45.07 85.53 12 ER1c ExonRegion 0 4.47 19.83 2.09 12.53 9.90 70.55 11.21 15.13 31.57 19.29 14.97 0.89 2.58 23.20 9.36 29.76 14.64 107.98 5.98 43.10 48.89 16.90 22.96 13 E1a_E2a KnownJunction 1 6.67 33.94 10.70 24.71 21.14 43.90 10.11 23.62 59.32 39.30 7.32 0.00 0.00 99.36 33.99 82.63 13.09 275.33 22.78 76.96 26.13 48.62 104.14 14 ER2a ExonRegion 0 4.07 51.12 13.16 33.43 35.55 232.83 36.33 38.46 99.58 47.08 45.52 38.63 15.56 29.24 14.40 37.39 25.79 144.99 13.05 94.24 33.61 51.96 41.38 15 E2a_E3a KnownJunction 0 21.78 114.45 11.32 29.50 36.93 164.00 33.52 35.24 132.61 67.67 56.54 25.51 40.91 41.67 23.49 27.69 29.92 106.45 17.22 103.10 19.46 48.25 32.69 16 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.21 0.00 3.21 0.00 0.00 6.30 0.00 2.47 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER3a ExonRegion 0 12.02 87.06 11.35 38.13 37.62 194.69 31.98 60.25 129.04 73.73 68.78 62.42 47.51 39.48 12.02 43.10 44.80 98.33 15.32 127.94 46.09 69.90 35.13 18 E3a_E4a KnownJunction 0 32.38 65.05 8.81 52.17 54.67 328.79 45.13 71.02 146.41 89.91 56.17 84.33 57.79 61.57 11.50 55.88 80.50 96.59 9.41 162.99 66.10 65.09 40.12 19 ER4a ExonRegion 0 24.55 86.27 10.39 62.44 56.85 364.67 79.50 55.90 150.93 102.03 91.92 81.60 63.51 54.90 16.76 51.19 63.42 208.47 25.97 140.50 61.08 98.86 54.86 20 E4a_E5a KnownJunction 0 3.56 91.63 13.96 60.40 33.70 254.29 65.10 42.63 122.13 83.25 61.44 67.52 67.04 48.27 22.62 35.89 54.51 216.72 35.67 140.94 62.58 55.91 53.61 21 E4b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 3.30 0.00 0.00 0.00 0.00 4.94 0.00 4.19 0.00 2.53 0.00 8.56 0.00 3.12 0.00 22 ER4b ExonRegion 0 0.00 0.68 0.00 1.23 0.00 4.45 2.71 1.40 4.23 1.97 0.00 0.00 0.00 3.25 0.00 3.40 0.00 2.99 0.00 6.48 3.99 2.08 0.00 23 ER5a ExonRegion 0 15.25 128.84 31.63 61.00 62.37 332.37 87.82 71.23 155.20 104.38 78.71 81.41 85.60 46.27 17.75 69.23 49.96 199.07 33.75 145.66 73.16 79.93 49.71 24 E5a_E6a KnownJunction 0 10.52 28.68 3.55 9.89 23.09 95.40 25.66 15.48 27.05 27.35 6.84 12.15 5.84 10.07 4.45 11.71 13.37 31.59 4.80 17.32 11.92 6.25 21.00 25 E5a_E6b KnownJunction 0 16.97 117.08 24.01 53.47 56.11 280.58 81.22 57.79 94.44 70.38 40.91 78.48 71.59 27.19 25.34 47.17 27.49 160.30 24.57 116.58 51.65 55.54 15.45 26 E6_Aa NovelBoundary 0 64.83 12.23 3.02 1.90 8.66 2.67 8.92 0.00 2.92 1.50 2.68 0.00 19.48 0.00 0.00 3.85 0.00 2.11 4.80 8.82 2.78 3.12 4.35 27 E6_Ab NovelBoundary 0 16.74 2.70 0.00 9.69 3.90 2.61 0.00 13.51 2.58 3.33 0.00 6.30 6.17 0.00 4.45 0.00 0.00 1.91 0.00 2.88 0.00 3.12 0.00 28 ER6a ExonRegion 0 7.94 47.79 7.66 24.19 36.12 153.12 39.72 35.00 50.33 45.02 20.30 35.72 21.11 20.30 12.33 22.29 15.68 47.58 7.17 46.28 23.14 21.88 19.82 29 ER6b ExonRegion 1 12.32 153.18 25.63 57.58 57.41 390.03 93.24 76.92 121.79 101.78 54.03 86.20 68.48 62.36 17.10 54.44 32.42 125.29 26.47 129.63 50.49 54.93 35.17 30 E6a_E7a KnownJunction 0 16.52 163.72 27.94 79.38 138.79 764.28 149.58 91.51 139.55 113.65 76.65 96.48 60.71 56.45 15.70 71.01 62.74 158.48 36.14 170.66 50.66 91.36 27.66 31 ER7a ExonRegion 0 18.27 125.76 32.59 72.89 102.14 435.04 98.30 91.73 183.48 117.87 82.65 92.22 56.41 63.30 23.66 93.26 44.52 234.87 43.62 157.35 79.09 108.38 74.76 32 E7a_E8a KnownJunction 1 13.19 103.73 40.92 57.37 62.82 297.04 77.59 79.68 159.23 108.98 114.61 85.53 27.27 50.62 9.15 28.28 47.31 119.92 17.88 130.14 98.35 75.13 36.11 33 ER8a ExonRegion 0 42.11 162.94 53.30 68.16 96.89 465.98 116.77 70.56 150.28 93.54 86.50 101.41 44.56 47.46 22.11 64.70 45.14 170.87 49.26 145.26 60.42 92.18 54.07 34 E8a_E9a KnownJunction 1 39.04 162.14 49.47 59.03 116.89 334.81 75.16 61.78 124.36 83.76 59.23 114.64 19.80 40.91 31.89 43.75 52.64 104.75 62.68 118.44 32.06 59.40 69.83 35 E8a_E11a NovelJunction 0 0.00 0.00 8.87 0.00 0.00 2.33 4.06 1.60 4.54 2.47 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.63 3.76 36 ER9a ExonRegion 0 23.67 133.47 40.55 52.70 62.21 315.61 91.77 51.26 106.25 75.32 66.18 95.42 54.24 34.28 16.76 37.66 46.73 116.38 29.55 96.14 33.06 50.94 48.45 37 E9a_E10a KnownJunction 1 16.60 179.31 48.05 67.79 59.68 451.73 103.25 48.30 102.63 82.04 76.39 71.42 25.97 51.09 10.51 26.49 40.67 108.77 42.54 101.56 28.48 72.87 53.27 38 ER10a ExonRegion 0 20.19 151.84 31.56 68.54 80.20 470.08 114.50 62.49 113.06 81.36 78.38 78.18 43.55 47.40 18.84 53.54 49.58 110.46 28.57 113.60 38.61 56.31 36.65 39 E10a_E11a KnownJunction 0 19.34 196.35 25.75 77.81 150.34 557.80 175.72 61.69 137.47 105.81 60.33 134.14 75.16 50.44 29.17 68.44 56.47 142.64 23.44 155.00 55.48 34.41 48.40 40 ER11a ExonRegion 0 26.67 147.64 37.89 86.67 74.62 393.54 106.80 71.32 143.14 98.89 74.30 96.34 44.28 60.01 24.18 63.76 43.86 177.42 31.33 138.05 72.42 57.35 36.22 41 E11a_E12a KnownJunction 1 29.49 210.09 41.69 70.89 86.93 398.97 95.17 79.48 120.98 89.72 64.96 128.29 27.11 55.74 34.98 44.26 24.87 136.30 22.78 101.37 67.65 28.35 31.84 42 ER12a ExonRegion 0 35.08 190.13 44.49 94.96 99.17 508.02 118.51 61.51 123.75 91.73 63.19 90.44 32.99 55.68 25.18 57.91 35.06 146.56 35.39 111.46 58.40 57.16 41.65 43 E12a_E13a KnownJunction 0 48.68 160.56 55.20 113.01 92.61 388.64 111.86 76.97 126.53 97.27 62.49 81.93 60.06 57.39 37.09 39.39 30.20 150.19 43.95 105.27 31.88 49.17 56.77 44 ER13a ExonRegion 0 33.56 146.88 36.66 86.36 59.76 337.56 76.88 71.05 128.26 90.41 47.63 67.24 19.68 45.02 30.07 54.26 36.41 136.26 34.99 113.18 75.88 65.88 45.47 45 E13a_E14a KnownJunction 0 48.53 150.70 39.41 52.67 35.23 217.94 37.54 63.91 82.03 68.20 32.75 20.11 6.82 13.48 28.56 31.62 32.26 90.87 18.64 91.08 47.57 38.39 15.62 46 E13b_E14b KnownJunction 0 0.00 5.20 0.00 0.00 11.04 15.90 1.81 0.00 0.00 1.10 2.05 12.30 6.33 0.00 0.00 3.33 3.65 0.00 3.76 2.56 7.41 0.00 3.50 47 ER13b ExonRegion 0 0.00 5.08 0.00 0.00 1.34 3.67 3.97 0.00 1.54 1.15 0.48 1.08 0.00 0.00 0.00 0.00 0.00 0.00 1.59 1.06 1.10 0.52 0.00 48 ER14a ExonRegion 0 24.13 134.22 52.45 63.51 32.11 245.73 63.81 81.24 109.93 83.49 32.86 34.64 25.33 16.24 31.91 48.74 33.01 102.00 31.22 94.04 74.49 39.17 34.07 49 ER14b ExonRegion 0 37.42 158.74 53.62 78.17 72.86 433.65 94.55 96.24 144.98 94.22 61.91 52.10 22.77 45.60 35.22 46.07 50.50 199.46 34.09 122.74 78.29 51.02 50.13 50 E14a_E15a KnownJunction 0 66.75 122.02 71.40 84.67 39.73 337.42 58.60 80.92 176.88 99.34 52.59 69.32 31.82 42.97 27.44 55.28 48.15 150.60 32.85 107.83 63.69 52.11 38.75 51 E15_Aa NovelBoundary 0 20.60 9.08 4.55 8.02 8.57 15.39 18.86 11.05 12.62 8.73 0.00 0.00 7.14 2.47 8.90 3.85 4.77 9.20 0.00 3.26 2.35 5.57 4.35 52 ER15a ExonRegion 0 64.83 187.71 85.08 122.42 140.21 448.84 111.95 135.14 177.34 125.15 47.58 61.40 32.74 34.31 43.23 43.08 28.56 110.24 25.19 94.41 35.35 65.36 31.30 53 ER15b ExonRegion 0 0.00 2.54 1.23 1.02 2.01 23.84 9.27 5.62 2.47 2.29 0.48 2.16 0.00 0.00 2.18 0.00 0.00 0.00 0.00 4.79 0.00 3.65 0.00