Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP5-1007M22.1 Gene 0 1.64 0.82 0.40 0.82 3.55 5.68 3.03 1.99 6.65 1.26 6.34 4.51 2.83 10.59 4.98 6.36 8.16 2.57 1.17 1.02 3.25 1.00 1.41 2 415584 Transcript 0 1.96 1.43 0.09 0.98 3.05 12.07 2.46 2.76 9.75 2.92 6.31 2.77 5.51 19.53 13.14 8.45 8.99 3.05 3.14 1.49 1.48 1.66 1.35 3 443562 Transcript 0 0.45 0.28 0.59 0.14 1.01 0.26 1.45 0.19 1.79 0.06 1.28 1.67 1.56 0.47 0.31 0.87 1.86 1.07 0.57 0.37 2.48 0.47 0.73 4 ER1a ExonRegion 0 1.11 1.44 0.39 0.10 3.72 5.58 2.64 2.66 8.31 2.24 12.04 3.38 3.55 19.63 11.76 10.88 23.47 3.40 1.03 2.11 6.14 1.56 1.79 5 E1a_E2a KnownJunction 0 3.78 3.09 0.00 1.50 4.33 19.31 1.90 4.31 21.04 4.73 7.37 0.00 13.15 35.85 27.57 19.31 7.76 6.51 8.28 3.20 0.00 3.12 3.33 6 E2_Ab NovelBoundary 0 0.00 2.37 0.00 3.33 3.90 30.32 5.87 5.96 14.55 6.72 6.90 12.15 0.00 18.78 17.80 7.26 12.06 0.00 7.34 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 2.78 2.03 0.06 2.73 6.06 31.27 4.53 6.82 16.25 6.88 9.36 8.43 8.64 38.04 24.89 10.79 10.42 4.96 6.37 2.13 0.00 2.41 1.24 8 ER2b ExonRegion 0 3.12 0.78 1.06 3.71 15.34 23.22 3.64 9.91 21.88 4.17 19.23 12.22 6.46 40.54 15.12 24.76 15.09 5.54 2.55 1.86 3.94 1.82 3.42 9 E2_Da NovelBoundary 0 0.00 2.43 0.00 1.37 4.07 2.90 2.03 11.87 16.98 8.97 24.69 23.56 12.34 29.43 17.80 15.81 45.44 3.90 12.52 7.73 5.50 0.00 0.00 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.35 0.00 0.00 12 Ix Intron 0 5.91 1.89 0.57 1.89 4.15 14.21 5.13 3.19 15.41 2.91 12.58 19.34 11.48 28.14 4.89 19.81 22.00 3.84 0.99 1.98 2.73 0.65 1.37 13 Ix_AR1 ActiveIntronRegion 0 5.94 1.90 0.57 1.90 4.17 14.30 5.16 3.21 15.50 2.93 12.66 19.46 11.55 28.31 4.92 19.92 22.14 3.87 0.99 1.99 2.75 0.65 1.37 14 Ix Intron 0 8.22 3.46 1.77 2.22 9.21 16.33 6.22 3.86 21.16 2.77 13.85 23.01 18.78 17.88 6.85 12.63 22.04 2.75 0.52 2.76 2.05 2.45 2.14 15 Ix_AR1 ActiveIntronRegion 0 5.46 2.94 1.91 0.50 6.23 9.28 6.33 5.35 24.56 3.60 16.43 11.88 26.26 22.20 3.02 17.22 25.10 2.40 1.08 3.78 2.75 3.54 2.46 16 Ix_SR1 SilentIntronRegion 0 9.09 3.62 1.73 2.76 10.14 18.55 6.19 3.39 20.12 2.51 13.06 26.52 16.46 16.55 8.05 11.21 21.11 2.86 0.34 2.44 1.84 2.11 2.04 17 I2 Intron 0 9.62 1.10 1.22 2.93 7.49 10.70 5.37 4.76 15.80 2.85 4.42 11.92 8.61 9.26 4.13 6.26 8.48 0.64 1.39 0.82 1.42 1.23 1.36 18 I2_SR1 SilentIntronRegion 0 11.37 1.13 2.25 3.51 11.40 18.00 7.36 6.36 23.98 4.43 6.92 15.35 13.07 15.29 5.40 9.36 12.02 1.36 1.57 1.58 2.72 1.42 2.18 19 I2_AR1 ActiveIntronRegion 0 6.66 1.65 0.00 4.92 6.17 8.17 2.94 4.62 18.99 3.79 3.93 17.54 9.11 9.89 3.72 9.33 9.15 0.51 2.35 0.00 0.81 1.92 1.09 20 I2_AR2 ActiveIntronRegion 0 11.97 2.56 0.00 1.57 3.23 4.02 1.16 0.57 1.85 0.00 0.00 10.82 3.07 3.05 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 I2_SR2 SilentIntronRegion 0 13.40 2.03 1.22 6.09 11.59 9.78 7.06 8.59 23.31 3.99 6.44 10.70 4.14 8.06 10.52 5.94 5.50 0.00 3.19 0.71 0.00 2.08 1.96 22 E3_Aa NovelBoundary 0 13.78 0.00 1.83 4.06 19.44 5.56 0.00 0.00 7.47 0.00 2.37 5.55 6.82 4.89 0.00 4.36 9.07 0.00 4.80 0.00 0.00 0.00 0.00 23 ER3a ExonRegion 0 2.12 0.58 0.00 0.58 1.15 4.19 3.22 0.00 3.17 0.73 2.76 2.04 2.21 4.13 1.49 1.27 3.31 0.39 0.00 0.00 1.26 1.19 0.42 24 E3_Da NovelBoundary 0 10.59 0.00 0.00 0.00 12.39 0.00 6.05 1.85 8.25 1.67 2.68 6.30 0.00 9.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER4a ExonRegion 0 0.65 0.00 0.00 0.00 0.83 0.57 1.23 0.80 3.83 0.00 0.00 2.20 3.58 0.41 0.63 3.67 4.04 0.00 0.98 0.00 3.31 0.06 2.78 26 E4_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 4.24 0.00 3.94 1.10 0.00 0.00 15.10 0.00 0.00 0.00 4.49 2.57 0.00 2.81 0.00 0.00 0.00 27 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E5_Aa NovelBoundary 0 27.12 42.82 51.27 30.13 69.44 82.57 50.79 29.29 50.81 48.92 13.64 31.21 20.13 15.30 22.25 8.20 22.16 16.75 13.08 32.09 2.66 4.84 3.93 29 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.18 0.00 0.00 0.00 0.61 0.00 0.00 0.00 1.01 0.15 0.00 0.00 1.42 0.00 2.27 30 E5_Da NovelBoundary 0 24.00 88.80 36.81 39.36 73.60 27.77 62.09 33.11 15.68 65.46 16.48 30.31 35.39 12.36 10.75 10.60 12.90 14.67 9.13 23.84 2.90 5.94 7.17 31 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.33 0.00 0.00 0.00 4.68 0.00 0.00 0.00 5.93 0.00 0.00 32 E6_Aa NovelBoundary 0 3.70 0.00 4.11 11.55 0.00 5.56 10.78 0.00 3.10 0.00 5.05 6.30 0.00 7.18 4.45 0.00 15.71 4.19 4.42 0.00 5.31 0.00 7.17 33 ER6a ExonRegion 0 2.95 2.27 1.35 1.12 3.14 1.02 7.92 0.72 6.14 0.48 6.71 9.13 0.87 3.38 1.81 3.31 5.18 8.40 3.55 2.96 5.05 0.69 0.82 34 E6_Da NovelBoundary 0 11.34 5.46 4.85 3.96 0.00 0.00 10.11 0.00 4.17 2.15 10.00 6.15 0.00 2.24 0.00 4.36 3.83 3.94 0.00 2.43 0.00 0.00 0.00 35 E6a_E7a KnownJunction 0 0.00 0.00 3.22 0.00 3.57 0.00 2.25 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 36 E7_Aa NovelBoundary 0 16.74 41.90 13.01 15.08 19.86 29.41 45.93 18.11 52.26 50.18 79.28 25.21 39.93 46.15 10.38 39.22 55.07 77.19 13.93 45.06 35.46 20.33 8.19 37 ER7a ExonRegion 0 0.00 0.00 0.18 0.01 0.58 0.51 0.17 0.00 1.02 0.00 0.83 2.00 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.46 0.00