Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-413E1.3 Gene 0 4.69 0.00 0.00 0.47 0.94 1.71 4.48 1.50 1.29 0.60 2.71 5.47 7.37 3.12 0.58 4.16 5.39 0.00 0.00 1.24 0.51 0.73 0.34 2 429074 Transcript 0 3.14 0.00 0.00 0.19 0.52 0.89 1.97 0.74 0.74 0.25 1.61 3.27 3.75 2.54 0.39 2.18 3.15 0.00 0.00 0.62 0.33 0.52 0.37 3 ER1a ExonRegion 0 0.22 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.15 0.00 0.00 5.82 3.40 2.38 1.80 0.00 3.07 0.00 0.00 0.00 0.00 0.00 2.48 4 E1_Da NovelBoundary 0 6.30 0.00 0.00 3.86 12.14 11.13 10.55 2.55 12.93 0.00 12.11 0.00 0.00 26.43 4.45 27.77 9.07 1.78 9.60 5.50 0.00 0.00 4.35 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 8.22 3.46 1.77 2.22 9.21 16.33 6.22 3.86 21.16 2.77 13.85 23.01 18.78 17.88 6.85 12.63 22.04 2.75 0.52 2.76 2.05 2.45 2.14 7 Ix_SR1 SilentIntronRegion 0 9.09 3.62 1.73 2.76 10.14 18.55 6.19 3.39 20.12 2.51 13.06 26.52 16.46 16.55 8.05 11.21 21.11 2.86 0.34 2.44 1.84 2.11 2.04 8 Ix_AR1 ActiveIntronRegion 0 5.46 2.94 1.91 0.50 6.23 9.28 6.33 5.35 24.56 3.60 16.43 11.88 26.26 22.20 3.02 17.22 25.10 2.40 1.08 3.78 2.75 3.54 2.46 9 E2_Aa NovelBoundary 0 13.34 0.00 0.00 1.63 12.22 5.11 4.46 11.17 13.77 4.51 21.53 18.76 13.64 11.95 0.00 6.84 23.09 2.45 4.71 0.00 6.24 9.37 4.18 10 ER2a ExonRegion 0 16.09 0.00 0.00 0.00 1.87 2.56 1.83 1.73 2.55 0.00 6.75 7.12 5.97 14.13 0.00 6.23 9.09 0.00 0.00 1.49 1.63 2.91 0.08 11 E2_Da NovelBoundary 0 14.89 7.63 0.00 2.06 3.99 2.21 7.99 2.55 22.71 0.00 12.79 6.30 8.28 21.54 0.00 15.47 0.00 0.00 0.00 6.46 2.35 0.00 3.50 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 Ix Intron 0 5.91 1.89 0.57 1.89 4.15 14.21 5.13 3.19 15.41 2.91 12.58 19.34 11.48 28.14 4.89 19.81 22.00 3.84 0.99 1.98 2.73 0.65 1.37 14 Ix_AR1 ActiveIntronRegion 0 5.94 1.90 0.57 1.90 4.17 14.30 5.16 3.21 15.50 2.93 12.66 19.46 11.55 28.31 4.92 19.92 22.14 3.87 0.99 1.99 2.75 0.65 1.37 15 Ix Intron 0 12.44 0.82 2.73 2.49 7.10 2.50 10.49 4.29 4.23 1.15 1.71 7.25 13.04 1.05 2.18 5.70 8.01 0.49 0.47 1.14 0.55 0.24 1.37 16 Ix_AR2 ActiveIntronRegion 0 35.11 3.74 5.82 7.58 13.92 2.55 13.94 6.86 3.71 2.71 1.16 11.01 13.84 0.39 2.86 7.50 7.58 0.65 0.40 1.37 0.00 0.00 1.05 17 Ix_SR4 SilentIntronRegion 0 13.78 1.32 4.07 3.72 7.95 2.35 9.79 4.62 6.75 2.12 1.16 8.35 18.31 0.90 2.47 4.18 2.77 0.00 0.52 0.42 0.24 0.19 0.79 18 Ix_AR4 ActiveIntronRegion 0 15.48 0.72 5.13 3.88 7.90 3.78 15.33 7.04 8.23 1.93 2.44 14.65 9.99 0.80 1.89 7.97 11.06 0.22 0.38 1.35 0.16 1.47 1.89 19 Ix_SR5 SilentIntronRegion 0 17.55 0.97 3.78 2.90 9.59 2.76 12.15 6.03 5.97 1.49 1.62 6.62 12.34 1.36 2.64 6.05 8.74 0.43 0.46 1.28 0.49 0.23 1.53 20 ER3a ExonRegion 0 3.61 0.00 0.00 0.00 0.91 2.49 6.76 0.01 2.43 1.16 3.29 3.90 6.85 1.30 0.00 7.07 4.60 0.00 0.00 2.17 0.71 0.71 0.00 21 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E4_Aa NovelBoundary 0 6.15 3.16 0.00 3.40 4.24 2.44 10.07 0.00 5.30 1.67 0.00 7.65 20.13 4.94 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 23 ER4a ExonRegion 0 2.06 0.00 0.00 1.33 0.87 1.20 5.19 3.37 0.02 0.56 1.26 6.08 10.01 0.00 0.95 1.94 5.29 0.00 0.00 0.70 0.00 0.00 0.00