Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EFCAB7 Gene 0 15.06 16.47 14.97 18.91 30.74 65.99 28.75 20.93 26.86 23.17 12.56 32.06 18.90 14.39 13.41 14.59 14.15 6.86 14.53 10.22 7.31 13.97 7.34 2 448122 Transcript 0 0.44 1.80 0.06 0.09 0.13 0.41 0.17 0.00 0.00 0.04 0.25 0.00 0.00 0.26 0.00 0.10 0.16 0.09 0.00 0.27 0.28 0.00 0.76 3 480886 Transcript 0 3.41 0.00 0.00 0.00 4.16 0.00 0.00 0.00 0.00 1.16 2.68 0.00 0.00 7.42 0.00 4.02 0.00 0.00 0.00 0.00 3.15 0.00 0.00 4 371088 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 493605 Transcript 0 1.00 2.75 3.47 2.91 5.51 7.63 7.57 5.96 3.62 0.94 1.43 7.68 4.19 2.01 1.29 0.61 4.20 0.93 0.00 4.75 0.00 1.81 2.41 6 496956 Transcript 0 0.04 0.98 0.00 0.00 2.57 12.31 3.62 0.00 2.73 0.84 2.64 10.57 16.42 0.00 0.17 7.77 2.60 0.00 0.00 0.49 0.93 2.44 0.00 7 460678 Transcript 0 0.57 1.34 0.86 0.97 0.90 4.33 2.17 1.26 1.39 1.12 1.04 3.25 0.65 1.41 0.33 1.42 1.94 1.10 0.76 1.59 1.12 0.76 2.09 8 461039 Transcript 0 9.14 6.32 5.04 9.29 16.70 25.71 15.92 12.36 13.54 8.52 3.01 13.80 11.75 3.10 4.31 4.15 2.64 1.80 3.17 4.50 1.24 3.21 1.68 9 ER1a ExonRegion 0 0.89 3.61 0.12 0.18 0.26 0.83 0.34 0.00 0.00 0.07 0.50 0.00 0.00 0.52 0.00 0.19 0.32 0.18 0.00 0.55 0.57 0.00 1.52 10 E1_Ac KnownBoundary 0 13.78 8.49 4.35 1.73 4.33 13.74 6.05 0.00 1.24 4.03 8.05 0.00 6.17 14.89 0.00 4.27 13.00 3.86 0.00 3.26 6.12 0.00 8.45 11 ER1b ExonRegion 0 6.35 6.10 3.68 1.36 2.68 7.34 2.65 0.00 0.00 1.15 4.40 0.00 0.00 8.75 0.00 3.47 8.80 1.85 0.00 2.13 4.41 0.00 2.94 12 ER1c ExonRegion 0 7.11 9.35 2.37 4.08 17.92 47.23 17.73 5.17 6.59 7.38 11.20 1.43 1.10 9.80 3.34 12.07 13.17 7.27 12.12 4.60 10.99 5.81 5.45 13 E1_Da KnownBoundary 1 40.16 42.43 9.20 15.82 82.43 308.23 120.83 11.42 20.60 27.24 21.95 6.30 0.00 60.63 4.45 54.69 49.18 22.18 57.13 26.65 65.67 24.13 40.29 14 E1a_E2a KnownJunction 0 3.41 0.00 0.00 0.00 4.16 0.00 0.00 0.00 0.00 1.16 2.68 0.00 0.00 7.42 0.00 4.02 0.00 0.00 0.00 0.00 3.15 0.00 0.00 15 ER1d ExonRegion 1 19.93 32.44 23.19 13.96 63.56 236.02 84.06 23.53 23.09 36.75 28.19 9.06 14.43 55.87 23.25 72.66 29.30 27.23 46.21 25.40 44.24 26.38 32.48 16 E1b_E2a KnownJunction 0 3.78 8.88 35.84 18.88 24.70 55.37 36.48 33.31 26.68 34.54 18.43 11.10 26.46 29.96 0.00 50.50 16.08 39.13 17.13 14.19 14.15 2.39 11.10 17 ER2a ExonRegion 0 7.60 19.32 27.10 24.37 29.03 66.84 22.67 26.42 32.65 33.89 35.22 25.45 21.73 38.53 15.85 44.27 40.10 29.04 40.53 20.53 40.49 26.56 19.70 18 E2a_E3a KnownJunction 0 17.26 45.45 19.51 30.70 107.22 242.02 70.09 26.21 33.36 35.59 24.64 38.56 62.17 33.43 15.20 69.21 26.65 37.39 27.95 26.46 22.43 46.11 11.61 19 E2a_E4a NovelJunction 0 0.00 3.09 7.13 8.19 0.00 2.67 17.36 0.00 0.00 3.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.18 4.05 3.20 0.00 0.00 0.00 20 ER3a ExonRegion 0 16.79 41.32 22.63 21.50 61.62 176.81 55.89 28.85 33.51 53.07 28.70 63.94 47.10 33.00 21.03 23.85 26.03 16.47 20.31 18.20 8.87 38.27 11.61 21 E3a_E4a KnownJunction 0 20.45 48.61 16.14 12.59 74.28 124.64 47.61 41.77 25.35 38.41 11.11 46.82 34.09 28.49 20.15 20.76 17.58 17.24 18.64 17.45 2.78 24.31 20.49 22 ER4a ExonRegion 1 16.31 37.66 13.52 16.35 52.52 121.23 38.30 38.28 33.44 45.92 17.40 86.27 21.71 27.61 18.70 20.14 16.99 13.48 20.41 22.69 12.00 17.67 22.41 23 ER4b ExonRegion 0 18.66 48.60 17.05 34.30 34.83 114.58 70.24 42.95 48.79 49.55 40.66 91.28 31.89 49.81 29.01 31.80 25.09 16.08 33.45 16.77 10.10 37.16 20.70 24 E4b_E5a KnownJunction 0 28.23 82.81 21.11 42.22 43.04 133.56 106.52 45.06 45.98 47.89 29.59 114.34 56.00 53.92 26.33 41.36 37.49 19.98 60.24 17.26 3.09 60.31 11.10 25 ER5a ExonRegion 1 20.50 40.34 36.38 40.07 50.36 132.27 56.12 38.19 47.05 47.49 35.20 94.48 57.42 55.68 21.24 44.94 33.12 23.95 37.76 20.50 25.75 35.52 21.46 26 E5_Ab KnownBoundary 1 14.22 74.59 35.51 31.06 66.47 124.42 59.80 63.79 59.40 46.18 29.38 106.83 21.26 93.00 25.84 39.73 41.14 22.22 36.33 18.22 31.01 22.41 39.69 27 ER5b ExonRegion 1 14.85 36.60 35.28 35.74 53.22 156.41 77.82 48.04 52.70 53.86 36.05 93.56 18.96 52.58 26.19 41.03 44.38 16.86 42.87 14.45 22.83 34.78 25.21 28 E5a_E6a KnownJunction 0 11.34 32.69 42.10 54.54 70.54 169.16 87.35 40.91 38.17 60.60 35.64 100.38 41.23 31.02 29.05 40.16 39.64 15.84 59.39 27.48 20.76 28.72 28.68 29 ER6a ExonRegion 0 17.42 29.93 37.42 46.69 61.75 158.04 71.94 33.95 38.07 61.90 42.92 94.58 39.32 41.85 23.81 55.17 40.20 22.84 58.07 21.82 31.76 28.47 26.13 30 E6_Ab KnownBoundary 1 28.67 33.61 35.72 50.48 82.09 173.59 80.99 32.69 41.49 65.44 54.75 102.33 34.41 61.33 17.06 63.91 44.04 25.16 74.45 22.43 31.94 28.96 26.80 31 ER6b ExonRegion 0 25.30 49.83 19.06 30.87 69.12 152.80 75.71 47.23 48.30 46.73 34.89 98.90 49.22 50.78 23.24 43.90 39.41 17.16 36.31 14.74 17.18 22.04 30.99 32 E6_Da KnownBoundary 0 3.78 0.00 4.49 2.66 8.66 2.90 6.36 6.08 2.69 1.58 4.63 0.00 0.00 2.47 4.45 4.36 9.35 2.20 0.00 2.88 0.00 3.12 4.35 33 E6a_E7a KnownJunction 0 45.19 49.40 12.77 33.03 84.64 172.23 56.31 43.21 44.44 36.29 22.27 69.62 35.22 36.85 11.50 15.89 9.35 7.01 26.82 11.76 21.00 8.08 34.66 34 ER6c ExonRegion 0 1.00 2.75 3.47 2.91 5.51 7.63 7.57 5.96 3.62 0.94 1.43 7.68 4.19 2.01 1.29 0.61 4.20 0.93 0.00 4.75 0.00 1.81 2.41 35 E6_Db NovelBoundary 0 0.00 0.00 1.83 0.00 0.00 8.35 28.22 8.30 2.92 1.67 0.00 0.00 0.00 0.00 0.00 16.32 0.00 2.53 0.00 17.64 0.00 0.00 0.00 36 E7_Aa NovelBoundary 0 0.00 3.22 9.91 3.56 15.87 0.00 5.56 1.56 4.08 3.55 7.53 0.00 6.82 0.00 0.00 4.36 0.00 0.00 3.48 2.43 0.00 0.00 3.33 37 ER7a ExonRegion 0 18.30 27.67 22.33 39.25 71.34 141.71 59.27 36.29 46.40 42.91 34.27 90.92 43.40 26.25 26.50 28.95 32.10 12.00 42.13 18.14 13.44 24.83 17.74 38 E7_Da NovelBoundary 0 9.41 11.05 13.57 9.72 0.00 18.17 6.18 1.64 22.71 3.33 10.21 26.71 13.31 2.18 15.33 11.88 3.55 6.34 4.52 5.75 2.84 0.00 0.00 39 E7a_E10a KnownJunction 0 26.38 47.43 21.67 37.92 58.91 116.18 29.37 35.28 41.49 36.02 36.06 67.67 32.30 24.78 18.30 11.45 28.61 11.28 36.61 14.70 5.99 21.92 21.08 40 Ix Intron 0 3.09 4.16 3.74 5.58 9.70 17.48 9.29 3.92 7.21 4.00 3.50 16.95 10.04 4.69 3.23 6.08 3.09 1.61 3.35 2.36 1.29 4.26 2.23 41 Ix_SR1 SilentIntronRegion 0 3.48 4.44 3.36 5.35 9.92 16.95 8.93 3.85 6.64 4.03 3.37 16.00 9.51 4.53 3.18 5.83 2.83 1.66 3.22 2.16 1.32 4.41 1.91 42 Ix_AR1 ActiveIntronRegion 0 1.43 3.01 5.41 6.64 8.79 19.90 10.91 4.23 9.71 3.87 4.13 21.12 12.38 5.41 3.47 7.19 4.23 1.43 3.96 3.26 1.17 3.67 3.65 43 E8_Aa NovelBoundary 0 2.74 6.05 7.66 9.92 8.23 30.78 6.76 2.22 15.48 11.71 9.05 18.91 0.00 4.71 0.00 12.82 12.62 6.43 4.14 8.69 19.89 0.00 11.95 44 ER8a ExonRegion 0 2.84 3.34 2.45 4.85 4.39 19.42 10.86 6.12 5.76 5.61 5.19 8.70 3.25 4.59 1.65 7.09 6.40 5.48 3.80 7.93 5.59 3.73 6.13 45 E8_Da NovelBoundary 0 6.82 3.35 8.87 6.73 8.40 28.51 11.61 14.62 11.11 2.85 4.16 6.15 0.00 4.77 4.45 12.30 7.95 1.70 8.75 11.31 0.00 6.12 3.24 46 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E9_Aa NovelBoundary 0 12.59 28.28 8.66 11.22 0.00 25.16 5.70 15.44 6.45 0.00 0.00 18.91 0.00 0.00 0.00 16.58 0.00 4.10 0.00 5.31 2.41 2.51 0.00 48 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.12 0.00 0.00 0.20 0.00 0.00 0.00 7.55 0.00 0.00 0.00 0.00 3.30 0.04 0.00 0.00 0.00 0.05 0.75 49 E9_Da NovelBoundary 0 9.56 27.30 3.67 1.30 15.11 24.36 1.77 2.38 2.58 4.78 2.21 6.30 0.00 9.71 0.00 0.00 8.42 0.00 0.00 0.00 6.30 0.00 0.00 50 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.59 51 E10_Aa NovelBoundary 0 7.56 0.00 7.95 3.26 11.80 25.78 4.15 2.14 11.57 3.04 7.48 0.00 12.66 2.12 0.00 4.36 0.00 0.00 0.00 2.49 0.00 3.00 0.00 52 ER10a ExonRegion 0 22.72 28.30 23.89 32.97 43.54 140.15 49.20 29.73 49.94 42.49 25.07 67.70 28.31 28.36 26.85 21.75 30.58 6.32 27.42 21.08 15.55 26.52 10.68 53 E10_Da KnownBoundary 0 0.00 3.35 1.39 3.26 3.06 24.87 14.00 0.00 9.03 2.85 4.79 5.85 6.82 0.00 0.00 11.28 4.21 0.00 0.00 2.56 3.15 5.69 0.00 54 E10a_E11b KnownJunction 0 10.37 29.34 13.54 37.92 42.78 157.92 33.78 18.44 39.29 30.17 19.11 43.66 13.47 3.00 23.98 11.96 0.00 10.24 9.04 9.52 2.53 34.54 7.60 55 E10a_E12a KnownJunction 0 0.00 3.35 1.83 0.00 0.00 2.21 0.00 0.00 1.19 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER10b ExonRegion 0 0.04 0.98 0.00 0.00 2.57 12.31 3.62 0.00 2.73 0.84 2.64 10.57 16.42 0.00 0.17 7.77 2.60 0.00 0.00 0.49 0.93 2.44 0.00 57 E10_Db NovelBoundary 0 0.00 8.75 3.10 4.99 17.06 48.72 35.37 4.89 1.79 0.00 0.00 18.76 6.82 9.48 0.00 7.86 0.00 0.00 0.00 0.00 0.00 6.12 3.33 58 Ix Intron 0 4.16 3.74 3.46 6.45 10.05 18.44 12.18 4.87 6.82 4.57 2.82 8.37 9.45 4.83 4.34 4.05 2.66 2.66 5.14 3.27 1.17 3.52 2.66 59 Ix_AR1 ActiveIntronRegion 0 3.16 3.09 1.63 9.35 11.73 19.23 13.73 5.17 9.12 5.75 2.60 11.96 14.11 4.34 4.93 3.18 1.22 1.85 5.43 4.15 0.20 4.46 2.42 60 Ix_SR2 SilentIntronRegion 0 4.39 4.63 5.00 5.82 9.73 18.99 11.64 5.89 6.63 4.79 2.76 7.90 7.64 5.37 3.95 4.33 3.39 3.53 6.01 3.13 1.57 3.66 3.01 61 E11_Aa NovelBoundary 0 3.63 15.52 7.30 11.72 7.56 21.18 10.16 13.64 10.19 7.41 0.00 0.00 0.00 4.71 5.44 8.20 0.00 0.00 4.80 0.00 0.00 7.84 0.00 62 ER11a ExonRegion 0 11.70 4.83 3.93 8.84 18.13 27.84 17.11 13.10 13.46 6.56 3.69 15.37 13.21 3.32 5.60 4.23 2.05 1.19 2.82 3.97 1.01 3.00 1.08 63 E11_Ab KnownBoundary 0 13.71 8.35 4.67 15.22 12.05 19.42 37.98 21.03 21.21 3.95 2.68 32.26 0.00 0.00 4.45 11.28 4.68 0.00 3.58 5.24 5.13 4.78 0.00 64 ER11b ExonRegion 0 35.94 30.56 27.74 49.70 78.86 180.21 59.31 39.60 58.34 54.34 20.74 78.40 43.61 21.47 26.20 23.02 25.17 7.36 28.73 22.09 13.62 38.51 5.99 65 E11_Da NovelBoundary 0 0.00 0.00 0.00 2.06 3.23 0.00 8.48 5.71 3.33 2.90 0.00 12.60 6.82 7.36 0.00 4.36 12.44 2.03 4.52 2.75 0.00 2.88 0.00 66 E11a_E12a KnownJunction 0 53.12 39.86 13.78 39.19 62.56 137.08 45.13 40.50 34.06 52.78 20.27 45.91 19.80 16.19 10.26 7.86 13.18 3.77 3.76 24.99 4.57 55.36 8.02 67 ER12a ExonRegion 0 70.73 28.14 30.33 38.00 69.71 185.20 69.71 27.99 56.61 47.61 25.00 58.64 40.60 27.50 33.78 31.12 20.50 11.53 29.71 23.58 4.01 39.77 12.78 68 E12a_E13a KnownJunction 0 81.79 46.18 53.78 58.70 59.25 131.23 83.56 34.38 50.38 55.44 26.90 83.28 54.05 25.25 15.58 26.06 38.99 14.09 40.94 20.26 3.15 33.98 31.33 69 ER13a ExonRegion 0 51.83 35.43 48.46 42.11 56.23 170.94 70.59 37.91 73.39 51.09 31.93 71.07 39.35 32.21 40.23 33.21 40.87 13.95 44.70 21.15 9.13 27.60 17.15 70 E13a_E14a KnownJunction 0 68.53 63.48 77.35 46.21 94.14 212.95 71.99 39.92 77.55 51.15 42.64 18.91 57.63 36.32 72.19 34.44 54.32 10.61 46.68 24.16 11.55 50.15 23.13 71 E14_Aa NovelBoundary 0 3.70 0.00 1.24 2.06 0.00 0.00 0.00 2.46 3.59 0.00 0.00 19.06 0.00 0.00 0.00 3.33 0.00 0.00 0.00 2.81 3.09 0.00 4.35 72 ER14a ExonRegion 0 39.49 34.17 52.81 52.82 78.79 146.70 54.47 44.59 89.65 58.02 37.30 87.79 38.57 39.04 59.35 42.01 51.29 11.90 47.92 22.95 16.12 34.19 17.14 73 E14_Da KnownBoundary 0 2.74 0.00 6.98 1.73 12.22 15.84 8.17 8.71 18.95 11.39 4.63 17.56 12.99 0.00 0.00 0.00 4.39 2.11 9.60 5.24 7.91 2.94 0.00 74 E14a_E14b KnownJunction 0 67.49 31.24 40.27 58.03 66.55 85.12 45.09 71.14 97.97 50.29 25.22 48.77 14.45 31.02 39.93 30.16 48.25 4.02 17.22 20.20 11.68 34.90 0.00 75 ER14b ExonRegion 0 6.59 7.81 6.15 9.73 15.28 23.58 14.72 11.61 13.61 10.48 2.33 12.24 10.30 2.88 3.02 4.07 3.24 2.42 3.52 5.04 1.47 3.41 2.28 76 E14_Ab KnownBoundary 0 22.08 21.44 9.52 11.62 30.48 4.83 3.97 18.20 14.90 14.88 4.84 6.00 6.33 0.00 4.45 0.00 9.16 0.00 4.80 3.26 0.00 3.00 8.71 77 ER14c ExonRegion 1 80.05 52.74 51.27 59.48 118.21 154.07 61.30 73.23 88.06 61.71 33.78 69.39 36.47 28.64 65.05 28.28 42.20 6.82 27.89 21.32 9.62 41.63 11.28 78 E14_Db NovelBoundary 0 9.56 3.35 10.94 6.49 31.58 5.39 9.54 15.16 14.58 13.11 2.00 0.00 6.82 4.59 0.00 3.76 0.00 0.00 0.00 0.00 0.00 2.69 3.67 79 E14b_E16a KnownJunction 1 38.67 34.34 25.75 53.21 77.33 116.35 67.35 79.15 79.11 49.16 15.21 45.76 0.00 24.60 89.50 7.69 26.18 8.54 8.19 14.00 6.12 44.03 19.12 80 ER15a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81 Ix Intron 0 19.03 16.13 18.18 23.84 37.91 18.85 23.79 16.06 11.47 17.02 2.03 10.49 5.52 3.77 11.74 4.57 4.54 5.06 8.51 1.72 1.96 5.06 3.33 82 Ix_SR1 SilentIntronRegion 0 21.45 18.14 20.10 25.49 41.88 20.20 26.90 18.22 11.58 17.03 2.21 11.14 5.93 3.79 11.52 5.22 4.91 5.68 9.98 2.05 2.27 4.53 3.87 83 Ix_AR1 ActiveIntronRegion 0 13.23 11.32 13.60 19.93 28.44 15.67 16.34 10.88 11.25 17.07 1.62 8.97 4.54 3.72 12.33 3.02 3.68 3.59 4.98 0.93 1.23 6.39 2.04 84 E16_Aa NovelBoundary 0 12.37 18.29 20.43 29.23 36.76 8.35 30.34 17.99 6.19 32.56 0.00 17.41 6.82 0.00 4.45 4.19 4.02 0.00 4.80 0.00 0.00 0.00 0.00 85 ER16a ExonRegion 1 19.76 19.75 26.22 33.52 34.11 44.03 21.59 49.50 42.16 35.89 6.09 38.02 20.04 9.82 28.06 4.69 7.03 2.57 10.04 8.38 4.16 28.09 2.40