Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP4-604K5.2 Gene 0 355.57 171.36 213.99 152.14 283.26 271.04 218.81 225.43 172.04 213.24 392.73 542.57 390.01 356.39 440.98 378.05 277.67 139.82 122.44 89.38 390.58 968.30 474.08 2 469566 Transcript 1 22.05 23.66 9.87 2.32 31.32 37.56 52.66 1.13 5.87 6.15 38.69 9.45 1.41 6.39 10.47 24.42 11.97 13.35 13.91 10.68 18.27 5.83 17.50 3 331835 Transcript 0 2.48 1.40 4.46 8.88 2.94 3.62 3.59 4.53 1.98 5.57 26.69 7.80 6.24 38.74 35.35 142.69 10.49 11.55 6.35 0.84 279.96 208.76 154.93 4 370554 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 401030 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 361154 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 467557 Transcript 0 0.57 0.23 0.84 1.82 2.62 1.31 0.48 1.48 2.82 3.05 2.96 3.42 1.34 1.42 2.31 6.65 2.27 7.27 4.02 1.96 9.17 1.91 8.16 8 497861 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 2.40 1.80 0.94 1.25 3.39 2.72 2.43 0.20 0.89 0.13 3.74 0.00 2.81 2.71 0.92 1.93 1.87 0.25 1.27 1.74 0.40 1.32 0.00 10 E1_Ab KnownBoundary 0 10.45 5.66 1.83 5.46 15.37 12.44 14.22 0.00 2.84 0.00 8.05 0.00 0.00 4.89 8.90 7.69 4.58 1.58 4.80 8.88 2.41 5.51 0.00 11 ER1b ExonRegion 1 42.58 32.98 11.15 14.36 53.78 56.88 71.92 4.01 7.11 9.31 61.54 9.78 2.81 77.93 64.76 96.83 18.22 25.13 20.83 16.72 121.56 159.22 108.48 12 E1_Da KnownBoundary 1 6.37 14.41 8.13 24.31 14.77 21.24 40.41 8.46 2.37 11.31 35.32 6.30 13.96 54.09 53.40 206.01 8.60 27.69 29.93 6.52 168.28 221.60 314.05 13 E1a_E2a KnownJunction 1 41.71 45.52 18.80 3.40 59.25 72.40 102.90 2.05 10.85 12.17 73.65 18.91 0.00 10.07 20.03 46.91 22.07 26.45 26.54 19.62 36.14 10.35 35.00 14 ER1c ExonRegion 1 3.85 2.81 8.52 17.31 5.88 7.23 7.18 9.06 3.96 11.15 53.38 14.85 12.49 77.24 70.70 285.37 20.97 23.10 12.71 1.68 559.92 417.14 309.86 15 E1_Ac KnownBoundary 1 0.00 0.00 7.72 14.92 4.33 0.00 0.00 6.04 1.79 5.99 9.00 0.00 0.00 64.34 81.59 155.43 11.97 16.00 4.80 3.26 312.72 342.48 237.91 16 E1_Ad KnownBoundary 1 8.82 8.02 7.27 15.88 3.23 6.70 3.58 9.73 4.11 8.27 23.74 13.05 8.28 68.46 111.63 436.81 16.36 27.07 11.95 5.82 248.53 888.99 423.40 17 ER1d ExonRegion 1 19.58 20.59 18.53 30.32 10.70 16.73 14.07 16.64 4.32 12.19 32.62 9.74 4.69 176.42 195.47 512.69 33.01 37.65 24.29 7.45 534.67 1077.96 555.76 18 ER1e ExonRegion 1 827.04 390.51 161.85 92.59 245.20 584.59 362.68 161.68 128.92 188.81 403.88 34.78 72.04 573.05 811.78 843.40 604.12 83.66 173.47 112.80 920.97 1251.00 1033.51 19 E1_Ae KnownBoundary 1 1492.41 597.99 369.50 253.95 365.79 1167.06 492.86 414.89 342.21 441.23 513.87 93.78 203.40 613.69 911.06 1030.07 952.22 148.40 280.48 217.89 1130.16 1214.51 1514.26 20 ER1f ExonRegion 1 654.58 324.93 274.52 166.64 222.09 658.63 277.35 311.22 263.38 368.22 368.56 114.56 166.94 337.73 523.72 582.54 556.25 99.73 147.99 138.53 817.93 707.95 852.74 21 E1_Db KnownBoundary 0 13.78 0.00 3.13 1.73 0.00 0.00 4.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.20 0.00 0.00 11.92 0.00 4.27 22 E1b_E2a KnownJunction 0 417.93 204.31 254.51 156.92 176.40 250.03 185.31 286.29 226.47 327.66 340.82 177.36 169.14 185.65 367.51 377.00 220.94 118.18 60.90 75.04 657.43 409.65 443.12 23 E1b_E4a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 183.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 45.04 0.00 0.00 24 ER1g ExonRegion 0 1.13 0.47 1.68 2.27 0.90 2.63 0.96 2.97 2.16 1.94 3.45 1.13 2.68 2.84 4.61 9.29 4.55 9.90 8.05 3.91 18.34 3.81 12.14 25 E1c_E2a KnownJunction 0 0.00 0.00 0.00 1.37 4.33 0.00 0.00 0.00 3.47 4.16 2.47 5.70 0.00 0.00 0.00 4.02 0.00 4.64 0.00 0.00 0.00 0.00 4.18 26 ER2a ExonRegion 1 186.54 149.77 252.64 145.45 123.03 161.73 111.80 269.60 226.93 300.23 1012.04 227.99 206.36 378.69 358.59 431.57 788.20 236.00 125.38 138.43 1428.89 657.15 435.99 27 E2_Ab KnownBoundary 1 231.89 190.82 433.16 291.04 135.48 103.86 70.79 439.45 361.02 463.58 1750.65 399.73 300.63 1090.77 786.33 704.69 1368.58 499.55 356.06 327.96 2087.09 1374.02 733.87 28 ER2b ExonRegion 0 164.19 198.46 487.73 342.83 211.08 140.89 144.13 488.03 399.38 498.63 1175.09 649.18 528.92 1414.06 1390.80 1584.94 811.04 942.46 548.73 308.15 1421.21 2000.27 2066.86 29 E2a_E3a KnownJunction 0 3.33 0.00 2.45 0.00 0.00 0.00 0.00 2.09 10.27 0.00 26.27 12.45 54.70 12.89 35.60 27.94 8.04 6.80 0.00 3.20 9.45 19.41 14.85 30 E2a_E4a KnownJunction 1 138.47 207.53 487.03 382.57 541.94 241.85 315.41 518.52 415.16 492.14 919.81 1070.75 1021.36 895.17 1070.28 1790.30 576.34 1020.00 497.61 290.89 1159.62 1909.44 2293.88 31 I2_AR3 ActiveIntronRegion 0 83.18 4.07 9.44 7.77 26.76 1.83 29.92 5.19 2.47 6.08 11.60 19.92 30.49 2.60 13.06 28.53 9.90 6.10 4.78 4.26 0.44 5.42 6.17 32 ER3a ExonRegion 0 0.72 0.00 3.38 2.69 9.79 1.70 3.10 1.73 6.87 0.00 23.62 9.50 27.57 14.30 15.64 16.31 3.22 4.01 0.39 0.99 9.08 17.58 7.02 33 E3a_E4a KnownJunction 0 0.00 0.00 3.67 3.80 14.94 2.50 8.17 0.00 1.48 0.00 18.06 0.00 13.64 9.59 10.75 8.20 4.77 0.00 0.00 0.00 12.17 21.55 0.00 34 ER4a ExonRegion 0 221.71 215.40 453.48 335.91 901.81 811.14 584.20 448.37 355.85 437.17 880.98 937.53 979.48 878.62 817.65 1121.33 657.24 686.44 327.94 226.10 1245.51 1722.84 1421.20 35 E4a_E5a KnownJunction 1 249.75 351.85 356.37 291.77 999.49 1393.91 870.58 372.01 302.17 398.93 828.37 1133.77 1633.82 925.43 845.67 906.34 604.49 341.70 348.53 261.36 1214.60 1847.17 1077.45 36 E4a_E6a KnownJunction 0 3.04 19.54 46.04 17.11 33.28 94.89 138.14 35.41 22.48 18.43 41.22 80.13 42.21 49.33 79.61 63.83 46.47 24.58 25.51 8.76 41.64 122.53 50.45 37 I4_AR2 ActiveIntronRegion 0 34.31 12.20 2.45 5.45 24.36 14.67 59.23 1.73 4.94 5.73 11.29 49.90 14.07 14.70 5.80 35.35 5.91 0.00 12.57 8.51 11.02 21.05 24.58 38 ER5a ExonRegion 0 218.30 349.19 446.39 300.81 809.99 1170.23 695.08 401.50 328.72 423.37 831.15 1086.70 1369.49 858.46 791.63 841.54 588.97 412.58 303.52 261.70 1167.65 1641.22 1020.27 39 ER5b ExonRegion 0 401.94 603.41 436.52 308.80 480.58 794.80 506.03 434.65 364.04 449.88 1023.76 1169.76 942.81 1014.13 1127.78 998.43 624.94 412.65 363.43 272.44 1116.97 2407.34 1134.64 40 E5b_E6a KnownJunction 0 832.00 901.94 514.38 351.47 393.12 483.13 438.27 489.73 396.06 462.56 1161.98 1170.83 613.76 1290.84 1527.29 1108.60 704.35 349.00 456.77 243.65 1137.94 3244.64 1216.68 41 ER6a ExonRegion 0 1349.84 667.01 486.97 344.66 482.21 428.31 383.47 574.06 440.38 557.41 1261.77 1148.28 707.09 911.50 970.42 741.70 881.64 287.61 261.74 225.01 1027.05 2286.32 941.18 42 E6_Da KnownBoundary 0 1349.72 550.03 485.97 379.47 550.59 558.14 448.83 588.80 444.15 585.00 1071.96 1571.76 965.20 895.23 876.32 605.40 662.83 216.18 194.45 202.04 776.29 2155.42 839.72 43 ER6b ExonRegion 0 1083.17 441.34 630.29 482.27 984.06 787.40 652.49 717.48 512.72 643.07 978.89 1930.40 1271.17 881.44 1162.56 768.42 606.86 240.82 278.97 214.54 428.33 3026.23 941.85 44 E6_Db KnownBoundary 0 908.31 574.70 775.76 621.67 1868.25 1063.31 1126.63 816.76 564.17 717.70 931.13 2122.89 1292.61 783.39 1313.31 763.99 598.50 186.29 302.97 263.40 316.24 3832.60 980.91 45 ER6c ExonRegion 0 662.53 387.11 652.15 442.39 871.53 573.32 522.54 645.22 492.58 575.69 864.47 2042.41 1356.61 769.18 1199.30 676.00 533.09 186.93 275.75 212.53 307.43 2621.39 896.55 46 E6_Dc KnownBoundary 1 534.54 270.87 431.65 267.86 355.35 328.11 453.86 394.15 319.53 411.28 416.16 760.00 610.19 290.90 448.85 156.63 316.13 62.76 85.65 121.95 129.92 958.00 249.43 47 ER6d ExonRegion 0 366.90 99.41 111.49 75.02 188.96 223.48 206.41 103.10 78.14 88.16 98.87 337.99 258.04 141.00 224.71 134.69 70.35 44.20 56.93 34.45 37.72 444.95 199.74 48 E6_Dd KnownBoundary 0 26.97 2.50 13.99 1.80 7.22 9.82 1.81 3.33 0.00 5.05 0.00 22.36 0.00 0.00 4.45 0.00 3.83 0.00 0.00 0.00 0.00 17.02 3.33 49 E6_De KnownBoundary 0 6.59 2.50 11.97 3.00 0.00 0.00 0.00 0.00 3.10 2.82 2.58 0.00 0.00 0.00 0.00 0.00 4.77 0.00 4.24 2.88 0.00 5.63 4.35 50 ER6e ExonRegion 0 21.17 0.00 1.23 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER6f ExonRegion 0 1.11 0.00 0.40 0.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.74 0.00 0.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 0.00