Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LRRC8D Gene 0 82.29 54.12 56.55 48.06 85.90 47.13 42.37 47.04 50.16 67.83 128.42 116.91 238.35 159.31 118.10 124.11 169.67 74.07 69.83 38.96 26.32 58.17 27.43 2 337338 Transcript 0 0.22 1.92 2.27 0.00 2.03 11.79 1.31 4.64 2.09 10.54 7.51 3.29 4.46 7.14 4.89 15.38 15.94 38.10 6.06 7.85 0.00 0.01 0.00 3 394593 Transcript 0 1.73 1.10 3.40 2.22 2.99 0.45 3.28 0.90 2.21 4.90 3.89 4.35 7.45 6.53 7.23 5.15 9.10 1.10 5.33 3.08 0.00 0.92 0.70 4 441269 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 414841 Transcript 0 1.92 0.31 2.20 2.15 0.81 1.38 2.78 0.78 1.11 1.29 6.47 2.73 4.08 2.34 0.93 1.40 3.00 0.42 2.40 0.32 0.33 0.31 0.00 6 IG17_AR1 ActiveIntergenicRegion 0 12.95 4.99 18.62 8.86 20.81 4.19 11.18 5.75 3.52 6.96 5.20 10.19 6.72 18.38 18.52 13.47 11.79 7.06 17.67 5.58 0.00 0.31 0.00 7 IG17_SR2 SilentIntergenicRegion 0 3.21 0.36 5.16 1.62 1.92 3.05 2.92 0.50 1.11 0.31 3.24 5.02 1.36 15.97 10.22 5.29 8.08 8.65 3.49 2.85 0.00 0.73 0.00 8 ER1a ExonRegion 0 0.44 0.95 1.34 0.00 0.16 1.95 0.41 1.36 1.32 3.19 8.33 0.28 2.11 9.46 5.33 6.15 11.41 5.72 3.26 4.39 0.00 0.03 0.00 9 E1a_E4a KnownJunction 0 0.00 2.89 3.19 0.00 3.90 21.64 2.21 7.93 2.86 17.89 6.69 6.30 6.82 4.83 4.45 24.61 20.48 70.47 8.85 11.31 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.59 0.00 0.53 0.00 1.28 0.00 1.45 0.03 0.00 0.35 2.38 3.26 4.83 8.92 8.08 8.14 14.47 0.00 4.95 0.43 0.00 0.00 0.00 11 E2_Ab KnownBoundary 0 3.56 0.00 1.71 0.00 7.72 0.00 6.45 0.00 0.00 3.47 7.26 13.95 20.13 20.84 5.32 4.19 35.44 0.00 17.04 2.75 0.00 0.00 0.00 12 ER2b ExonRegion 0 0.38 1.04 2.18 3.47 3.00 0.70 3.59 0.65 1.88 2.54 9.03 1.86 17.54 20.12 9.82 13.52 41.03 2.80 6.23 0.95 0.04 0.02 0.00 13 E2a_E4a KnownJunction 0 0.00 0.00 0.00 1.80 0.00 5.00 0.00 0.00 0.00 0.00 0.00 0.00 33.44 26.02 15.70 18.63 21.04 0.00 4.61 0.00 0.00 0.00 0.00 14 I2_AR2 ActiveIntronRegion 0 0.00 0.00 0.00 1.36 2.01 0.00 6.73 2.59 3.50 0.00 1.61 9.02 25.01 10.96 0.00 2.72 27.78 2.46 16.46 4.26 0.00 0.00 0.00 15 I2_AR3 ActiveIntronRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 6.62 0.86 1.85 0.00 0.00 9.38 23.45 9.74 0.00 2.97 19.81 3.70 15.93 4.26 0.00 0.00 0.00 16 ER3a ExonRegion 0 3.83 0.61 4.41 4.29 1.61 2.77 5.55 1.55 2.22 2.58 2.40 5.46 8.16 4.68 1.85 2.80 6.00 0.83 4.81 0.64 0.67 0.63 0.00 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 I3_AR2 ActiveIntronRegion 0 6.93 0.00 0.50 0.00 0.00 0.00 1.44 0.00 0.73 0.69 8.35 0.00 0.00 5.64 3.44 7.49 3.72 2.51 0.00 0.41 10.25 1.47 5.59 19 E4_Aa NovelBoundary 0 2.82 5.85 6.39 1.63 0.00 0.00 0.00 1.93 0.00 2.58 55.22 0.00 8.28 12.48 0.00 19.40 17.48 7.13 0.00 8.31 30.52 2.45 22.37 20 ER4a ExonRegion 0 8.87 8.37 12.36 9.45 14.98 33.97 12.49 22.40 23.93 32.11 77.21 27.11 62.98 123.16 43.94 92.28 130.97 87.10 23.07 26.75 26.60 25.26 22.78 21 E4a_E5a KnownJunction 1 7.41 6.64 16.88 24.47 10.53 24.70 14.93 26.04 54.83 56.06 95.29 25.21 105.19 173.00 57.85 122.87 164.94 125.60 38.97 37.65 42.19 40.48 23.39 22 I4_AR1 ActiveIntronRegion 0 5.07 4.44 6.75 11.36 11.89 6.01 15.47 11.29 6.10 5.18 4.80 3.92 18.17 2.16 8.96 23.22 22.36 9.41 20.21 4.61 3.08 0.00 2.25 23 I4_AR2 ActiveIntronRegion 0 8.30 5.30 3.81 9.01 9.17 2.39 16.33 7.98 5.92 4.52 10.89 5.09 16.69 5.28 9.94 17.56 28.28 3.61 8.15 6.86 3.14 1.49 0.94 24 I4_SR5 SilentIntronRegion 0 53.82 11.06 7.88 10.96 19.31 3.45 13.86 12.77 7.70 9.76 2.32 12.30 27.33 2.19 7.97 7.73 11.75 2.81 7.54 3.61 1.26 0.38 1.43 25 I4_AR6 ActiveIntronRegion 0 38.37 7.12 13.00 11.85 23.45 5.16 19.05 16.18 7.21 11.50 1.56 10.16 21.36 1.11 8.74 10.13 11.55 2.17 8.10 5.03 0.26 0.56 1.49 26 I4_SR12 SilentIntronRegion 0 23.68 9.94 10.29 11.53 24.39 1.44 12.51 10.14 7.02 5.88 4.08 11.08 15.67 2.93 10.06 7.76 10.40 4.87 9.77 2.20 0.73 1.12 1.09 27 I4_SR13 SilentIntronRegion 0 11.15 9.86 11.19 8.86 18.89 3.73 14.69 10.91 8.71 6.76 7.37 12.01 23.53 5.60 7.75 6.24 12.59 4.29 11.97 3.06 0.00 0.89 0.84 28 I4_AR23 ActiveIntronRegion 0 15.42 8.51 10.03 7.88 28.13 6.05 12.54 11.39 8.39 6.34 6.33 4.48 14.88 5.97 6.28 6.83 10.27 2.57 9.98 2.30 0.72 0.68 0.64 29 E5_Aa NovelBoundary 0 3.56 9.74 13.39 5.63 22.41 12.15 23.89 6.57 10.42 0.00 9.63 6.30 13.64 5.12 4.45 8.20 4.77 6.14 4.24 2.49 0.00 0.00 0.00 30 ER5a ExonRegion 0 31.57 27.38 33.90 42.78 46.06 41.67 29.32 49.22 70.44 89.73 201.39 88.78 243.34 271.21 103.36 213.65 273.62 163.45 88.29 64.49 57.27 68.05 35.87 31 E5_Da KnownBoundary 1 46.23 35.39 37.91 37.36 50.00 66.55 57.72 32.33 41.93 78.62 164.30 136.54 299.49 224.73 46.23 113.90 302.20 80.13 45.27 56.69 33.24 47.09 43.11 32 ER5b ExonRegion 0 62.70 77.31 48.13 53.30 100.24 70.92 60.04 61.54 62.47 93.05 191.28 239.34 418.65 255.61 109.57 196.75 259.66 114.73 97.12 54.53 45.69 80.79 45.59 33 E5_Db KnownBoundary 0 90.91 103.47 65.31 83.04 127.50 56.10 83.34 75.21 74.83 104.47 190.31 140.30 312.48 223.03 141.29 191.40 264.89 89.79 98.73 62.64 60.79 125.34 63.94 34 ER5c ExonRegion 0 146.88 84.56 95.45 75.22 139.92 67.40 63.09 69.48 71.14 93.79 168.45 155.09 324.01 197.24 190.58 154.84 214.25 84.84 97.78 50.40 29.64 83.91 35.81 35 E5_Dc KnownBoundary 0 3.19 0.00 3.08 9.72 11.46 0.00 6.14 4.85 6.19 9.37 4.84 0.00 12.82 4.94 0.00 0.00 4.58 2.11 13.46 3.26 0.00 3.06 0.00 36 ER5d ExonRegion 0 2.88 2.21 6.26 4.44 4.71 0.89 5.12 1.78 4.42 9.44 5.41 5.43 10.06 4.14 6.37 2.16 3.73 2.20 5.70 5.74 0.00 1.84 1.40 37 IG18_SR1 SilentIntergenicRegion 0 0.00 3.73 2.03 3.99 4.63 1.63 7.21 2.07 2.39 3.74 0.00 4.98 15.48 0.21 5.04 2.57 5.98 1.06 5.70 0.00 0.00 0.00 3.16 38 IG18_AR2 ActiveIntergenicRegion 0 1.76 4.07 2.45 2.73 2.68 3.67 6.40 1.73 1.24 4.40 0.00 4.33 3.13 1.62 5.80 13.37 9.90 0.00 9.56 0.00 0.00 0.00 0.00