Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GBP2 Gene 0 104.69 1.70 11.78 17.15 41.40 19.26 13.01 31.58 44.87 7.57 1.26 68.77 40.09 80.26 92.72 165.25 100.72 0.16 0.00 0.26 21.77 28.92 12.67 2 464839 Transcript 0 10.27 0.08 1.09 1.56 4.83 1.36 1.15 4.48 6.95 0.76 0.05 9.08 2.14 3.28 3.94 8.13 4.37 0.00 0.00 0.00 0.70 4.29 0.71 3 370466 Transcript 1 50.34 1.73 1.39 2.68 27.44 17.29 12.43 8.26 7.26 0.35 2.26 10.30 6.40 67.01 32.54 102.55 66.52 0.00 0.00 0.00 24.07 19.42 12.67 4 463660 Transcript 0 4.54 0.09 0.41 0.54 2.26 1.13 1.55 1.61 2.64 0.19 0.16 7.94 6.19 2.71 2.32 9.25 4.99 0.00 0.00 0.18 0.40 4.40 2.07 5 493802 Transcript 0 5.91 0.00 0.41 0.00 1.88 0.43 1.55 0.60 0.43 0.00 0.00 3.34 4.26 1.56 0.56 3.48 3.86 0.00 0.00 0.00 0.52 1.46 1.37 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.08 0.02 0.00 0.00 0.00 0.00 0.02 0.00 11 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E4_Aa NovelBoundary 0 29.49 0.00 0.00 0.00 22.84 0.00 4.02 2.55 0.00 0.00 0.00 0.00 0.00 21.01 0.00 7.26 0.00 0.00 0.00 0.00 5.56 0.00 8.02 13 ER4a ExonRegion 0 93.97 3.45 2.77 4.35 50.23 34.25 24.86 14.87 12.26 0.35 4.52 2.53 9.73 130.42 60.54 199.02 133.03 0.00 0.00 0.00 48.15 35.22 24.32 14 E4_Ab KnownBoundary 0 274.42 16.25 7.98 9.69 142.61 107.67 55.73 36.88 30.27 1.24 12.53 62.87 67.04 242.51 117.31 469.53 329.87 0.00 0.00 0.00 116.57 62.40 62.23 15 ER4b ExonRegion 0 80.78 2.82 17.69 16.15 41.56 22.62 14.52 35.14 59.78 14.37 5.79 96.68 42.07 176.66 135.19 359.46 270.99 0.71 0.00 0.00 56.85 55.33 21.71 16 E4_Da NovelBoundary 1 0.00 0.00 0.00 3.26 7.05 0.00 0.00 4.31 7.52 1.42 0.00 0.00 6.17 9.36 0.00 69.47 12.62 0.00 0.00 0.00 5.93 3.12 11.01 17 E4a_E5a KnownJunction 1 27.19 9.74 32.82 38.42 21.14 2.67 4.42 48.80 102.78 20.44 0.00 79.53 112.17 356.06 354.78 1025.03 260.31 0.00 0.00 0.00 46.58 103.18 36.19 18 I4 Intron 0 14.87 0.49 1.66 4.49 8.99 5.89 4.01 6.40 11.65 1.29 0.18 21.87 11.22 13.48 2.68 21.69 13.80 0.00 0.19 0.00 1.60 6.31 2.93 19 I4_SR1 SilentIntronRegion 0 16.23 0.00 0.97 4.74 13.17 7.77 6.33 5.42 12.53 1.11 0.16 16.01 10.49 15.46 3.64 28.67 17.30 0.00 0.52 0.00 1.43 5.10 3.09 20 I4_AR1 ActiveIntronRegion 0 10.15 0.41 2.32 4.95 7.28 5.77 2.68 9.04 12.82 1.62 0.28 30.18 15.49 14.28 2.34 20.25 13.66 0.00 0.00 0.00 2.00 8.75 2.44 21 I4_SR2 SilentIntronRegion 0 21.67 1.64 1.69 3.36 5.39 3.00 2.73 3.09 8.12 1.03 0.00 16.65 4.45 8.93 1.58 12.86 8.38 0.00 0.00 0.00 1.21 3.91 3.94 22 E5_Aa NovelBoundary 0 290.57 0.00 1.80 15.32 24.19 22.60 17.93 10.06 27.08 3.57 2.47 27.01 0.00 54.04 28.56 76.05 26.93 0.00 0.00 0.00 5.68 2.69 8.54 23 I4_AR2 ActiveIntronRegion 0 24.13 0.00 0.05 0.60 0.00 0.00 0.00 1.31 4.45 0.41 0.00 7.79 0.38 2.01 2.90 4.16 1.58 0.00 0.00 0.00 0.00 0.92 0.00 24 ER5a ExonRegion 1 103.99 6.40 30.37 38.18 74.44 43.70 28.40 52.63 95.89 15.26 4.06 175.79 43.48 174.49 184.95 415.05 232.04 1.36 0.00 0.00 56.65 60.80 29.22 25 E5a_E6a KnownJunction 0 237.82 0.00 47.25 76.91 56.37 23.57 2.21 69.05 123.35 16.73 5.00 163.10 102.27 182.24 268.37 561.56 311.45 0.00 0.00 0.00 91.43 85.79 68.21 26 ER6a ExonRegion 0 181.38 0.95 35.59 43.27 53.66 32.64 12.03 69.12 114.90 22.79 2.79 142.97 84.79 239.06 239.40 535.40 337.26 0.00 0.00 0.85 72.05 69.72 33.54 27 E6a_E7a KnownJunction 0 256.12 11.77 26.82 28.77 61.21 47.64 27.12 72.21 106.39 13.73 2.11 79.98 91.23 260.70 199.77 466.72 501.07 0.00 0.00 0.00 102.43 56.70 19.80 28 ER7a ExonRegion 0 275.18 10.43 30.40 34.86 66.31 40.50 24.87 71.89 127.40 18.17 7.34 164.96 97.88 244.25 223.19 499.79 393.38 0.00 0.00 0.00 99.20 56.07 30.30 29 E7_Ab KnownBoundary 0 302.87 8.95 29.21 55.64 122.24 64.05 25.97 81.57 136.31 21.52 2.53 210.67 120.12 251.63 355.15 694.26 355.77 0.00 0.00 0.00 83.89 84.32 65.13 30 ER7b ExonRegion 0 241.23 4.17 37.60 52.42 101.09 65.88 24.38 81.53 120.29 22.38 1.79 165.26 123.66 243.93 293.45 603.63 312.30 0.00 0.00 0.00 58.32 80.49 38.32 31 E7_Da KnownBoundary 0 0.00 0.00 0.00 1.93 0.00 2.90 0.00 1.85 4.83 0.00 2.68 0.00 0.00 4.94 5.19 12.56 12.44 0.00 0.00 0.00 2.41 3.12 0.00 32 E7a_E7c KnownJunction 0 401.33 3.03 54.67 61.50 128.35 80.64 34.62 95.50 128.30 22.51 2.05 207.07 190.25 257.29 342.05 684.86 399.25 0.00 0.00 0.00 59.18 86.71 54.97 33 ER7c ExonRegion 0 4.54 0.09 0.41 0.54 2.26 1.13 1.55 1.61 2.64 0.19 0.16 7.94 6.19 2.71 2.32 9.25 4.99 0.00 0.00 0.18 0.40 4.40 2.07 34 E7_Ac KnownBoundary 0 10.15 0.00 1.27 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 5.55 20.13 0.00 5.19 3.16 4.77 0.00 0.00 0.00 0.00 3.12 0.00 35 ER7d ExonRegion 0 219.44 3.81 39.06 53.76 105.71 41.69 28.63 95.50 138.98 20.47 3.34 231.52 136.63 295.42 248.75 619.34 359.76 1.25 0.00 1.66 78.31 83.61 33.34 36 E7_Db NovelBoundary 0 20.15 0.00 1.57 1.27 11.80 0.00 0.00 2.22 5.50 1.67 0.00 24.31 20.13 7.06 4.45 33.50 13.18 0.00 0.00 0.00 0.00 7.84 4.01 37 E7b_E8a KnownJunction 0 247.08 6.58 32.55 44.55 144.74 56.67 44.30 75.86 125.98 23.85 2.11 169.26 181.48 309.20 227.95 580.02 278.17 2.07 0.00 0.00 76.42 83.89 26.55 38 E7b_E9a NovelJunction 0 3.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 0.00 6.49 2.24 5.56 20.34 7.95 0.00 0.00 0.00 0.00 0.00 0.00 39 I7 Intron 0 23.04 0.00 1.63 0.61 4.79 2.73 3.75 2.30 3.57 0.51 0.00 5.32 5.76 5.41 1.35 11.52 5.41 0.00 0.00 0.00 0.33 9.01 3.07 40 I7_SR1 SilentIntronRegion 0 20.48 0.00 1.58 0.73 5.07 0.49 5.75 3.07 2.86 0.46 0.00 3.81 6.70 5.16 1.87 11.78 4.41 0.00 0.00 0.00 0.00 9.42 1.91 41 I7_AR1 ActiveIntronRegion 0 26.63 0.00 1.72 0.46 4.49 5.65 1.24 1.36 4.53 0.58 0.00 7.32 4.63 5.79 0.70 11.35 6.78 0.00 0.00 0.00 0.75 8.60 4.59 42 ER8a ExonRegion 0 299.63 5.12 30.34 49.45 101.85 60.21 34.34 77.58 143.59 20.70 2.03 231.71 139.54 275.91 272.59 569.47 327.59 1.30 0.00 0.89 74.18 76.75 42.39 43 E8a_E9a KnownJunction 0 296.50 0.00 23.27 57.27 73.17 36.34 17.00 60.58 103.21 17.86 2.11 138.20 81.16 155.81 243.77 529.18 209.26 0.00 0.00 0.00 49.67 49.11 37.56 44 E9_Aa NovelBoundary 0 15.93 0.00 0.00 0.00 0.00 0.00 2.21 0.00 3.39 0.00 0.00 31.21 0.00 5.36 0.00 0.00 4.39 0.00 0.00 0.00 0.00 2.88 0.00 45 ER9a ExonRegion 0 290.72 3.17 28.07 33.79 97.90 55.71 29.93 71.50 104.99 16.39 1.86 101.63 76.63 221.95 265.01 440.83 255.32 0.00 0.00 0.77 68.13 49.57 33.25 46 E9_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 4.42 0.00 11.26 0.00 0.00 12.45 0.00 4.47 0.00 12.05 4.77 0.00 0.00 0.00 0.00 13.47 7.60 47 E9a_E11a KnownJunction 0 541.21 3.35 44.74 23.97 148.73 99.66 35.90 90.94 121.70 19.69 2.68 89.58 72.24 263.94 395.70 593.43 274.80 0.00 0.00 0.00 55.66 52.23 47.80 48 I9 Intron 0 8.47 0.27 2.16 1.33 4.04 1.69 2.95 3.72 4.71 0.00 0.25 13.43 8.11 5.52 1.84 7.41 4.11 0.00 0.00 0.00 0.72 9.44 2.31 49 I9_SR1 SilentIntronRegion 0 8.50 0.27 2.16 1.34 4.05 1.69 2.96 3.73 4.72 0.00 0.25 13.46 8.13 5.53 1.84 7.43 4.12 0.00 0.00 0.00 0.72 9.46 2.32 50 E10_Aa NovelBoundary 0 21.19 3.29 1.77 1.73 0.00 0.00 3.71 1.85 4.98 1.07 0.00 12.60 0.00 4.94 0.00 8.54 4.02 0.00 0.00 0.00 5.00 10.53 11.35 51 ER10a ExonRegion 0 11.83 0.00 0.82 0.00 3.76 0.86 3.10 1.21 0.86 0.00 0.00 6.67 8.52 3.13 1.12 6.95 7.72 0.00 0.00 0.00 1.03 2.92 2.75 52 E10_Da NovelBoundary 0 24.30 0.00 1.45 1.23 0.00 0.00 6.01 1.77 5.61 0.00 0.00 12.00 21.59 2.47 4.45 11.79 3.83 0.00 0.00 0.00 2.59 18.06 0.00 53 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E11_Aa NovelBoundary 0 53.71 0.00 5.00 0.00 11.80 0.00 3.49 1.52 4.72 0.00 0.00 18.61 0.00 19.42 4.45 11.45 4.77 0.00 0.00 2.68 0.00 6.18 7.94 55 ER11a ExonRegion 0 553.68 6.77 32.58 52.03 199.69 77.44 54.34 93.77 122.99 22.33 3.01 161.74 144.77 277.75 328.89 512.50 290.59 0.00 0.00 1.53 56.63 60.21 42.93 56 E11_Da NovelBoundary 0 16.60 0.00 1.27 3.16 7.22 0.00 3.80 1.77 10.79 2.42 0.00 6.00 12.66 11.01 9.89 22.64 15.24 0.00 0.00 0.00 0.00 8.21 14.85 57 E11a_E12a KnownJunction 0 485.94 5.92 45.39 61.93 185.40 84.16 31.22 96.77 111.05 28.63 7.32 221.62 152.75 268.29 352.80 472.78 203.55 0.00 0.00 0.00 49.79 47.95 34.66 58 E12_Aa NovelBoundary 0 52.16 0.00 3.99 1.30 20.54 2.16 2.25 0.00 6.37 0.00 0.00 19.81 6.17 6.71 4.45 4.36 8.23 0.00 0.00 0.00 0.00 13.66 0.00 59 ER12a ExonRegion 0 382.06 6.69 49.32 87.05 172.49 89.83 40.25 112.98 145.90 32.33 6.21 207.98 137.48 255.19 386.52 460.53 277.94 0.00 0.00 0.00 51.13 86.70 29.44 60 E12_Da NovelBoundary 0 405.85 5.66 55.82 101.49 106.11 87.22 54.89 103.75 145.63 38.57 6.69 220.57 94.80 212.37 293.22 356.23 240.58 0.00 0.00 0.00 47.20 92.28 49.08 61 E12b_E13a KnownJunction 0 563.43 6.38 75.81 112.07 165.53 85.29 45.71 168.20 173.93 41.07 2.58 218.17 185.86 375.19 494.96 569.00 343.62 0.00 0.00 0.00 50.72 85.11 58.73 62 ER12b ExonRegion 0 443.55 5.84 66.44 106.31 128.90 90.18 46.63 148.20 173.29 40.14 6.39 208.94 152.12 321.58 409.33 518.05 304.54 0.00 0.00 0.00 53.46 87.87 56.43 63 ER13a ExonRegion 0 457.91 6.45 48.56 85.16 198.10 68.61 59.49 134.40 150.23 30.53 4.48 240.55 159.41 239.06 415.82 466.49 296.37 0.00 0.00 0.00 61.41 87.01 34.06 64 E13a_E14a KnownJunction 0 617.44 9.01 35.92 68.02 136.08 35.66 36.17 112.67 129.08 17.35 0.00 248.48 132.13 238.21 482.23 357.00 292.01 0.00 0.00 0.00 70.49 63.44 41.23 65 ER14a ExonRegion 0 258.12 3.01 17.62 36.11 80.69 27.30 21.61 86.61 79.67 19.21 0.56 244.23 104.17 113.34 243.46 246.65 163.84 0.00 0.00 0.00 36.81 74.04 18.53 66 E14_Da KnownBoundary 0 375.18 0.00 16.68 51.87 86.59 10.45 48.49 100.14 61.52 17.41 0.00 151.85 93.34 74.22 161.57 160.39 123.98 0.00 0.00 0.00 15.32 29.70 17.33 67 ER14b ExonRegion 0 85.00 0.00 5.54 13.21 33.33 9.29 12.41 36.57 41.27 5.36 0.00 56.10 28.24 30.29 60.09 56.63 37.01 0.00 0.00 0.00 5.18 20.33 5.90 68 E14_Db NovelBoundary 0 39.86 0.00 0.00 1.47 15.45 2.73 1.63 4.31 15.10 1.67 0.00 54.92 7.47 21.01 17.80 49.22 8.60 0.00 0.00 0.00 0.00 9.00 0.00 69 E14b_E15a KnownJunction 0 25.93 0.00 1.83 3.53 12.56 0.00 0.00 10.23 18.87 1.48 0.00 31.06 0.00 6.77 8.90 24.10 8.32 0.00 0.00 0.00 2.59 5.57 0.00 70 E14_Dc NovelBoundary 0 50.53 0.00 3.67 0.00 4.24 0.00 4.15 15.16 16.23 0.00 0.00 42.91 13.64 2.47 13.35 21.28 22.16 0.00 0.00 0.00 0.00 3.06 4.18 71 ER14c ExonRegion 0 6.72 0.00 0.00 1.01 4.65 0.32 0.00 1.65 2.26 0.35 0.00 18.07 3.06 3.60 4.54 6.07 0.00 0.00 0.00 0.00 0.00 3.62 1.02 72 I14 Intron 0 37.67 0.67 0.50 3.88 13.73 6.91 5.93 8.16 19.50 1.96 0.21 28.56 13.18 16.32 15.23 26.78 18.39 0.00 0.00 0.12 3.85 14.45 5.77 73 I14_AR1 ActiveIntronRegion 0 37.75 0.67 0.50 3.89 13.76 6.92 5.94 8.17 19.54 1.96 0.21 28.62 13.21 16.35 15.26 26.83 18.43 0.00 0.00 0.12 3.86 14.48 5.79 74 E15_Aa NovelBoundary 1 45.64 0.00 5.91 9.09 28.44 10.73 8.17 15.36 38.40 1.56 0.00 24.01 12.34 19.25 28.93 104.93 12.06 0.00 0.00 0.00 2.72 45.74 14.85 75 ER15a ExonRegion 0 56.24 0.68 6.91 8.95 26.04 10.56 9.24 25.64 36.74 4.57 0.43 41.58 17.15 19.23 22.64 40.84 26.62 0.00 0.00 0.00 3.00 28.72 5.68 76 IG7 Intergenic 0 34.67 0.31 1.94 4.62 16.91 5.47 4.48 12.11 18.51 1.47 0.20 23.78 12.20 15.27 12.24 32.00 15.02 0.00 0.00 0.00 3.79 8.74 6.23 77 IG7_AR2 ActiveIntergenicRegion 0 34.15 0.20 1.27 4.25 16.52 6.58 4.75 14.88 22.00 1.70 0.39 27.27 16.10 20.25 11.02 39.67 22.69 0.00 0.00 0.00 3.51 11.62 7.90 78 IG7_SR1 SilentIntergenicRegion 0 32.26 0.00 1.97 6.62 17.65 4.59 5.08 11.27 18.60 1.36 0.00 19.68 9.18 6.68 12.33 17.19 7.18 0.00 0.00 0.00 3.52 7.36 4.16 79 IG7_AR1 ActiveIntergenicRegion 0 37.70 0.74 3.14 3.79 17.14 4.15 3.57 7.74 12.18 1.13 0.00 20.70 7.46 12.88 14.51 29.60 7.11 0.00 0.00 0.00 4.53 4.59 4.83