Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NEXN Gene 0 57.61 5.96 13.68 13.66 31.25 8.43 10.59 8.32 9.44 5.66 8.35 15.50 29.07 14.24 21.00 10.59 2.96 1.09 3.66 3.72 15.02 21.99 7.66 2 401035 Transcript 0 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 457030 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 330010 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 294624 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 334785 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 440324 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 342754 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 464998 Transcript 0 2.34 0.04 0.71 9.97 2.27 2.81 0.42 0.53 4.38 2.37 0.00 0.04 12.46 0.00 0.94 0.03 0.00 0.02 1.55 0.00 0.73 1.39 0.22 10 480732 Transcript 0 14.37 42.75 7.49 11.80 16.73 29.77 28.38 6.81 10.63 10.54 10.68 17.30 48.86 10.67 24.18 20.84 10.10 7.11 12.79 32.89 10.70 7.71 15.09 11 470735 Transcript 0 5.17 1.06 0.92 4.34 11.29 3.85 5.81 3.46 6.12 3.42 0.09 9.32 7.82 0.50 1.32 3.36 4.89 0.76 1.56 3.80 2.54 3.14 1.90 12 ER1a ExonRegion 0 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER1b ExonRegion 0 4.06 0.00 0.00 0.00 0.00 0.00 0.60 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.07 0.26 2.65 14 E1_Ac KnownBoundary 0 3.26 0.00 1.83 0.00 0.00 0.00 3.36 0.00 0.00 0.99 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.97 2.69 3.16 15 ER1c ExonRegion 0 12.33 0.00 2.16 1.60 1.42 2.32 5.22 0.76 1.24 1.45 0.00 0.00 0.00 0.00 0.00 0.00 3.11 0.00 0.00 0.00 20.22 5.02 2.50 16 E1_Ad KnownBoundary 0 28.15 0.00 3.37 4.83 11.38 5.05 12.50 1.85 5.90 3.89 0.00 0.00 12.66 0.00 0.00 0.00 4.77 0.00 4.71 0.00 27.86 5.76 8.45 17 ER1d ExonRegion 0 26.60 0.00 3.66 3.12 6.43 2.12 5.39 2.71 0.50 1.56 0.00 0.00 0.00 0.00 0.00 0.00 1.05 0.00 1.67 0.00 23.81 8.79 6.05 18 E1a_E2a KnownJunction 0 16.89 0.00 1.71 2.03 3.23 0.00 3.93 1.89 1.74 1.45 0.00 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 41.02 8.21 27.32 19 ER2a ExonRegion 0 33.30 1.44 10.27 8.16 18.29 2.02 1.88 5.89 4.41 3.01 2.52 0.00 2.49 0.00 0.00 0.00 1.63 0.40 1.21 0.00 43.63 16.72 16.69 20 E2a_E3a KnownJunction 0 23.12 0.00 3.19 0.00 8.40 0.00 0.00 2.55 2.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.66 0.00 2.97 5.63 0.00 21 E2a_E4a KnownJunction 0 49.05 0.00 10.41 14.95 4.33 5.05 7.51 8.54 6.16 4.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 19.58 8.27 14.68 22 ER3a ExonRegion 0 12.07 0.54 1.84 8.58 4.14 1.95 4.15 2.57 5.52 1.36 2.04 3.79 1.03 0.00 0.54 0.00 1.36 0.00 3.24 1.13 3.79 5.08 0.81 23 E3a_E4a KnownJunction 0 17.86 0.00 1.66 6.33 0.00 0.00 6.58 1.89 6.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 8.85 0.00 0.00 5.69 0.00 24 E4_Aa NovelBoundary 0 0.00 3.22 3.67 15.88 0.00 0.00 2.25 0.00 7.26 2.26 0.00 0.00 15.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER4a ExonRegion 0 37.99 4.56 9.46 11.99 21.20 7.20 6.75 6.48 7.43 4.37 0.00 0.00 0.18 0.00 0.66 0.00 0.96 1.50 3.63 0.00 17.69 29.78 14.68 26 E4a_E5a KnownJunction 0 54.75 5.46 12.68 17.98 27.76 8.52 12.94 4.60 10.68 4.67 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 8.85 0.00 23.85 20.08 7.34 27 ER5a ExonRegion 0 40.74 4.07 14.70 14.99 33.45 7.34 14.23 7.35 9.26 2.58 0.00 0.00 4.69 0.00 2.90 0.00 0.00 1.85 6.37 0.00 23.69 24.48 8.81 28 ER5b ExonRegion 0 100.94 1.14 20.98 27.76 41.78 15.20 13.95 7.47 12.15 4.18 0.93 0.00 4.40 0.47 1.30 2.09 2.32 1.82 4.85 1.50 17.86 41.83 13.97 29 E5a_E6a KnownJunction 0 114.17 3.09 6.15 13.02 15.62 2.90 9.89 2.51 4.14 0.00 2.63 0.00 6.33 0.00 0.00 0.00 0.00 0.00 4.52 0.00 12.36 37.72 4.35 30 E5a_E7a KnownJunction 0 38.30 0.00 7.27 5.79 3.82 2.21 0.00 0.00 3.44 3.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.35 3.33 31 E5a_E8a NovelJunction 0 11.11 0.00 0.00 0.00 0.00 0.00 0.00 1.77 1.79 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.09 5.76 0.00 32 E6_Aa NovelBoundary 0 11.04 0.00 2.96 20.91 12.99 5.28 14.84 0.00 4.66 4.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.84 3.12 0.00 33 ER6a ExonRegion 0 53.62 1.69 4.96 18.79 21.53 1.00 6.78 6.50 3.68 1.61 1.47 0.00 4.69 0.00 0.00 0.00 1.10 0.00 1.29 0.00 15.27 28.52 2.94 34 E6a_E7a KnownJunction 0 52.97 0.00 4.17 16.81 41.43 0.00 7.46 8.91 4.20 3.04 0.00 0.00 0.00 0.00 0.00 0.00 4.21 0.00 0.00 0.00 17.54 33.19 3.93 35 E7_Aa NovelBoundary 0 10.30 0.00 0.00 7.23 0.00 5.51 0.00 0.00 3.47 10.50 0.00 6.00 6.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.00 0.00 36 ER7a ExonRegion 0 112.92 5.42 16.90 27.00 48.16 24.89 13.36 10.81 12.01 10.22 1.24 4.77 8.48 0.44 1.45 0.00 1.86 0.00 1.04 1.12 16.57 43.25 8.25 37 E7_Ab KnownBoundary 0 105.35 6.64 16.11 31.20 56.96 20.84 7.51 13.18 16.90 10.10 0.00 5.55 20.29 0.00 0.00 0.00 0.00 0.00 0.00 3.26 23.10 53.40 3.59 38 ER7b ExonRegion 0 131.93 3.29 17.94 32.68 34.02 22.53 10.62 10.66 15.20 13.63 0.09 2.47 10.50 0.00 0.55 0.21 0.00 1.85 0.00 1.01 13.12 40.93 10.07 39 E7_Da KnownBoundary 0 3.78 0.00 1.83 3.36 0.00 0.00 0.00 0.00 2.84 6.55 0.00 0.00 0.00 0.00 4.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E7a_E7c KnownJunction 0 157.95 3.29 20.64 36.89 39.22 2.73 7.95 8.50 13.17 14.16 0.00 6.30 6.82 0.00 0.00 0.00 0.00 1.66 0.00 0.00 11.49 26.58 15.11 41 ER7c ExonRegion 0 2.34 0.04 0.71 9.97 2.27 2.81 0.42 0.53 4.38 2.37 0.00 0.04 12.46 0.00 0.94 0.03 0.00 0.02 1.55 0.00 0.73 1.39 0.22 42 E7_Ac KnownBoundary 0 3.78 0.00 0.00 15.75 4.33 0.00 2.25 2.26 5.96 1.67 0.00 0.00 15.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 43 ER7d ExonRegion 0 149.80 3.59 25.48 33.07 63.11 13.11 18.88 12.85 23.10 10.47 13.28 6.08 11.75 26.97 21.94 26.48 0.00 0.28 2.28 1.91 50.20 34.44 16.62 44 E7_Db NovelBoundary 0 90.02 0.00 14.37 18.58 24.96 12.61 11.39 10.64 14.99 5.59 27.16 5.40 8.28 10.42 8.90 43.92 0.00 0.00 0.00 0.00 36.76 9.06 10.76 45 E7b_E8a KnownJunction 0 314.28 5.79 25.69 34.09 140.83 30.27 34.67 27.52 28.07 10.05 50.38 6.30 18.34 32.08 41.29 98.44 0.00 2.07 4.80 0.00 61.53 32.88 32.78 46 ER8a ExonRegion 0 120.28 4.34 21.32 18.65 59.86 12.55 15.00 19.77 22.65 6.78 20.26 10.97 30.42 38.09 43.12 39.31 0.96 0.31 3.03 1.97 34.29 36.18 16.69 47 E8a_E10b KnownJunction 0 136.47 5.85 25.19 19.84 37.10 21.07 18.37 26.45 15.83 6.07 17.27 23.11 26.95 38.85 78.74 98.78 0.00 0.00 0.00 3.26 21.19 41.46 3.84 48 ER9a ExonRegion 0 9.52 7.42 1.42 3.69 7.20 2.36 4.51 0.33 1.19 0.23 0.56 8.35 14.77 5.22 9.07 2.88 1.92 2.74 5.52 4.52 2.26 2.83 2.35 49 E9_Da NovelBoundary 0 2374.57 1761.27 1317.75 1444.74 1647.71 1017.14 1845.96 1501.67 1410.75 1259.83 619.68 285.99 323.03 220.38 550.10 1550.28 1233.66 1540.16 1392.98 1408.67 794.09 579.51 1436.41 50 E9a_E10a KnownJunction 0 14.30 105.18 17.56 29.53 18.42 82.40 67.35 14.83 29.43 26.84 27.32 26.41 87.01 7.59 25.47 39.82 17.30 12.39 17.04 72.23 18.29 14.70 28.85 51 E10_Aa NovelBoundary 1 6773.05 4491.31 5465.57 5345.14 4174.20 2798.67 4553.22 5963.87 5582.38 4797.41 2204.19 614.45 667.33 637.06 1535.95 4668.01 3909.30 6573.39 3153.31 3900.67 2483.39 1786.92 4159.49 52 ER10a ExonRegion 1 19.29 15.64 3.48 2.19 24.57 4.55 13.27 5.28 1.27 4.56 4.17 17.13 44.79 19.20 38.00 19.81 11.09 6.20 15.82 21.93 11.54 5.61 14.07 53 E10_Ab KnownBoundary 0 9.11 3.35 7.10 12.32 8.66 0.00 2.16 6.20 0.00 1.48 0.00 0.00 39.45 0.00 0.00 12.48 0.00 0.00 9.41 0.00 0.00 5.45 3.84 54 ER10b ExonRegion 1 139.79 4.90 29.69 25.33 74.55 14.04 21.87 16.91 16.55 8.43 24.88 15.96 74.58 21.07 31.86 25.41 2.75 0.00 1.12 0.88 13.27 40.10 11.98 55 E10_Da KnownBoundary 1 220.26 0.00 29.69 16.28 91.77 13.80 31.89 10.64 21.70 11.95 17.90 75.17 70.94 23.84 61.69 4.10 4.11 0.00 0.00 3.07 23.97 40.23 15.28 56 ER10c ExonRegion 0 167.54 3.25 30.65 20.64 43.07 18.05 10.94 9.75 20.33 6.12 29.62 45.25 79.04 31.54 57.84 10.89 3.96 0.00 1.71 1.86 13.76 30.79 6.03 57 E10_Db NovelBoundary 0 3.70 0.00 0.00 12.72 12.22 8.52 0.00 1.85 5.96 3.33 0.00 0.00 19.80 0.00 0.00 4.36 0.00 0.00 0.00 0.00 3.15 3.12 4.35 58 E10b_E11a KnownJunction 0 172.18 0.00 27.32 17.05 27.59 13.17 8.39 8.46 14.38 1.53 16.85 44.71 60.87 21.19 25.59 15.64 0.00 0.00 0.00 0.00 25.88 28.90 11.95 59 E11_Aa NovelBoundary 0 0.00 0.00 2.66 10.32 0.00 0.00 2.25 0.00 1.50 0.00 0.00 0.00 19.80 0.00 0.00 4.27 0.00 0.00 0.00 5.56 0.00 0.00 0.00 60 ER11a ExonRegion 0 71.79 1.95 26.21 13.84 40.22 8.43 16.16 7.56 13.78 5.46 20.13 34.68 54.39 22.10 30.18 7.51 1.74 2.02 0.00 2.79 14.24 31.85 10.81 61 E11_Da KnownBoundary 1 100.24 2.70 30.19 20.74 57.72 13.29 30.30 13.88 20.02 4.38 18.85 144.50 88.63 43.09 55.38 8.29 0.00 2.16 0.00 3.26 2.72 42.56 16.05 62 ER11b ExonRegion 1 145.62 7.06 33.09 27.55 77.70 8.49 23.96 16.23 16.08 4.95 16.56 76.06 92.88 33.47 61.50 8.62 0.00 0.76 0.62 1.29 13.78 32.68 8.58 63 E11_Db KnownBoundary 0 245.60 3.29 33.74 30.17 118.17 4.94 32.15 14.09 9.84 4.38 16.43 56.42 113.95 21.07 56.12 10.77 0.00 0.00 3.86 0.00 17.24 33.13 8.54 64 ER11c ExonRegion 0 88.46 7.17 29.34 17.99 45.20 3.96 12.43 13.59 11.97 3.89 24.03 29.49 76.88 25.90 27.72 11.05 0.00 1.20 1.76 2.79 19.65 28.86 6.11 65 E11_Dc NovelBoundary 0 14.08 0.00 0.00 10.69 0.00 7.33 2.25 0.00 1.53 0.00 0.00 5.70 20.45 0.00 13.35 0.00 0.00 0.00 0.00 2.62 3.15 5.82 0.00 66 E11c_E12b KnownJunction 0 34.67 22.50 30.01 11.85 32.60 2.90 3.62 16.88 9.66 6.21 27.38 5.85 34.90 16.25 14.96 15.72 0.00 0.00 0.00 0.00 8.34 20.02 0.00 67 ER12a ExonRegion 0 5.17 1.06 0.92 4.34 11.29 3.85 5.81 3.46 6.12 3.42 0.09 9.32 7.82 0.50 1.32 3.36 4.89 0.76 1.56 3.80 2.54 3.14 1.90 68 E12_Ab KnownBoundary 0 3.78 0.00 1.30 3.63 3.82 5.28 6.76 6.37 2.89 2.71 0.00 0.00 0.00 0.00 0.00 7.69 0.00 0.00 0.00 9.20 0.00 0.00 0.00 69 ER12b ExonRegion 0 92.17 5.77 24.99 21.03 60.66 16.34 14.76 21.21 18.94 6.58 33.14 31.31 80.54 36.93 43.27 29.35 2.28 1.08 5.63 3.58 39.46 26.58 12.29 70 E12_Da NovelBoundary 0 0.00 0.00 1.77 11.69 0.00 0.00 5.87 0.00 3.36 1.67 2.68 12.15 22.89 0.00 0.00 3.93 4.77 0.00 6.96 0.00 0.00 0.00 3.67 71 E12a_E13a KnownJunction 0 156.18 8.68 9.11 8.69 21.65 2.90 7.68 15.81 19.88 8.78 19.53 45.01 96.58 38.85 58.10 33.24 4.77 2.53 8.47 0.00 16.62 28.04 20.23 72 E13_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 12.19 2.01 1.13 0.00 0.00 0.00 20.45 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 4.35 73 ER13a ExonRegion 0 71.32 9.13 17.29 14.21 49.41 13.09 14.35 13.60 14.59 11.03 17.09 35.08 58.23 29.01 55.57 24.04 7.10 1.58 5.32 3.37 31.93 32.97 10.04 74 E13_Da KnownBoundary 0 84.39 6.12 25.25 16.35 56.79 13.74 18.68 12.73 11.66 13.70 4.84 31.36 60.39 21.31 28.43 7.43 0.00 4.44 0.00 6.46 2.84 42.25 19.72 75 ER13b ExonRegion 0 42.53 3.22 19.17 16.38 43.02 10.13 17.97 15.13 15.87 11.05 9.16 29.31 52.82 23.26 40.17 16.00 2.74 2.10 5.05 4.75 2.75 54.97 11.29 76 E13_Db KnownBoundary 0 41.79 8.49 13.99 20.18 48.81 14.82 6.27 22.22 14.21 13.14 10.74 37.66 48.86 11.71 34.74 14.70 9.26 0.00 9.32 6.52 0.00 61.23 7.60 77 E13b_E13b KnownJunction 0 0.00 0.00 1.42 0.00 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78 ER13c ExonRegion 0 29.81 6.70 13.37 15.64 35.05 8.74 13.97 14.86 6.37 12.76 10.77 37.12 36.15 18.92 20.10 8.59 3.30 0.61 2.37 3.35 10.67 32.17 9.35 79 E13_Ab KnownBoundary 0 39.93 0.00 12.06 17.85 41.94 2.78 8.21 9.16 6.86 7.31 15.95 31.21 55.03 15.95 24.35 3.76 4.68 2.11 0.00 3.26 16.19 28.66 17.07 80 ER13d ExonRegion 0 38.10 0.00 11.88 18.14 38.28 1.83 10.90 11.70 7.22 6.88 9.96 24.31 60.25 29.11 18.97 8.69 3.30 1.85 6.37 2.13 19.32 29.97 11.75 81 ER13e ExonRegion 0 63.98 14.41 19.65 20.57 34.04 6.66 13.60 12.38 11.28 9.55 6.37 19.85 35.67 23.62 19.61 11.12 3.00 0.89 5.70 4.07 16.74 31.81 5.28 82 E13_Dd KnownBoundary 0 98.02 20.33 16.17 17.95 27.33 0.00 4.50 4.19 5.01 7.31 2.68 31.36 13.47 10.30 42.90 6.92 0.00 0.00 4.05 3.26 3.03 25.17 0.00 83 E13_De KnownBoundary 0 135.95 18.75 10.11 13.35 25.81 5.79 10.69 4.60 3.59 4.16 2.68 11.55 42.69 4.18 19.16 0.00 0.00 0.00 0.00 0.00 0.00 29.15 8.11 84 ER13f ExonRegion 1 115.82 19.03 18.14 20.12 30.72 3.30 8.16 6.08 6.37 7.48 3.56 24.42 36.77 9.68 30.87 2.50 0.00 0.00 1.53 2.13 1.59 30.09 4.11 85 ER13g ExonRegion 0 43.16 7.88 16.22 10.75 26.88 8.71 9.70 5.91 6.51 5.79 6.15 16.21 25.36 11.48 23.21 6.81 3.03 0.00 1.95 4.07 4.04 21.93 5.01 86 ER13h ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00