Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	LMO4	Gene	0	95.39	19.50	73.20	22.91	121.75	221.82	63.24	59.32	25.53	68.17	217.11	110.80	67.17	225.00	125.39	184.98	61.88	59.79	129.66	16.24	136.56	518.96	380.65
2	370544	Transcript	0	45.75	18.81	28.03	6.77	44.96	129.74	35.23	34.46	9.71	46.14	143.97	36.37	27.91	169.24	76.01	116.96	43.18	47.32	97.36	6.20	124.35	281.31	269.68
3	495705	Transcript	0	0.02	0.00	1.39	0.38	0.55	0.03	0.59	1.02	1.07	0.02	18.38	4.96	2.52	14.60	5.74	12.17	5.32	0.01	0.58	0.43	2.67	7.06	15.65
4	370542	Transcript	1	17.17	0.40	1.83	2.16	4.04	27.22	3.44	3.19	3.92	1.15	63.66	2.01	2.47	50.75	22.75	33.66	12.66	10.27	4.47	0.00	29.41	31.22	59.27
5	489303	Transcript	0	10.42	0.65	2.49	0.10	2.23	8.05	1.82	3.72	1.11	2.96	34.90	4.11	5.28	52.21	18.12	35.58	16.37	4.01	10.26	0.61	14.05	37.62	67.37
6	ER1a	ExonRegion	1	3.89	1.07	11.62	1.65	5.67	28.55	4.96	10.77	5.30	28.71	93.56	12.79	8.60	101.16	39.93	81.39	34.13	21.28	89.91	4.03	87.63	185.67	246.17
7	E1_Ab	KnownBoundary	1	29.78	9.54	31.31	4.69	30.56	114.82	41.34	40.01	16.35	45.75	160.36	58.07	32.47	386.60	167.50	489.36	58.44	100.15	379.49	9.46	198.74	882.62	1350.27
8	ER1b	ExonRegion	0	31.32	11.40	32.26	6.80	25.10	156.37	32.98	34.35	10.39	52.93	141.58	46.07	42.27	275.08	130.96	195.57	52.70	74.55	129.92	8.04	175.52	315.65	476.49
9	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.63	0.00	0.00	0.00	4.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E1a_E3c	KnownJunction	1	72.16	42.89	57.21	11.95	58.74	260.65	64.52	71.72	16.46	92.03	304.39	36.61	47.07	379.36	165.77	236.18	86.86	110.97	158.31	8.56	266.82	431.88	485.89
11	I1	Intron	0	12.16	0.67	1.31	1.12	9.53	8.25	5.78	6.05	4.17	1.75	60.36	32.97	17.68	79.37	21.53	46.04	28.44	2.16	5.19	0.94	10.28	64.15	64.39
12	I1_SR1	SilentIntronRegion	0	5.88	0.56	0.63	0.76	5.39	4.44	4.20	2.34	2.96	1.06	36.88	16.88	7.00	64.17	17.83	38.58	23.84	1.56	5.28	0.66	14.94	45.48	54.26
13	I1_AR1	ActiveIntronRegion	1	10.71	0.67	0.37	0.98	6.62	9.28	9.04	4.71	3.78	1.48	61.44	26.10	17.65	75.11	17.41	32.48	25.17	0.69	3.62	0.57	5.78	58.37	44.74
14	I1_SR2	SilentIntronRegion	1	17.51	0.82	2.01	1.29	13.29	10.73	5.94	9.32	5.05	2.47	76.28	46.58	24.58	96.28	25.41	54.34	34.60	2.82	5.90	1.35	9.65	76.73	73.12
15	I1_AR2	ActiveIntronRegion	0	4.54	0.00	1.86	2.14	8.60	4.62	3.09	2.05	4.45	0.00	48.46	24.30	16.75	28.77	21.14	57.47	10.21	4.28	3.28	0.00	3.80	76.62	106.68
16	E2_Aa	NovelBoundary	0	0.00	0.00	8.25	3.33	18.34	0.00	6.18	4.52	11.08	0.00	78.55	38.26	6.82	53.74	32.88	47.68	42.36	1.74	0.00	0.00	15.01	65.58	85.53
17	ER2a	ExonRegion	0	0.05	0.00	4.16	1.13	1.64	0.09	0.14	3.06	3.21	0.06	50.81	14.87	7.57	43.79	17.23	36.52	15.95	0.04	1.73	1.28	8.02	21.19	43.20
18	E2_Da	NovelBoundary	0	0.00	0.00	2.99	7.16	7.13	2.67	4.50	5.79	12.38	0.00	74.49	41.86	26.62	83.70	41.91	53.66	52.55	14.09	3.76	2.88	10.44	81.32	94.58
19	E2a_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.76
20	I2	Intron	0	3.22	0.00	2.78	0.39	5.09	1.05	3.02	0.98	2.80	0.00	38.62	15.65	7.40	51.98	16.76	32.24	15.08	0.52	3.64	1.62	12.15	34.49	59.80
21	I2_SR1	SilentIntronRegion	1	1.77	0.00	3.29	0.00	1.61	1.10	3.82	0.00	3.10	0.00	58.10	25.31	9.77	56.35	27.48	58.18	15.18	0.98	4.16	1.23	14.41	69.52	118.02
22	I2_AR1	ActiveIntronRegion	1	4.54	0.00	2.97	0.66	7.82	1.19	3.09	1.67	3.11	0.00	34.46	13.02	7.35	58.20	13.73	23.53	17.51	0.36	3.96	2.10	12.94	21.23	38.18
23	ER3a	ExonRegion	1	18.79	0.80	2.45	0.19	4.60	24.79	4.84	1.94	1.30	2.29	70.99	4.03	4.94	56.53	32.14	41.61	14.10	8.93	5.09	0.00	30.47	38.69	64.94
24	E3_Ab	KnownBoundary	1	90.46	0.00	0.00	2.53	14.77	95.74	3.93	6.24	2.84	0.00	193.52	12.45	0.00	124.96	107.30	191.40	49.84	24.13	34.92	0.00	103.54	115.43	203.51
25	ER3b	ExonRegion	1	42.52	0.37	3.04	2.73	8.11	55.40	2.29	5.45	4.57	3.16	135.24	3.02	0.99	101.88	50.38	112.13	36.71	16.74	16.51	0.00	72.99	83.21	134.28
26	E3_Da	KnownBoundary	0	10.30	0.00	3.55	0.00	0.00	0.00	0.00	0.00	1.79	7.76	32.75	0.00	6.17	45.38	4.45	35.63	22.53	1.82	0.00	0.00	11.49	39.19	43.19
27	E3a_E3c	KnownJunction	0	15.56	0.00	1.21	4.13	3.48	29.64	2.03	4.44	6.54	0.00	56.33	0.00	0.00	44.97	13.35	25.72	11.22	11.61	3.86	0.00	28.36	23.76	53.61
28	ER3c	ExonRegion	0	10.42	0.65	2.49	0.10	2.23	8.05	1.82	3.72	1.11	2.96	34.90	4.11	5.28	52.21	18.12	35.58	16.37	4.01	10.26	0.61	14.05	37.62	67.37
29	E3_Ac	KnownBoundary	0	25.86	2.70	3.28	0.00	3.14	45.88	3.62	3.53	0.00	1.02	24.16	0.00	6.82	56.45	8.90	47.34	12.53	4.02	4.33	0.00	11.12	36.37	75.29
30	ER3d	ExonRegion	1	119.75	29.26	128.33	32.37	77.93	312.46	63.47	91.76	40.57	129.29	423.00	64.25	78.11	553.48	248.37	362.82	116.79	159.22	173.78	27.36	393.15	665.80	711.95
31	E3b_E4a	KnownJunction	1	350.28	64.99	255.20	64.56	201.27	558.14	127.50	144.05	70.66	219.52	744.08	176.91	82.46	882.81	417.21	746.73	232.44	329.84	409.24	31.51	602.58	1231.10	1402.94
32	I3	Intron	0	8.79	0.71	3.01	1.58	5.24	7.76	3.75	3.17	2.08	2.50	21.40	19.91	15.08	13.31	6.75	13.53	6.94	2.48	8.26	1.32	8.89	23.32	24.07
33	I3_SR2	SilentIntronRegion	0	7.37	0.00	2.03	1.54	5.88	8.14	4.22	2.06	0.81	0.69	17.99	15.70	16.06	8.09	3.22	6.19	4.14	0.50	8.24	1.00	4.22	24.35	21.30
34	I3_AR2	ActiveIntronRegion	0	12.05	0.58	5.80	1.78	4.88	4.82	3.98	3.12	1.92	2.30	20.85	26.10	15.31	10.60	6.00	7.50	6.73	3.53	5.83	0.68	5.29	21.78	21.09
35	I3_AR3	ActiveIntronRegion	1	0.00	0.00	6.13	4.28	0.00	3.67	11.73	2.22	2.12	1.15	12.43	17.32	15.41	14.15	7.05	44.58	0.00	2.38	19.11	2.13	23.93	31.25	29.37
36	I3_SR6	SilentIntronRegion	0	9.06	0.35	1.84	1.05	4.84	7.49	4.48	2.84	1.94	2.33	28.51	38.27	22.69	18.55	8.26	16.07	10.27	2.70	7.81	1.69	10.71	28.70	28.48
37	I3_AR6	ActiveIntronRegion	0	8.11	0.36	4.19	2.73	6.15	13.08	5.04	4.64	4.22	2.88	32.56	36.71	31.36	20.47	7.65	22.04	11.36	5.45	9.91	2.80	13.71	37.49	43.86
38	I3_SR7	SilentIntronRegion	0	11.22	1.07	1.28	0.93	7.39	14.95	2.72	6.31	2.88	4.43	43.40	39.72	23.26	17.82	11.93	18.57	5.55	3.96	9.26	2.24	13.54	36.02	47.89
39	I3_AR7	ActiveIntronRegion	0	11.47	0.00	2.81	0.00	8.32	15.86	4.88	3.24	2.59	4.55	40.97	38.75	21.61	17.44	9.90	13.32	11.52	1.16	4.81	2.73	10.72	22.10	31.78
40	I3_AR8	ActiveIntronRegion	0	10.12	0.97	3.07	0.00	8.24	11.50	3.66	2.31	4.00	4.75	41.93	24.31	21.69	16.84	9.78	14.01	13.81	1.63	6.86	2.76	5.25	30.89	29.05
41	I3_AR9	ActiveIntronRegion	0	15.60	2.00	3.27	2.95	7.02	10.06	4.14	3.74	3.15	3.12	27.16	22.76	13.80	16.04	9.13	15.52	9.80	2.72	9.93	2.99	11.88	28.05	22.84
42	I3_AR10	ActiveIntronRegion	0	10.22	0.92	1.35	3.21	10.01	8.34	5.62	6.49	4.30	6.38	20.57	30.47	37.02	14.32	10.82	16.35	5.42	0.50	13.42	0.64	6.00	42.45	22.92
43	ER4a	ExonRegion	1	243.70	52.10	249.61	66.85	157.57	550.82	145.02	166.20	90.35	216.01	762.06	171.57	136.25	819.71	440.54	633.37	232.56	251.67	315.68	48.67	606.50	1195.90	1211.71
44	E4a_E5a	KnownJunction	0	300.35	73.01	279.68	102.08	319.44	857.80	240.55	207.96	98.61	237.38	910.76	316.75	218.49	952.33	416.47	754.25	270.03	259.66	390.60	77.47	609.99	1295.27	1373.66
45	ER5a	ExonRegion	0	208.56	65.49	327.20	89.50	422.27	906.63	196.21	219.26	116.85	247.80	905.39	304.12	225.72	928.88	463.07	894.57	288.55	296.47	543.41	61.61	626.59	1655.52	1736.99
46	E5a_E6a	KnownJunction	0	234.78	49.27	370.00	113.01	345.67	507.26	110.80	282.43	116.03	257.69	1092.86	416.09	222.06	933.26	490.64	744.85	352.87	296.47	447.35	85.90	723.23	1291.48	1607.73
47	I5	Intron	0	11.71	1.42	3.93	2.50	13.16	17.47	8.42	4.67	2.10	4.51	19.67	17.16	15.32	9.55	3.09	12.30	6.22	2.76	5.59	1.48	4.33	26.17	17.62
48	I5_AR2	ActiveIntronRegion	0	2.14	0.01	1.77	2.08	6.60	13.39	7.24	3.27	2.33	4.86	9.02	18.98	21.16	7.31	2.76	8.52	5.04	1.00	3.85	2.69	0.00	26.34	14.07
49	I5_AR3	ActiveIntronRegion	0	8.47	2.03	2.45	4.67	5.35	17.81	2.46	3.46	2.65	5.73	16.29	50.10	18.76	6.50	2.90	20.80	9.90	1.06	6.37	2.13	0.00	53.58	13.01
50	I5_AR4	ActiveIntronRegion	0	4.28	0.52	1.86	2.05	9.52	10.87	6.25	3.44	1.65	4.00	18.94	24.96	17.87	8.66	1.69	8.61	5.71	1.75	4.42	1.10	3.11	24.33	14.85
51	I5_SR1	SilentIntronRegion	0	8.01	1.03	1.53	1.47	11.37	18.04	12.16	5.46	1.24	1.88	24.12	16.19	21.78	12.73	3.66	13.16	7.31	1.33	5.55	2.06	7.92	28.96	17.98
52	I5_AR6	ActiveIntronRegion	0	28.90	2.86	9.47	4.87	23.59	26.27	12.20	6.66	2.35	6.86	20.26	13.71	17.96	10.04	4.62	13.50	6.26	4.33	6.75	0.52	4.66	27.33	21.63
53	E6_Aa	NovelBoundary	0	41.49	3.29	12.71	5.29	43.38	15.62	15.02	18.77	3.36	7.49	27.85	42.31	34.09	20.19	0.00	28.88	4.02	11.81	27.86	2.94	23.72	33.92	24.07
54	ER6a	ExonRegion	0	352.42	50.56	309.41	92.01	324.63	678.03	170.31	215.75	99.49	239.05	892.29	416.67	247.63	918.13	400.49	767.26	237.40	285.43	530.75	52.02	541.50	1440.18	1538.13
55	E6_Da	KnownBoundary	0	869.27	108.20	258.27	87.33	965.54	1365.75	338.55	183.27	88.51	212.56	586.89	496.51	340.56	956.27	351.94	690.33	153.25	164.20	512.39	57.40	435.10	1392.20	1379.89
56	ER6b	ExonRegion	0	258.32	53.00	199.61	74.32	475.72	636.24	216.05	173.45	63.72	183.33	486.95	386.25	215.65	417.58	370.36	319.47	121.77	59.32	227.48	46.73	134.71	1676.49	599.37
57	E6_Db	KnownBoundary	0	3.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.82	0.00
58	ER6c	ExonRegion	1	61.19	12.47	15.25	6.71	70.45	100.03	36.22	20.89	7.36	17.67	33.97	59.71	28.07	27.18	22.33	33.31	8.53	9.70	43.86	6.01	18.60	226.38	76.97
59	IG45_AR1	ActiveIntergenicRegion	0	11.32	4.30	7.45	2.72	20.04	40.70	8.16	8.43	3.01	10.62	6.89	13.37	7.56	4.86	3.36	4.20	1.98	7.57	14.31	3.95	6.44	56.52	20.45
60	IG45_SR1	SilentIntergenicRegion	0	30.34	8.64	15.62	10.90	56.41	105.14	26.48	8.21	1.24	25.90	2.58	7.22	26.58	4.33	5.80	11.64	3.30	8.62	29.73	6.38	4.41	110.77	17.38
61	IG45_AR2	ActiveIntergenicRegion	0	8.47	5.51	6.17	3.67	17.52	24.34	7.07	5.83	3.51	11.80	5.64	7.74	5.57	5.95	8.05	8.05	0.74	7.04	14.03	4.74	12.70	31.03	21.09