Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GIPC2 Gene 0 8.48 0.36 1.03 2.06 5.63 1.32 1.63 1.95 3.43 0.31 0.07 0.00 0.00 0.11 0.19 0.42 0.13 0.12 0.08 0.05 0.25 0.37 0.19 2 476882 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.03 0.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 370759 Transcript 0 12.11 0.37 1.41 3.16 6.11 1.35 1.39 2.67 4.55 0.67 0.09 0.00 0.00 0.01 0.33 1.24 0.08 0.25 0.09 0.44 0.30 0.64 0.98 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 14.95 12.76 10.03 15.54 10.50 5.40 15.32 7.07 8.66 12.41 3.41 10.44 9.25 16.14 15.37 20.40 23.31 12.80 6.87 16.69 5.19 2.86 14.98 7 Ix_SR1 SilentIntronRegion 0 6.55 10.38 8.66 17.54 9.35 6.43 12.38 7.18 10.87 12.82 5.50 12.99 2.59 21.42 19.39 21.89 30.45 17.17 8.66 17.52 8.84 5.32 20.31 8 Ix_AR2 ActiveIntronRegion 0 7.06 14.24 9.80 11.81 12.49 3.06 5.30 12.10 10.70 14.91 3.87 12.99 4.69 25.44 11.61 25.26 38.51 18.48 9.56 19.86 5.14 7.29 4.89 9 Ix_SR2 SilentIntronRegion 0 22.81 15.46 12.49 16.45 12.84 4.17 18.72 8.26 8.77 13.53 2.36 10.17 15.28 15.51 15.58 22.23 23.11 11.93 6.87 18.65 3.71 1.77 14.98 10 Ix Intron 0 8.87 13.18 14.82 13.56 13.49 8.28 29.04 13.15 10.84 15.78 5.06 29.14 29.48 16.08 11.14 15.96 13.84 10.43 10.84 17.69 4.47 3.14 5.96 11 Ix_SR1 SilentIntronRegion 0 5.85 10.32 14.84 11.84 9.20 6.43 22.09 9.46 9.39 15.19 5.54 27.59 32.09 13.29 13.69 13.16 15.50 11.04 10.21 17.75 1.83 1.21 6.10 12 Ix_AR1 ActiveIntronRegion 0 10.23 15.83 16.31 16.66 15.96 8.63 30.14 16.40 12.96 17.69 5.48 33.05 26.77 18.93 8.42 16.71 11.83 10.47 9.68 19.19 6.59 5.07 6.01 13 Ix_SR2 SilentIntronRegion 0 17.38 16.29 9.33 10.03 23.62 15.25 55.91 17.83 9.65 11.48 1.42 21.95 27.65 18.22 9.61 25.64 13.70 7.61 17.89 12.05 8.53 4.70 5.16 14 Ix Intron 0 6.88 8.79 8.40 9.19 14.72 9.25 21.96 6.52 9.77 14.09 5.53 24.59 26.60 13.00 10.27 16.26 19.37 13.84 12.75 20.53 7.11 5.52 7.55 15 Ix_SR1 SilentIntronRegion 0 4.69 6.82 8.27 6.40 11.31 8.80 20.79 3.63 6.86 6.31 4.60 23.48 21.00 10.90 10.18 8.78 16.50 6.14 10.37 16.85 5.99 4.68 6.11 16 Ix_AR1 ActiveIntronRegion 0 1.15 2.45 0.45 2.14 1.89 2.33 12.73 2.36 0.70 1.43 2.99 14.27 19.19 8.34 1.78 10.67 15.98 5.33 3.33 11.65 1.75 0.00 0.00 17 Ix_AR2 ActiveIntronRegion 0 3.02 6.28 3.78 5.72 13.86 5.68 19.31 3.79 6.00 10.12 4.54 25.81 21.81 11.83 7.56 10.24 16.29 7.24 5.75 24.91 4.85 3.53 4.84 18 Ix_SR2 SilentIntronRegion 0 7.24 9.06 6.08 9.91 13.50 8.01 22.23 7.26 10.57 16.75 6.17 27.82 30.25 14.11 10.27 19.91 22.00 17.79 14.94 22.77 8.52 6.61 8.70 19 Ix_AR3 ActiveIntronRegion 0 6.69 9.34 9.57 14.64 16.84 7.44 20.66 9.81 11.23 19.87 5.82 25.80 35.33 14.95 10.64 20.07 18.88 19.20 15.44 24.64 7.75 7.37 7.84 20 Ix_SR3 SilentIntronRegion 0 14.10 14.53 21.80 11.53 30.12 20.47 27.35 10.35 15.85 22.25 5.68 11.62 21.12 13.14 12.28 20.95 17.45 16.92 11.23 15.62 4.74 2.66 8.05 21 Ix Intron 0 8.13 15.05 8.73 9.12 12.69 6.30 13.71 5.43 7.27 9.55 2.89 15.80 16.43 7.42 6.09 11.31 12.64 11.29 7.85 15.88 4.51 5.74 4.86 22 Ix_SR1 SilentIntronRegion 0 17.16 12.57 17.49 14.45 19.61 10.22 19.73 14.60 12.66 17.93 2.73 8.69 22.09 14.68 14.44 10.88 10.30 13.24 13.16 15.81 2.64 5.77 8.04 23 Ix_AR1 ActiveIntronRegion 0 23.44 25.61 27.40 23.42 22.17 10.69 25.91 13.10 14.67 17.66 5.50 21.57 41.14 13.04 19.13 6.71 16.37 10.61 13.67 20.95 4.55 8.67 5.32 24 Ix_SR2 SilentIntronRegion 0 10.44 17.03 10.32 7.83 10.22 4.99 11.86 5.57 4.96 9.42 0.84 8.75 12.18 5.69 3.53 17.17 9.83 20.63 9.89 12.33 4.96 2.42 7.45 25 Ix_AR2 ActiveIntronRegion 0 14.06 29.62 14.33 14.38 20.70 6.96 20.73 3.49 7.55 6.10 1.10 16.17 14.58 4.56 7.80 11.71 11.32 10.04 10.77 19.61 5.50 5.93 6.68 26 Ix_SR3 SilentIntronRegion 0 7.13 15.46 6.38 8.32 10.84 3.73 12.96 2.85 4.53 8.15 1.53 10.99 11.61 5.54 4.87 11.54 15.04 13.63 9.04 15.35 6.63 3.75 5.49 27 Ix_AR3 ActiveIntronRegion 0 0.00 3.31 2.52 6.95 2.10 1.08 7.89 1.29 0.00 7.89 1.71 35.23 9.01 4.27 1.54 5.30 0.91 4.96 2.62 8.26 0.73 7.64 8.98 28 Ix_AR4 ActiveIntronRegion 0 3.75 3.88 2.74 8.31 5.11 4.25 6.86 2.46 4.52 4.89 0.26 14.06 15.42 3.99 5.10 6.48 4.50 5.15 1.74 16.54 0.90 4.83 1.20 29 Ix_SR4 SilentIntronRegion 0 7.68 16.02 7.13 7.60 11.02 5.22 11.91 5.79 5.49 7.81 1.77 8.93 13.61 6.10 4.00 13.76 11.95 9.37 7.13 13.62 3.74 4.12 3.97 30 Ix_AR5 ActiveIntronRegion 0 2.67 8.80 2.14 8.06 12.22 10.32 10.94 1.97 5.35 9.04 1.86 12.05 21.27 4.95 2.45 9.85 15.47 6.68 4.28 14.79 3.18 8.00 1.94 31 Ix_AR6 ActiveIntronRegion 0 3.49 13.64 9.85 3.80 11.44 5.51 13.26 4.42 12.40 7.90 13.66 54.22 17.44 9.51 4.81 13.30 16.50 14.16 4.86 16.15 5.98 14.52 5.64 32 Ix_SR6 SilentIntronRegion 0 5.84 22.33 8.23 6.74 24.68 4.73 18.24 2.13 5.61 6.91 2.58 23.67 17.88 19.60 4.18 26.92 25.76 25.89 12.62 34.72 14.00 3.84 5.19 33 Ix Intron 0 4.60 10.97 24.08 5.28 8.36 4.80 8.39 3.70 8.96 7.16 1.48 14.55 9.48 3.40 4.51 8.42 8.68 5.78 4.54 9.27 6.52 5.56 4.45 34 Ix_SR1 SilentIntronRegion 0 5.61 8.06 31.90 4.54 7.99 4.48 9.33 3.34 8.10 5.43 1.54 18.42 11.12 3.60 4.58 8.85 9.30 4.65 4.58 10.23 6.81 5.45 4.28 35 Ix_AR2 ActiveIntronRegion 0 4.37 23.96 13.13 5.01 8.84 2.94 9.54 3.17 7.69 2.59 1.20 12.81 10.42 4.29 4.66 9.75 10.46 7.57 5.39 7.91 6.11 6.81 7.49 36 Ix_SR2 SilentIntronRegion 0 3.26 13.00 14.96 6.56 8.92 5.72 6.93 4.40 10.58 10.74 1.47 9.47 7.00 2.83 4.35 7.65 7.56 7.20 4.44 8.21 6.29 5.63 4.21 37 I1_AR1 ActiveIntronRegion 0 16.36 21.77 10.54 13.46 20.92 14.49 14.16 8.54 18.00 10.45 0.49 9.55 5.14 4.19 7.30 3.03 2.53 2.19 1.35 5.43 2.24 13.46 1.49 38 I1_SR1 SilentIntronRegion 0 9.76 9.51 4.65 7.87 9.95 13.46 6.46 3.94 15.55 8.56 0.38 5.07 0.41 2.75 4.28 3.10 0.87 3.24 2.11 5.88 1.75 5.34 3.70 39 I1_AR2 ActiveIntronRegion 0 12.94 16.44 8.12 12.17 14.27 18.14 7.33 10.49 21.88 9.97 0.54 13.69 6.79 3.35 5.79 5.12 2.33 5.17 2.70 3.98 1.24 7.72 2.90 40 I1_SR2 SilentIntronRegion 0 8.10 10.24 4.47 6.99 11.85 21.80 7.82 6.14 17.30 8.90 0.41 2.75 1.20 2.22 3.70 1.83 1.20 4.15 1.13 3.39 1.73 5.84 1.60 41 ER2a ExonRegion 0 1.76 0.24 0.00 0.24 1.58 0.65 0.00 0.27 0.89 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.78 0.00 0.00 0.00 0.00 0.00 0.00 42 E2a_E3a KnownJunction 0 13.11 0.00 0.00 0.00 0.00 0.00 0.00 1.64 1.13 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER3a ExonRegion 0 6.54 0.00 0.54 1.90 4.24 2.49 1.77 2.47 8.15 0.41 1.06 0.00 0.00 0.00 0.00 1.36 0.00 0.00 0.87 0.00 0.00 0.99 0.81 44 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E3a_E5a KnownJunction 0 3.63 0.00 0.00 5.89 3.57 0.00 0.00 2.30 4.77 0.00 0.00 0.00 0.00 0.00 0.00 4.10 0.00 0.00 0.00 0.00 0.00 2.76 0.00 46 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.08 0.00 0.11 0.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER5a ExonRegion 0 16.30 0.54 3.30 2.45 4.52 2.07 0.42 4.10 4.21 0.00 0.00 0.00 0.00 0.00 0.58 1.58 0.00 0.00 0.90 0.00 0.62 1.34 0.65 48 E5a_E6a KnownJunction 0 22.67 0.00 3.02 4.86 3.57 0.00 0.00 3.33 4.28 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 3.59 49 ER6a ExonRegion 0 17.51 0.06 2.32 1.66 5.53 2.62 3.16 3.62 5.98 0.00 0.92 0.00 0.00 0.00 0.00 1.97 0.00 0.00 0.00 0.58 2.04 1.99 0.55 50 E6a_E7a KnownJunction 0 10.22 0.00 1.24 3.06 7.81 0.00 0.00 0.00 7.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 3.41 51 ER7a ExonRegion 0 9.27 2.53 1.39 6.08 8.97 1.34 1.97 2.76 8.43 0.91 0.00 0.00 0.00 0.00 2.55 0.11 0.00 0.36 0.00 0.57 0.08 0.00 1.50 52 E7a_E8a KnownJunction 0 17.48 0.00 1.74 5.09 19.02 5.56 6.45 6.65 4.75 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.00 0.00 0.00 0.00 53 ER8a ExonRegion 0 9.14 0.36 1.06 2.31 6.56 1.30 1.95 2.04 3.36 0.34 0.00 0.00 0.00 0.15 0.16 0.32 0.06 0.15 0.00 0.04 0.24 0.30 0.10