Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HOOK1 Gene 0 11.22 36.30 31.26 30.60 47.86 66.71 62.16 36.75 21.46 60.77 2.49 0.70 152.21 196.82 97.12 7.80 175.09 9.55 16.12 18.23 0.18 0.36 0.16 2 455990 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 395561 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 371208 Transcript 0 6.90 37.78 19.25 21.71 33.26 52.69 53.44 24.24 13.66 45.82 0.48 0.15 156.57 274.31 68.73 9.15 209.82 4.82 20.40 17.81 0.02 0.13 0.02 5 465876 Transcript 0 0.00 0.00 0.00 0.19 0.01 0.00 0.00 0.00 0.00 1.48 0.00 0.00 0.38 0.27 0.00 0.00 1.59 0.18 0.00 0.21 0.00 0.00 0.00 6 474695 Transcript 1 2.44 0.00 0.08 1.78 3.04 0.00 4.64 0.00 1.10 0.04 0.00 0.00 6.34 20.11 1.19 0.10 16.75 1.02 0.00 0.00 0.00 0.00 0.00 7 466803 Transcript 0 3.40 11.36 3.37 9.80 7.83 18.94 19.85 6.31 6.64 14.69 0.76 0.00 31.95 34.66 8.84 5.30 35.47 5.20 7.46 6.70 0.00 0.29 0.49 8 491135 Transcript 0 0.09 1.02 0.36 0.83 1.98 0.81 3.06 0.22 0.10 0.31 0.07 0.00 3.42 2.49 1.24 0.00 2.68 0.92 0.15 0.86 0.00 0.00 0.00 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.61 1.04 0.00 0.00 0.85 6.53 7.84 0.00 0.17 3.11 0.00 0.00 2.24 37.68 7.45 1.47 33.25 6.14 3.69 1.66 0.00 0.00 0.00 11 E2_Ab KnownBoundary 0 0.00 2.89 2.60 0.00 4.07 18.68 21.46 3.70 4.43 8.35 0.00 0.00 6.66 50.68 8.90 4.02 111.17 17.12 21.65 5.31 0.00 0.00 0.00 12 ER2b ExonRegion 0 0.12 0.93 0.35 0.32 1.48 5.87 3.77 1.53 3.30 5.85 0.72 0.00 11.79 49.14 16.49 0.92 69.17 2.77 3.58 1.30 0.00 0.00 0.00 13 E2a_E3a KnownJunction 1 3.48 0.00 2.93 2.06 7.81 0.00 3.80 8.63 7.23 16.98 0.00 0.00 33.11 154.57 19.53 8.37 198.41 18.20 8.75 11.06 0.00 0.00 0.00 14 ER2c ExonRegion 1 2.12 0.25 2.45 2.04 5.35 4.58 2.65 8.43 7.41 16.20 0.00 0.00 33.42 136.22 21.03 5.94 180.72 14.09 9.95 8.51 0.00 0.00 0.00 15 ER2d ExonRegion 0 0.00 0.00 0.00 0.57 0.03 0.00 0.00 0.00 0.00 1.53 0.00 0.00 1.15 0.80 0.00 0.00 0.00 0.55 0.00 0.63 0.00 0.00 0.00 16 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER3a ExonRegion 1 0.86 3.64 1.41 3.12 6.78 12.18 10.48 6.87 10.58 26.69 1.69 0.00 44.99 212.93 43.92 8.43 237.24 26.00 19.67 24.17 0.00 0.00 1.74 18 E3a_E4a KnownJunction 1 0.00 6.71 0.00 5.63 0.00 20.10 24.11 6.00 19.82 17.81 5.00 0.00 51.62 190.83 37.58 4.27 179.34 26.16 0.00 18.15 0.00 0.00 0.00 19 ER4a ExonRegion 1 0.96 5.77 4.11 7.69 17.56 16.13 33.15 7.91 14.74 23.11 0.71 0.00 88.08 215.18 47.85 3.13 234.18 19.79 12.13 11.34 0.00 0.00 0.00 20 E4a_E5a KnownJunction 1 3.63 9.54 7.72 9.76 15.87 22.94 58.87 5.91 8.19 32.21 0.00 0.00 53.89 287.19 63.79 11.54 316.04 14.63 22.49 20.33 0.00 0.00 0.00 21 ER5a ExonRegion 1 1.74 3.91 7.83 11.62 13.38 42.11 40.21 13.76 17.34 37.53 1.10 0.00 107.04 307.18 54.33 20.05 354.23 14.82 22.05 23.45 0.00 0.00 0.00 22 E5a_E6a KnownJunction 1 3.70 0.00 11.92 15.02 22.92 41.51 34.23 20.04 22.28 34.60 2.68 0.00 88.96 358.35 39.19 19.99 314.17 10.16 21.65 26.14 0.00 0.00 0.00 23 ER6a ExonRegion 1 2.07 12.11 11.77 9.84 16.82 30.82 36.46 12.67 16.80 26.21 3.78 0.00 125.11 308.74 44.85 8.94 311.95 12.86 16.09 25.60 0.00 0.80 0.00 24 E6a_E8a KnownJunction 1 0.00 3.35 18.72 16.38 8.66 25.50 94.29 12.16 20.02 34.95 2.58 0.00 172.39 349.93 62.55 8.12 359.70 9.87 16.00 21.03 0.00 0.00 0.00 25 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER8a ExonRegion 1 0.00 3.39 19.61 13.63 8.03 34.23 70.83 9.22 21.00 31.35 4.19 0.00 150.86 347.56 55.12 5.94 353.75 9.55 17.52 21.28 0.00 0.00 0.00 27 ER8b ExonRegion 1 0.00 9.15 20.55 9.03 34.48 32.15 51.85 11.43 15.46 31.08 7.01 0.00 213.17 316.34 37.48 15.15 304.16 9.21 10.79 20.14 0.00 0.00 0.00 28 E8b_E9a KnownJunction 1 0.00 19.40 18.80 5.63 40.07 48.72 35.55 14.25 7.55 37.79 7.16 0.00 183.75 248.93 38.20 8.03 277.05 11.77 7.72 34.39 0.00 0.00 0.00 29 ER9a ExonRegion 1 1.44 11.04 10.19 5.73 16.73 40.14 40.06 18.44 12.31 33.42 3.13 0.00 172.27 285.02 45.22 9.29 307.66 16.01 16.84 21.21 0.00 1.22 0.00 30 E9a_E10a KnownJunction 1 7.41 9.67 8.63 7.36 21.99 41.68 42.84 23.70 15.34 27.18 2.37 0.00 161.84 366.36 79.86 19.48 345.86 16.21 8.09 23.01 0.00 2.76 0.00 31 ER10a ExonRegion 1 3.10 17.04 16.38 8.23 20.00 38.71 40.95 21.63 24.67 41.79 13.67 0.00 220.21 318.75 52.98 10.19 345.38 16.65 13.84 35.41 0.00 0.35 0.00 32 E10a_E11a KnownJunction 1 3.26 21.31 26.14 12.19 17.32 33.84 40.01 15.24 22.66 71.53 12.42 0.00 294.62 290.42 53.28 12.82 351.94 19.03 22.21 24.74 0.00 0.00 0.00 33 ER11a ExonRegion 1 7.97 16.67 14.57 13.71 25.46 64.53 70.59 16.03 22.53 59.41 10.61 0.00 320.89 300.69 66.69 10.46 374.37 17.11 13.29 28.72 1.11 0.00 0.00 34 E11a_E12a KnownJunction 1 10.37 32.56 16.29 21.81 17.06 74.16 79.58 23.33 23.09 69.92 9.27 0.00 423.19 288.66 31.52 7.43 396.45 17.70 18.17 52.22 5.81 0.00 0.00 35 ER12a ExonRegion 1 3.36 15.71 13.44 15.14 18.45 51.09 60.67 25.12 22.48 58.65 5.70 2.58 341.08 289.01 67.33 10.60 393.81 11.86 11.88 25.94 2.84 0.00 0.00 36 E12a_E13a KnownJunction 1 14.37 17.96 20.11 18.68 23.09 64.45 60.06 27.48 25.98 67.72 4.42 0.00 486.33 378.95 72.32 8.72 435.06 14.72 20.42 49.92 6.18 0.00 0.00 37 ER13a ExonRegion 0 3.65 19.35 19.51 14.78 31.57 62.32 75.54 25.40 29.18 63.83 4.76 3.79 384.56 324.94 98.23 14.26 461.10 16.16 26.29 33.04 0.44 0.32 0.00 38 E13a_E14a KnownJunction 0 6.59 25.32 28.24 13.68 23.85 41.06 86.69 33.52 29.46 86.60 7.00 0.00 362.80 356.47 130.91 0.00 479.66 18.28 46.02 45.32 0.00 3.12 0.00 39 ER14a ExonRegion 0 10.12 14.71 25.34 16.45 35.85 52.22 58.42 29.93 22.41 67.84 3.47 5.62 366.41 327.63 92.84 17.86 468.43 22.92 35.96 45.20 2.70 0.38 0.93 40 E14a_E15a KnownJunction 1 6.96 12.04 15.26 19.98 41.00 99.66 85.63 29.45 18.95 75.21 7.21 0.00 316.21 298.61 57.48 23.41 459.00 18.12 12.33 23.97 2.97 0.00 4.01 41 ER15a ExonRegion 0 10.56 32.42 20.98 17.69 51.39 81.94 86.30 44.29 21.25 80.06 5.40 2.66 432.76 357.95 101.74 18.85 478.40 22.61 40.07 40.93 0.43 2.41 0.53 42 E15a_E16a KnownJunction 0 13.93 38.48 13.69 20.28 60.44 58.77 68.94 29.94 10.56 58.80 4.69 0.00 340.40 274.41 78.50 29.74 296.40 23.21 18.26 49.34 0.00 0.00 0.00 43 ER16a ExonRegion 1 4.13 20.17 18.54 23.12 39.74 65.72 60.23 29.24 14.44 58.29 4.97 2.77 330.76 313.46 70.82 23.97 353.30 24.78 14.99 29.44 0.00 0.00 0.82 44 E16a_E17a KnownJunction 1 2.89 15.72 21.08 27.10 25.81 75.58 65.58 28.46 16.72 69.55 2.53 0.00 341.86 331.86 53.28 20.34 394.20 22.55 8.56 14.70 0.00 0.00 4.10 45 ER17a ExonRegion 1 5.73 31.92 19.77 18.46 41.45 55.47 56.46 30.27 14.87 57.75 3.30 0.14 250.14 386.20 72.14 17.65 360.90 25.00 26.54 29.26 0.00 0.00 1.04 46 E17_Ab KnownBoundary 1 2.89 54.60 10.94 18.88 33.96 79.84 83.86 24.44 13.19 45.72 2.21 0.00 227.10 318.03 78.13 19.40 330.43 13.02 27.39 33.88 0.00 0.00 0.00 47 ER17b ExonRegion 1 6.77 38.32 10.76 20.44 30.74 85.46 74.70 22.12 14.46 46.36 2.36 5.87 229.08 350.56 69.24 17.17 326.13 19.96 22.16 21.04 0.00 0.00 0.00 48 E17a_E18a KnownJunction 1 7.56 17.76 9.22 24.21 39.90 108.01 99.41 26.53 16.84 47.63 0.00 6.30 224.50 375.95 61.56 15.81 318.09 20.27 15.25 11.89 0.00 0.00 0.00 49 E18_Aa NovelBoundary 0 0.00 2.50 0.00 4.49 0.00 29.70 14.79 2.22 3.33 6.31 2.47 0.00 21.10 9.54 8.90 0.00 9.44 1.99 4.24 0.00 0.00 0.00 0.00 50 ER18a ExonRegion 1 9.77 24.88 15.07 21.82 42.16 65.57 63.89 23.11 15.57 48.51 3.19 0.92 203.77 334.95 58.09 16.09 306.32 23.14 13.25 25.12 0.00 0.00 0.00 51 E18_Da NovelBoundary 0 9.93 5.46 2.81 5.43 0.00 10.39 26.01 1.64 4.86 8.86 2.53 0.00 26.78 23.54 8.90 0.00 12.72 5.35 0.00 0.00 0.00 0.00 0.00 52 E18a_E19a KnownJunction 0 3.78 0.00 0.00 3.20 3.82 0.00 5.43 0.00 1.53 0.00 0.00 0.00 6.82 23.84 0.00 0.00 24.87 1.66 0.00 0.00 0.00 0.00 0.00 53 E18a_E20a KnownJunction 1 0.00 34.40 7.39 13.32 19.35 40.54 56.57 9.61 6.66 28.31 0.00 0.00 158.59 337.28 40.42 11.54 214.21 3.73 20.99 19.69 0.00 0.00 0.00 54 E18a_E21a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 55 I18 Intron 0 2.08 7.79 4.70 7.00 6.30 14.05 18.18 4.23 5.04 10.38 0.32 0.20 26.04 31.21 5.84 1.30 26.73 3.12 4.53 6.29 0.00 0.00 0.16 56 I18_SR1 SilentIntronRegion 0 0.87 4.74 0.55 6.55 6.75 15.26 17.41 3.12 5.02 12.80 0.00 1.47 19.78 34.91 6.18 2.90 15.04 4.41 4.37 6.11 0.00 0.00 0.00 57 I18_AR1 ActiveIntronRegion 0 2.32 9.03 6.16 7.39 7.59 16.11 19.61 4.46 4.93 10.16 0.49 0.00 29.33 32.63 6.08 1.41 33.49 3.35 5.81 6.66 0.00 0.00 0.00 58 E19_Aa NovelBoundary 0 0.00 19.21 0.00 1.73 11.21 16.52 16.16 2.09 4.60 3.57 0.00 0.00 13.47 27.14 0.00 4.36 4.77 0.00 0.00 4.79 0.00 0.00 0.00 59 ER19a ExonRegion 0 1.11 0.00 0.17 0.37 2.25 0.00 3.85 0.00 0.67 0.08 0.00 0.00 5.86 16.39 2.37 0.20 8.63 0.38 0.00 0.00 0.00 0.00 0.00 60 E19a_E20a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 8.30 0.00 0.00 0.00 0.00 0.00 6.82 11.60 4.45 0.00 21.69 0.00 0.00 2.94 0.00 0.00 0.00 61 E20_Ab NovelBoundary 0 6.45 19.93 0.00 6.06 8.66 0.00 16.74 4.85 3.56 3.12 0.00 0.00 40.91 66.46 8.90 0.00 78.54 0.00 10.07 11.57 0.00 2.63 0.00 62 ER20a ExonRegion 1 2.12 29.74 8.12 12.44 23.08 34.15 44.02 11.67 8.03 39.28 0.00 0.00 172.94 306.96 39.89 10.03 226.94 2.54 22.30 21.54 0.00 0.00 0.00 63 E20_Da NovelBoundary 0 3.70 16.05 8.13 14.78 12.14 7.55 4.50 16.43 10.45 19.47 2.63 0.00 53.41 44.97 4.45 4.36 32.82 4.81 19.20 2.94 0.00 0.00 0.00 64 E20a_E20c KnownJunction 1 7.11 34.80 9.34 12.12 15.53 41.23 30.78 18.24 9.98 29.60 0.00 0.00 152.91 260.93 46.36 7.86 267.88 5.93 20.14 12.21 0.00 0.00 0.00 65 ER20b ExonRegion 1 5.33 39.09 9.85 16.00 17.34 47.20 28.93 19.91 10.70 42.99 1.72 0.00 178.22 295.29 42.98 9.14 260.77 5.61 26.66 19.31 0.00 0.00 0.00 66 ER20c ExonRegion 0 3.40 11.36 3.37 9.80 7.83 18.94 19.85 6.31 6.64 14.69 0.76 0.00 31.95 34.66 8.84 5.30 35.47 5.20 7.46 6.70 0.00 0.29 0.49 67 E20_Ac KnownBoundary 0 0.00 17.17 7.13 9.16 25.47 36.17 25.70 1.56 7.84 15.66 2.11 0.00 46.26 43.85 4.45 3.67 31.42 7.50 4.42 16.87 0.00 3.00 4.35 68 ER20d ExonRegion 1 11.77 65.64 18.25 32.24 44.90 71.03 76.29 24.89 18.03 66.27 2.83 0.00 201.84 301.23 65.74 11.45 286.82 12.66 26.30 26.39 0.00 0.81 0.68 69 E20b_E21a KnownJunction 1 5.93 90.71 16.97 26.77 50.85 54.80 61.21 23.12 12.73 68.07 2.53 0.00 250.80 273.88 51.92 12.30 203.74 11.69 17.04 17.96 0.00 0.00 0.00 70 ER21a ExonRegion 0 4.00 64.67 13.25 20.62 44.22 74.48 84.20 29.28 17.51 70.62 1.97 0.00 254.98 242.12 62.51 4.41 232.04 13.26 15.23 24.20 0.00 0.00 0.00 71 E21a_E22a KnownJunction 0 7.04 97.68 9.49 22.77 49.92 57.81 75.08 41.16 24.39 82.04 2.47 0.00 332.77 194.42 102.60 4.27 249.09 14.72 7.53 25.31 0.00 0.00 0.00 72 ER22a ExonRegion 0 15.60 66.45 14.32 28.13 50.31 80.29 67.56 39.82 21.72 64.62 3.92 0.00 271.56 264.43 83.65 4.87 243.20 12.55 22.73 32.44 0.00 0.00 0.00 73 E22a_E23b KnownJunction 0 29.93 80.12 13.99 37.32 61.80 153.15 112.88 37.50 17.39 58.32 7.63 0.00 194.95 295.31 89.87 0.00 277.70 10.07 26.73 41.55 0.00 0.00 0.00 74 ER23a ExonRegion 0 0.09 1.02 0.36 0.83 1.98 0.81 3.06 0.22 0.10 0.31 0.07 0.00 3.42 2.49 1.24 0.00 2.68 0.92 0.15 0.86 0.00 0.00 0.00 75 E23_Ab KnownBoundary 0 0.00 0.00 4.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76 ER23b ExonRegion 0 9.84 79.49 23.79 38.60 50.88 86.11 100.52 45.40 16.35 61.24 8.87 0.00 214.36 338.32 87.81 11.45 301.60 21.11 24.64 29.07 0.00 0.00 0.00 77 E23a_E24a KnownJunction 1 17.19 107.28 40.92 55.97 50.85 66.95 110.45 58.86 18.92 67.18 2.26 0.00 322.71 409.27 92.34 17.69 288.83 24.66 13.74 31.51 0.00 0.00 0.00 78 ER24a ExonRegion 0 4.13 56.74 20.24 23.20 26.42 56.43 63.39 25.00 12.89 42.62 2.15 0.99 159.74 269.69 73.90 7.87 187.68 11.89 15.17 19.37 0.00 0.00 0.00 79 E24_Da KnownBoundary 0 0.00 27.23 3.58 2.63 11.38 34.01 22.26 7.23 4.66 4.46 0.00 0.00 38.80 91.94 15.33 3.93 26.65 1.87 0.00 5.37 0.00 0.00 0.00 80 E24_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.17 21.01 13.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81 E24_Dc KnownBoundary 0 6.74 31.11 8.31 14.42 28.35 78.99 54.50 16.63 8.01 28.04 0.00 0.00 286.99 341.28 93.70 16.49 169.61 13.68 12.61 12.34 0.00 0.00 0.00 82 ER24b ExonRegion 0 0.00 33.55 11.64 8.52 13.38 48.14 37.73 14.69 8.65 16.63 0.00 0.00 116.08 181.50 52.95 2.97 80.05 6.01 0.00 6.38 0.00 0.00 0.00 83 ER24c ExonRegion 0 2.79 22.29 7.21 9.59 17.66 42.76 31.78 12.86 5.93 21.42 0.00 0.00 153.08 227.64 68.12 12.13 102.46 9.46 5.99 6.38 0.00 0.00 0.00 84 ER24d ExonRegion 0 18.36 52.16 52.13 48.98 75.06 94.83 82.39 57.43 29.99 86.06 1.93 0.60 141.83 192.08 148.23 7.16 130.25 7.10 18.17 17.79 0.07 0.50 0.09