Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZRANB2 Gene 0 129.15 84.91 63.67 116.58 164.34 175.83 142.03 113.73 98.51 141.64 152.27 398.37 284.99 195.19 98.61 181.78 150.81 85.38 66.11 54.42 65.74 130.16 100.52 2 370920 Transcript 0 17.73 6.64 10.00 8.81 11.64 20.55 17.72 9.96 5.67 8.95 9.42 27.32 17.11 14.02 12.25 14.00 8.18 2.93 3.27 5.05 7.71 4.91 9.58 3 254821 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 487510 Transcript 1 112.33 44.20 25.86 49.25 130.89 90.87 127.26 55.32 50.56 66.49 76.27 544.37 328.91 154.15 61.78 140.05 72.52 55.36 29.25 28.90 31.13 113.88 67.75 5 477096 Transcript 1 109.44 95.21 54.97 133.44 238.72 240.03 174.96 166.35 143.07 203.81 98.71 525.23 381.59 161.09 73.38 116.71 72.97 47.05 46.05 51.88 24.20 194.35 61.82 6 473260 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 479947 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 24.18 8.54 2.03 6.04 11.69 29.79 20.22 4.36 3.32 5.28 15.29 1.96 26.41 15.86 10.00 24.05 16.37 5.85 6.54 5.14 15.41 7.39 19.16 9 E1_Ab KnownBoundary 1 344.51 131.95 25.04 84.74 163.41 390.68 251.51 48.88 42.74 47.87 94.34 53.42 607.10 183.18 161.20 240.71 230.39 72.54 63.63 59.76 164.08 106.06 245.93 10 ER1b ExonRegion 1 1357.67 370.08 177.51 328.19 653.75 674.42 683.97 309.39 263.25 323.38 662.25 290.20 942.89 557.74 343.04 1639.19 999.06 625.58 500.86 268.68 508.53 266.87 1070.72 11 E1a_E2a KnownJunction 0 231.45 90.90 122.38 232.11 111.55 98.75 103.34 274.54 195.89 261.02 324.56 714.23 753.52 231.62 114.47 293.94 522.95 361.72 181.46 45.45 120.65 72.50 133.08 12 ER2a ExonRegion 1 125.31 44.32 86.52 132.71 80.32 63.59 68.57 156.44 126.47 176.86 311.20 342.60 294.50 155.79 86.71 152.25 471.65 180.07 99.29 43.96 246.40 46.43 79.51 13 E2a_E3a KnownJunction 1 138.69 30.98 60.17 87.33 78.01 44.07 74.02 78.00 108.80 165.09 473.86 258.83 93.01 165.81 110.02 45.12 620.20 48.83 57.60 76.51 495.52 51.62 37.82 14 ER3a ExonRegion 0 87.28 77.85 185.71 314.46 117.51 67.73 79.00 257.75 251.20 310.88 675.70 452.17 679.50 554.55 310.86 1022.03 884.25 400.06 341.33 237.97 425.88 273.09 679.15 15 E3a_E4a KnownJunction 1 128.99 133.92 204.55 449.46 248.98 136.68 177.53 338.16 272.42 314.63 440.16 807.11 2700.96 531.94 389.02 2542.84 631.60 791.47 683.22 251.26 160.74 244.57 1784.35 16 ER4a ExonRegion 0 70.10 114.03 191.17 314.92 703.01 610.15 503.68 184.44 166.93 238.65 335.00 544.00 815.44 349.24 202.11 577.06 348.66 322.58 206.36 146.06 116.82 187.27 402.78 17 E4a_E5a KnownJunction 1 101.94 219.24 222.91 295.27 752.21 971.83 1020.91 141.38 147.77 214.04 325.56 483.91 375.46 337.10 168.86 126.21 287.61 65.04 82.73 155.51 78.95 190.68 82.03 18 ER5a ExonRegion 0 500.05 330.50 233.36 344.62 335.96 439.21 449.89 172.28 189.71 240.92 330.45 860.89 480.94 428.09 223.66 198.40 285.93 77.87 79.10 139.54 58.44 290.66 112.01 19 E5a_E6a KnownJunction 0 2064.29 479.26 261.73 437.01 477.00 334.58 288.34 197.40 225.92 275.47 372.20 1227.40 937.93 566.43 406.70 332.73 353.06 85.23 137.42 156.21 45.59 307.02 188.23 20 ER6a ExonRegion 0 677.57 217.88 201.98 305.08 275.11 235.03 228.40 208.00 198.41 259.93 423.78 1081.66 735.01 529.61 284.56 367.75 342.00 137.06 119.53 141.01 61.12 293.05 194.06 21 E6a_E7a KnownJunction 0 323.84 214.90 207.77 315.34 357.05 287.16 272.84 211.41 255.96 312.54 666.48 1436.72 814.72 711.82 330.18 414.25 505.56 186.75 223.07 152.00 134.67 354.24 201.54 22 ER7a ExonRegion 0 160.84 166.60 154.58 234.59 288.10 302.13 243.42 200.03 202.66 277.61 588.98 1394.16 781.94 734.65 337.07 524.25 575.95 249.54 175.34 163.45 214.68 276.27 256.14 23 E7_Da NovelBoundary 1 92.91 26.97 31.43 41.25 79.03 92.62 143.22 49.25 57.03 63.56 116.24 729.84 282.61 240.22 45.12 167.82 178.21 72.88 29.18 13.87 61.22 84.81 99.19 24 E7a_E8b KnownJunction 0 112.83 117.08 116.26 180.60 183.28 227.94 133.64 123.26 137.44 190.05 448.69 793.16 450.13 618.46 345.51 328.72 313.51 194.83 127.44 128.09 191.82 111.63 163.38 25 I7 Intron 1 45.28 35.10 16.19 37.51 86.05 57.70 82.94 49.01 41.00 56.39 39.56 481.35 398.39 107.94 46.76 59.72 44.88 15.05 17.59 24.39 8.90 116.32 29.30 26 I7_AR1 ActiveIntronRegion 1 45.36 35.17 16.21 37.58 86.20 57.80 83.09 49.10 41.08 56.50 39.63 482.19 399.11 108.13 46.84 59.83 44.95 15.08 17.62 24.43 8.91 116.53 29.35 27 E8_Aa NovelBoundary 1 89.28 73.87 23.42 70.99 230.22 106.02 136.29 84.45 50.58 56.87 37.17 485.11 553.05 74.34 32.76 45.89 28.99 11.57 17.13 25.44 4.94 147.45 44.22 28 ER8a ExonRegion 1 112.33 44.20 25.86 49.25 130.89 90.87 127.26 55.32 50.56 66.49 76.27 544.37 328.91 154.15 61.78 140.05 72.52 55.36 29.25 28.90 31.13 113.88 67.75 29 E8_Ab KnownBoundary 1 174.48 45.85 34.62 47.51 123.09 106.30 131.52 78.33 52.29 72.50 105.97 570.04 401.11 207.14 55.13 254.38 145.86 108.44 41.79 43.46 78.64 116.34 119.00 30 ER8b ExonRegion 0 151.48 162.52 166.74 249.74 231.76 286.26 222.10 195.46 182.77 301.38 682.63 1328.74 686.54 825.34 395.28 704.88 610.86 431.43 194.86 182.36 339.42 240.62 304.56 31 E8_Da NovelBoundary 0 67.12 21.77 26.73 35.63 132.00 66.16 150.73 36.06 54.83 74.33 62.96 237.68 171.58 125.91 54.14 139.88 78.73 73.75 33.98 47.87 71.04 77.95 68.46 32 E8a_E9d KnownJunction 0 240.49 165.96 169.07 274.02 267.06 267.74 199.44 194.36 194.41 340.34 787.09 1044.34 575.12 824.01 453.80 837.22 819.07 496.28 287.44 180.63 326.25 322.39 344.78 33 I8 Intron 0 127.64 34.45 26.68 46.55 156.01 89.18 107.96 42.34 39.25 64.77 54.37 238.80 155.48 102.19 49.24 99.34 74.32 31.32 31.27 23.90 28.27 79.23 47.46 34 I8_AR1 ActiveIntronRegion 0 99.89 32.40 27.72 47.77 117.72 83.34 102.27 39.93 39.65 65.24 56.21 254.91 162.70 106.91 50.52 97.72 79.24 30.38 28.96 26.16 31.09 77.06 47.40 35 I8_AR2 ActiveIntronRegion 0 293.66 47.02 20.82 39.89 384.78 124.89 143.01 57.11 37.31 62.79 44.07 146.13 114.54 75.51 42.28 110.13 46.05 37.29 45.41 10.78 11.85 93.06 48.35 36 I8 Intron 0 13.86 23.79 0.00 2.85 25.04 18.88 9.91 4.82 1.72 5.60 18.99 134.17 94.49 37.24 12.86 12.52 13.90 5.61 7.45 9.96 1.03 25.35 9.62 37 I8_AR1 ActiveIntronRegion 0 14.12 24.23 0.00 2.90 25.48 19.23 10.10 4.89 1.75 5.68 19.35 136.60 96.26 37.90 13.10 12.75 14.16 5.72 7.56 10.14 1.05 25.80 9.77 38 E9_Aa NovelBoundary 1 20.89 62.29 9.37 32.73 51.02 93.98 48.36 46.13 69.65 111.99 34.48 254.93 257.78 77.52 19.66 53.92 34.78 3.90 25.69 11.89 8.22 59.52 32.61 39 ER9a ExonRegion 1 50.76 44.63 17.38 56.41 143.70 145.17 100.44 93.21 88.52 109.74 39.20 420.53 293.40 108.76 39.29 59.83 27.80 23.28 15.20 30.77 7.40 108.67 31.49 40 E9_Ab KnownBoundary 1 101.20 70.25 33.71 70.15 307.39 324.76 188.62 133.37 94.85 120.85 35.80 539.88 247.55 139.09 36.59 23.16 22.07 15.17 16.85 30.55 8.90 106.24 66.50 41 ER9b ExonRegion 1 80.18 37.79 14.44 44.45 105.85 140.67 104.34 101.96 66.84 93.88 25.59 317.49 180.92 85.12 26.23 38.86 21.35 19.12 19.86 17.84 7.24 91.31 29.68 42 E9_Ac KnownBoundary 1 95.72 28.88 9.76 25.47 56.79 85.92 75.30 42.18 39.76 61.27 23.16 227.92 132.95 43.91 17.80 42.81 22.44 13.39 13.65 9.20 0.00 45.62 15.88 43 ER9c ExonRegion 1 55.77 31.04 8.33 28.61 99.76 177.41 108.18 46.95 25.08 38.71 10.22 224.28 116.97 65.03 21.34 50.45 13.12 19.18 17.06 8.43 5.57 54.36 29.48 44 E9_Ad KnownBoundary 1 142.17 79.99 11.29 24.17 137.95 374.22 177.93 37.83 30.38 33.66 12.74 249.23 131.16 158.34 39.06 91.43 35.72 18.70 34.73 9.14 23.85 61.23 54.80 45 ER9d ExonRegion 0 221.71 224.98 158.72 253.13 259.87 384.73 329.06 228.23 211.62 335.56 542.91 952.81 441.78 789.15 386.49 544.56 622.20 320.76 213.94 143.24 299.29 268.22 245.01 46 E9_Da KnownBoundary 1 98.98 76.57 39.32 59.73 136.76 128.73 103.34 70.93 44.73 71.13 80.34 159.05 110.54 109.72 15.20 98.69 104.44 27.90 64.10 52.86 55.78 93.81 43.96 47 E9a_E9e KnownJunction 1 42.97 78.47 75.10 128.26 78.61 126.69 134.34 90.94 60.50 122.52 109.50 230.93 54.87 118.49 118.92 79.81 104.35 146.12 84.33 38.54 138.44 78.81 81.01 48 E9a_E10a KnownJunction 0 60.90 116.03 16.56 55.37 111.38 70.24 53.39 65.88 60.13 80.26 172.68 569.14 231.32 410.62 181.84 269.33 243.66 69.48 38.12 31.00 27.43 64.72 64.53 49 ER9e ExonRegion 0 168.13 145.79 92.55 210.47 333.75 334.90 249.48 239.48 197.63 297.89 158.22 629.93 469.77 213.41 107.47 173.58 118.14 70.83 76.89 73.00 40.99 280.04 92.15 50 E9_Ae KnownBoundary 1 193.74 71.70 116.17 207.67 348.56 318.96 243.03 243.94 186.40 280.63 190.84 408.28 613.76 269.82 55.50 172.18 153.16 116.11 100.80 69.41 104.09 150.51 86.99 51 ER9f ExonRegion 0 280.18 203.99 158.45 254.31 380.46 494.41 316.09 283.02 197.84 341.41 316.71 749.17 720.81 424.84 213.95 400.35 291.37 302.98 217.59 105.15 286.63 244.31 204.33 52 E9_Db NovelBoundary 0 119.13 62.55 60.32 92.33 106.45 104.88 75.21 86.63 61.80 89.02 90.65 193.71 211.84 182.30 81.59 53.66 92.01 38.05 47.06 17.83 32.06 68.09 39.78 53 E9b_E10a KnownJunction 0 210.19 171.09 142.81 235.00 253.99 311.35 225.58 168.32 130.84 240.50 146.14 448.20 227.42 196.95 152.54 223.79 182.42 235.99 220.34 91.34 198.06 130.55 175.25 54 E10_Aa NovelBoundary 0 154.69 103.53 45.33 69.75 187.18 154.57 94.86 73.32 64.32 99.60 93.23 282.54 180.51 135.79 79.49 94.76 68.91 20.23 29.27 20.45 10.81 76.91 59.33 55 ER10a ExonRegion 0 160.52 145.46 121.46 223.01 206.14 318.40 196.52 170.68 150.95 239.77 333.56 629.22 230.55 459.94 234.72 307.12 383.42 235.10 148.15 79.77 203.69 134.12 156.91 56 E10_Da KnownBoundary 1 209.59 81.96 141.69 203.40 231.92 265.59 240.16 174.77 125.00 204.23 310.92 361.02 121.10 418.51 185.55 164.49 274.52 133.48 56.57 63.41 136.96 121.98 113.62 57 ER10b ExonRegion 0 148.28 71.55 97.66 139.76 132.65 206.61 163.89 114.03 96.11 133.04 252.04 324.19 138.28 389.79 152.18 186.61 201.85 113.38 75.19 56.42 109.72 99.50 96.55 58 E10_Db KnownBoundary 0 115.28 73.61 28.36 45.68 128.01 155.88 108.42 51.51 38.83 45.05 163.62 308.80 137.00 301.61 116.69 165.85 120.24 29.60 77.56 53.31 59.43 89.95 73.67 59 E10_Dc KnownBoundary 0 89.72 87.02 63.04 69.32 89.13 139.47 108.99 72.91 61.57 95.66 148.83 221.17 205.51 167.82 55.88 80.92 123.80 41.95 30.78 19.37 36.94 49.05 56.94 60 ER10c ExonRegion 0 122.18 80.79 99.14 107.67 117.00 187.55 139.02 111.25 84.66 112.92 205.41 307.79 154.77 366.61 108.40 175.09 147.34 89.03 72.97 45.84 68.72 88.64 83.56 61 ER10d ExonRegion 0 25.04 18.87 11.25 15.68 16.44 23.27 19.89 12.39 10.20 13.04 8.26 30.77 16.14 14.57 11.56 11.63 4.95 4.76 4.49 2.99 1.98 6.81 5.68 62 E10_Dd KnownBoundary 1 175.73 66.57 146.89 201.87 239.30 144.80 123.74 160.35 124.71 178.77 80.34 347.06 226.93 49.15 169.97 57.42 43.76 12.44 22.40 47.11 2.78 90.07 12.63 63 ER10e ExonRegion 1 86.83 35.03 56.98 83.37 119.74 76.97 65.40 58.81 45.70 64.91 39.48 247.54 115.14 51.04 118.30 26.82 21.29 5.31 11.15 24.73 0.77 39.74 5.29 64 ER10f ExonRegion 0 11.29 4.75 17.97 11.58 11.59 11.31 15.23 15.56 8.03 12.62 3.54 52.68 7.82 12.18 14.51 3.96 0.00 0.00 0.00 4.96 0.00 2.43 0.00