Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RPL5 Gene 0 2954.87 4767.87 5717.69 3176.06 1766.86 1603.12 1223.49 1509.88 609.05 1692.46 3028.59 2847.25 1882.70 1933.70 2871.22 1917.81 2355.70 1121.18 3072.85 584.17 1793.71 1773.04 1471.15 2 432788 Transcript 1 714.85 1869.80 60.81 25.22 401.13 482.01 358.22 15.84 21.27 21.98 285.58 10.80 12.38 227.34 369.07 502.27 283.90 65.50 1019.70 79.92 285.99 220.41 455.31 3 370321 Transcript 1 91.01 217.59 47.79 44.98 85.62 31.17 50.31 29.38 14.82 22.94 56.05 64.94 28.14 71.46 40.62 47.55 46.21 7.39 41.41 10.64 35.26 20.84 52.86 4 470843 Transcript 0 13.46 11.76 4.60 5.05 8.02 9.63 10.65 3.97 3.44 1.51 13.64 10.79 9.73 9.17 4.47 9.58 14.60 8.46 6.70 3.28 8.00 6.85 9.53 5 490963 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 315741 Transcript 0 1.80 0.71 2.51 1.23 0.80 0.37 0.20 1.38 0.99 2.06 1.45 0.00 4.46 0.49 0.00 5.20 0.50 1.11 0.48 0.74 3.42 0.94 0.00 7 461952 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 497519 Transcript 0 54.44 42.19 88.03 31.95 43.31 15.82 29.35 33.92 32.32 28.47 67.16 57.40 40.43 28.96 30.37 33.78 46.29 22.34 28.46 12.31 20.07 41.29 22.42 9 IG50_SR3 SilentIntergenicRegion 0 2.12 0.00 1.12 0.00 0.00 0.00 5.02 1.73 26.55 1.86 0.00 0.00 1.76 3.92 0.00 0.00 0.00 1.85 9.56 0.00 0.00 0.00 2.94 10 IG50_AR2 ActiveIntergenicRegion 0 0.35 0.00 1.23 0.91 0.00 0.00 5.30 1.73 26.14 1.15 0.00 2.89 4.69 2.44 0.00 0.00 0.00 1.85 8.49 0.00 0.00 0.00 2.94 11 IG50_SR4 SilentIntergenicRegion 0 0.00 0.00 1.23 1.36 0.00 0.00 2.65 1.73 25.55 1.15 0.00 4.33 4.69 2.64 0.00 0.00 0.00 1.85 0.60 0.00 0.00 0.00 1.65 12 IG50_SR5 SilentIntergenicRegion 0 0.00 0.00 1.23 1.36 0.00 0.00 2.13 0.00 17.22 0.00 1.61 4.09 1.56 3.70 0.64 0.00 0.00 0.00 2.83 0.00 3.18 0.00 0.00 13 ER1a ExonRegion 1 2815.08 7463.45 173.74 77.47 1574.33 1867.29 1402.91 31.20 8.91 33.14 1041.53 11.62 17.03 792.31 1410.93 1911.39 1065.67 170.97 4041.05 288.80 1044.33 814.99 1725.97 14 ER1b ExonRegion 1 13356.28 34403.07 2364.35 1227.96 7176.35 8539.08 6106.11 430.96 164.48 637.30 5107.69 37.52 63.32 3063.90 6269.12 7332.73 4656.46 1018.42 14913.34 1280.49 4282.54 3834.02 7134.57 15 ER1c ExonRegion 1 16391.21 40888.88 3505.96 2011.23 8519.20 9970.89 7081.30 760.77 320.95 1051.71 6563.30 64.32 103.85 3734.31 7238.21 8662.05 5545.98 1569.27 17548.17 1494.22 4943.55 4562.61 8433.20 16 ER1d ExonRegion 1 23225.21 54692.20 8431.55 5059.75 12392.79 13934.99 9973.23 1981.17 904.04 2575.16 11416.87 242.11 351.14 4561.81 9233.85 11114.73 9217.67 2927.42 19906.01 2298.31 7341.37 5818.45 10431.03 17 E1_Ae KnownBoundary 1 12300.03 24241.67 7023.73 4398.77 5002.63 6006.03 5115.45 1675.08 737.29 2110.87 5773.83 158.15 222.55 1453.54 5320.12 4285.20 4693.31 2281.59 6755.77 1187.52 3743.09 2206.12 3831.18 18 E1_Da KnownBoundary 0 23.63 3.35 17.03 10.82 20.46 50.99 0.00 5.79 19.33 15.63 19.22 0.00 0.00 13.89 0.00 27.86 20.94 14.88 4.80 5.50 24.09 3.12 35.94 19 E1a_E2c KnownJunction 1 16636.28 33448.19 20575.18 11889.20 10790.24 10128.71 7705.33 4666.13 2088.38 5798.47 8962.90 480.76 908.71 2354.30 5869.72 5164.12 7218.13 4708.81 4860.85 1848.80 4126.17 2868.73 4472.86 20 E1a_E2d NovelJunction 0 125.65 153.39 312.59 151.83 47.03 78.36 73.44 41.61 26.74 99.44 29.74 0.00 0.00 31.55 4.45 44.18 61.80 166.44 105.60 22.50 8.59 2.69 68.03 21 ER1e ExonRegion 1 15651.38 33680.14 11229.76 6982.40 9806.61 9724.86 6984.39 2811.98 1271.70 3608.16 10011.93 439.44 678.30 2686.09 6575.33 6359.61 7502.94 3088.28 8015.17 1789.62 4703.82 3478.96 5504.37 22 ER1f ExonRegion 0 10.14 3.55 32.98 11.67 7.53 13.67 1.76 13.11 31.66 18.59 40.43 0.52 3.82 23.96 15.91 21.34 34.86 24.64 17.78 12.31 44.44 16.40 20.32 23 E1_Db KnownBoundary 0 3.63 0.00 40.27 15.48 0.00 0.00 0.00 31.50 32.18 34.03 57.12 5.70 6.82 48.68 37.46 50.67 80.60 75.28 30.21 26.01 70.43 55.23 66.67 24 E1b_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER1g ExonRegion 0 2.75 3.30 28.61 9.97 11.95 31.37 14.73 13.46 31.18 16.77 35.31 8.08 8.10 44.07 29.60 40.55 28.01 49.02 14.18 11.34 39.67 26.08 52.65 26 E1c_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER2a ExonRegion 0 41.57 12.46 40.87 13.43 18.27 29.40 15.24 18.68 45.00 38.01 65.50 23.50 24.39 73.00 35.76 57.13 41.92 42.02 23.58 19.55 59.99 40.56 42.62 28 E2_Ab KnownBoundary 0 78.31 49.93 70.02 7.62 58.23 52.19 35.29 20.66 55.41 28.21 50.33 34.81 56.17 84.00 50.31 75.88 51.05 46.93 35.77 29.47 84.02 57.99 50.11 29 ER2b ExonRegion 0 85.56 84.19 89.13 52.35 91.76 80.87 71.46 46.23 56.52 50.88 112.76 109.75 107.86 86.93 42.90 74.64 81.11 41.16 43.56 25.49 57.38 103.11 65.22 30 E2_Ac KnownBoundary 0 203.96 44.86 89.06 79.54 100.59 55.76 116.55 53.72 44.07 48.73 102.50 135.49 93.83 50.68 8.90 52.89 51.80 16.08 34.64 35.99 13.84 148.67 52.16 31 ER2c ExonRegion 0 5289.42 9729.17 11756.67 6354.84 3909.54 3391.57 2493.79 2705.36 1205.54 3438.29 5015.93 2674.10 1732.52 1190.50 2390.09 2239.30 3846.64 1832.06 2126.30 801.79 2500.76 2103.72 1530.03 32 E2_Da KnownBoundary 0 92.76 43.02 52.57 34.36 51.61 52.87 39.39 34.95 24.28 47.41 51.49 166.55 41.88 39.32 35.85 43.58 55.63 10.36 3.86 15.34 9.27 103.30 28.00 33 E2a_E2d KnownJunction 1 4315.36 3665.33 17453.05 7494.25 1961.12 1242.01 1135.69 3401.34 1513.90 4484.52 9351.37 5189.14 2685.54 1681.57 3024.67 1535.41 7526.50 1581.32 1846.74 901.49 6683.94 1474.50 862.59 34 ER2d ExonRegion 0 99.82 79.66 275.17 131.26 97.25 55.88 53.49 78.00 51.43 95.39 202.11 241.26 129.76 83.22 66.76 59.82 136.51 34.92 46.87 35.09 87.59 127.17 56.17 35 E2_Ad KnownBoundary 0 78.16 40.85 83.70 66.09 100.85 59.62 58.07 48.88 30.64 44.99 56.91 175.41 134.57 72.75 28.18 35.03 57.41 17.12 39.62 14.89 12.85 127.61 85.53 36 ER2e ExonRegion 0 4010.06 4235.91 19735.75 11525.43 4877.37 2831.54 1825.45 4988.29 2010.09 5903.76 13342.28 9417.98 7223.34 6619.03 10407.12 9776.64 9105.59 4828.88 16026.59 2456.53 6194.38 6580.71 8237.95 37 E2b_E3a KnownJunction 0 3.85 0.00 0.00 1.86 0.00 8.69 4.50 0.00 0.00 0.00 0.00 0.00 6.33 2.47 0.00 0.00 9.54 0.00 0.00 0.00 0.00 3.31 3.50 38 E2b_E4a KnownJunction 0 8204.86 8670.23 15370.24 9321.56 14356.29 9786.24 6704.03 4491.90 1769.69 4809.71 7708.64 10707.64 7338.64 5495.05 8564.09 5502.92 4876.95 4162.21 7159.17 1805.53 4906.30 5003.14 3772.37 39 ER3a ExonRegion 0 22.29 23.31 10.71 8.52 20.42 8.16 25.52 7.44 10.31 4.53 35.98 32.36 22.87 25.04 13.41 28.74 34.27 23.23 20.11 9.84 20.84 17.25 21.76 40 E3a_E4a KnownJunction 0 14.22 11.97 3.08 4.76 3.65 12.04 1.94 4.48 0.00 0.00 4.95 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 3.15 0.00 3.33 41 ER4a ExonRegion 0 12583.14 25789.61 16724.98 9175.68 9392.22 10916.42 7739.99 4761.45 1859.36 5452.23 10684.21 15505.88 7327.55 6229.36 8311.61 5359.21 7244.68 4418.53 7644.49 1839.03 7091.74 5314.64 4028.62 42 E4_Da NovelBoundary 0 15180.54 38140.71 17346.49 9034.78 4567.83 5009.22 3863.09 5018.39 2142.95 6073.25 13191.97 13478.89 8069.44 7358.62 9751.80 5043.63 9012.89 4298.14 8076.56 2189.42 9279.33 4986.37 3772.45 43 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 E4b_E5a KnownJunction 0 14622.30 27638.04 16933.55 9759.03 3388.20 3818.94 2957.18 4983.60 2053.65 5850.16 10095.40 15547.02 11363.22 8785.73 10775.72 5060.47 7799.80 4703.76 8090.68 2002.21 8652.17 5836.47 3586.10 45 ER4b ExonRegion 0 12402.71 28872.21 16552.83 8884.54 3516.96 4129.50 3042.00 4801.38 2010.67 5894.52 12130.13 14692.04 9901.02 8128.59 9747.87 4951.22 8526.85 4458.34 7960.96 1925.93 9379.16 5392.79 3607.67 46 ER5a ExonRegion 0 12194.52 20511.45 16340.13 9169.04 3212.50 3498.68 2717.68 4828.38 1893.51 5599.09 10340.02 13738.07 9967.15 9458.58 10976.08 6136.45 8052.21 4783.21 9565.72 2139.99 8540.50 6048.46 4353.28 47 E5_Ab KnownBoundary 0 16367.42 21218.66 14663.68 8581.09 4542.36 3705.42 3333.93 4509.77 1721.83 4993.80 10249.49 12216.23 8511.78 9443.80 12644.08 7146.84 8543.33 4550.92 11619.91 2449.50 8255.99 6684.31 4917.34 48 ER5b ExonRegion 0 13240.82 18981.70 20489.59 11423.00 3981.87 3625.37 2764.82 5860.25 2290.70 6558.12 12098.17 12713.42 6953.54 9823.20 12753.59 7464.29 9254.64 5987.71 11864.19 2357.50 8830.14 7096.92 5610.89 49 E5_Da KnownBoundary 0 16144.19 23023.73 21876.67 12780.53 4941.85 4538.01 3356.37 5862.58 2359.73 6465.32 13252.72 13866.32 7249.85 10420.91 14566.57 8072.07 10189.42 5814.87 13720.77 2771.70 9753.22 8279.50 6559.22 50 ER5c ExonRegion 0 10688.87 15981.95 22119.02 12111.09 4877.37 5558.49 4749.62 6185.18 2354.52 6988.56 12018.63 14127.62 5791.06 9355.83 12138.35 7166.91 9743.21 4975.70 10403.24 2382.20 9368.76 7111.93 5468.98 51 E5_Db KnownBoundary 0 11495.44 13377.22 22523.13 11943.27 8650.43 7692.50 7354.28 6243.21 2364.39 7093.03 10629.11 11090.41 4663.01 8948.48 11807.31 6714.82 9256.00 5545.80 9985.13 2470.27 8282.31 6539.92 5013.38 52 ER5d ExonRegion 0 9927.13 11731.93 22535.54 11988.22 8052.24 6038.65 4940.54 5997.01 2347.14 6980.51 11011.57 7752.82 5283.32 8276.26 11954.92 6369.42 9149.39 4788.10 9810.67 2395.06 8109.65 6734.76 4782.86 53 E5c_E6b KnownJunction 0 12528.81 14266.93 26981.34 15115.56 10290.92 6276.33 4851.32 7084.45 2727.17 7745.51 11890.12 6370.03 7613.95 8801.44 14796.50 7004.91 9467.40 5631.98 11081.35 2827.12 7899.66 7487.39 5292.09 54 ER5e ExonRegion 0 3.60 1.42 5.02 2.45 1.61 0.73 0.40 2.77 1.98 4.13 2.90 0.00 8.91 0.97 0.00 10.40 0.99 2.22 0.96 1.49 6.83 1.88 0.00 55 ER6a ExonRegion 0 54.44 42.19 88.03 31.95 43.31 15.82 29.35 33.92 32.32 28.47 67.16 57.40 40.43 28.96 30.37 33.78 46.29 22.34 28.46 12.31 20.07 41.29 22.42 56 E6_Ab KnownBoundary 0 106.98 13.02 85.80 17.68 56.88 4.88 28.97 41.73 37.15 28.61 64.33 68.87 35.55 33.79 19.04 23.67 34.13 24.42 18.26 18.47 14.33 29.51 23.65 57 ER6b ExonRegion 0 8465.92 11574.81 27937.59 14908.57 5695.47 5131.00 3800.02 7369.11 2788.32 7875.70 12389.23 8895.49 8200.67 8282.27 12535.82 7329.51 9470.77 4547.72 11723.87 2479.30 5721.43 7138.31 5170.93 58 E6a_E7a KnownJunction 0 4499.91 6212.05 23729.15 11281.22 4785.49 3453.92 2796.91 6567.45 2526.39 6828.42 6966.50 6228.08 3803.48 3493.34 9250.04 3582.65 4826.08 2204.86 5310.93 1673.61 2765.71 4733.10 2629.01 59 ER7a ExonRegion 0 11488.31 14527.57 22968.27 13112.29 5502.36 4794.35 4369.76 5908.50 2214.67 6314.88 8612.98 8208.67 7366.20 6047.07 10638.08 6033.25 8604.43 2178.02 11029.59 1760.26 4072.03 6413.92 4172.08 60 E7a_E8a KnownJunction 1 10751.16 14893.79 25930.49 16382.00 4847.20 3307.13 3121.33 6138.35 2264.88 6134.95 6959.08 9828.65 9473.40 6992.03 13232.37 6577.16 8041.79 1657.64 13990.43 1796.71 3085.96 8052.45 4258.42 61 ER8a ExonRegion 0 3634.78 6587.29 14502.59 7612.57 2443.04 1647.07 1338.39 3659.83 1414.77 3895.29 4759.30 7781.12 4419.51 2809.36 5246.33 2609.89 4335.00 1257.86 5010.48 958.91 2952.02 4759.87 1768.31 62 E8_Da KnownBoundary 1 6156.13 9365.57 16308.32 11323.37 3955.35 1923.44 1904.38 3255.41 1390.93 3233.88 2724.58 9407.47 4222.61 2752.62 7868.86 2381.26 2989.90 1845.38 3704.01 591.62 2443.54 2479.83 1658.09 63 ER8b ExonRegion 1 13149.06 12174.83 8951.58 6911.68 7003.88 2778.45 2463.58 1535.01 688.78 1496.77 3405.34 6384.64 3472.37 3108.54 6061.11 3446.71 3124.72 1308.02 6632.90 576.85 2250.62 2798.24 2666.82 64 ER8c ExonRegion 0 1356.69 1331.99 480.96 699.16 746.53 302.58 252.88 162.47 72.25 143.36 311.20 502.22 220.43 328.07 549.79 312.07 277.28 117.33 673.70 73.40 228.08 150.01 259.89 65 ER8d ExonRegion 0 91.01 217.59 47.79 44.98 85.62 31.17 50.31 29.38 14.82 22.94 56.05 64.94 28.14 71.46 40.62 47.55 46.21 7.39 41.41 10.64 35.26 20.84 52.86