Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GBP1 Gene 0 128.73 2.05 20.59 15.55 61.44 40.63 16.88 71.01 122.43 14.34 106.04 235.74 83.87 304.18 90.63 438.68 134.88 0.08 0.10 0.13 97.21 78.82 32.64 2 370473 Transcript 0 87.30 1.89 20.28 14.07 66.83 61.39 21.34 61.73 135.37 17.75 187.34 285.99 118.52 557.32 118.36 835.86 253.89 0.00 0.00 0.00 190.27 57.81 44.02 3 469194 Transcript 0 1.92 0.02 0.20 0.31 0.43 0.00 1.03 0.46 3.92 0.22 0.88 2.88 0.00 0.17 0.31 2.25 0.74 0.00 0.00 0.00 8.41 4.07 3.89 4 422952 Transcript 0 1.75 0.00 0.00 0.00 2.11 0.10 0.13 1.01 0.33 0.31 0.56 0.91 0.65 1.97 0.58 0.91 0.57 0.00 0.00 0.00 0.80 0.27 0.16 5 493139 Transcript 0 17.79 0.01 1.86 2.77 6.29 0.78 1.15 8.26 18.32 0.54 9.21 36.22 9.81 27.87 6.66 62.90 19.18 0.00 0.00 0.79 14.39 20.20 21.38 6 459831 Transcript 0 52.80 0.83 2.61 3.48 23.69 7.48 5.71 13.11 40.45 4.25 13.22 72.17 26.14 37.44 10.62 51.20 14.59 0.00 0.00 0.43 18.78 56.13 12.45 7 495131 Transcript 0 59.07 0.23 2.14 3.65 19.14 12.55 7.46 16.03 40.87 1.97 10.26 31.94 13.02 32.60 7.81 59.08 9.53 0.31 0.00 0.24 32.49 108.65 32.07 8 468959 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 479889 Transcript 0 18.25 0.00 0.66 2.91 1.23 0.00 3.18 0.28 2.80 1.77 1.62 9.83 0.00 12.86 1.25 10.60 0.00 0.00 0.00 0.00 13.40 20.22 6.67 10 484970 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 IG6_AR3 ActiveIntergenicRegion 0 15.39 0.68 2.24 0.69 6.34 1.87 2.07 2.10 4.76 0.58 0.92 2.57 2.10 1.39 3.38 4.65 2.25 0.00 0.00 0.00 0.00 0.28 0.20 12 ER1a ExonRegion 1 97.26 1.77 2.45 4.09 46.41 34.23 14.56 13.21 21.07 1.57 142.36 28.92 11.35 336.19 61.35 510.25 172.18 0.00 0.00 0.00 55.24 16.41 10.72 13 E1_Ab KnownBoundary 0 132.69 2.76 6.45 8.86 80.65 95.63 26.23 32.04 65.51 4.24 130.30 180.21 64.28 329.39 57.73 1048.78 211.13 0.00 0.00 0.00 165.32 36.68 27.32 14 ER1b ExonRegion 1 79.73 1.13 4.64 12.58 40.90 59.73 15.09 36.84 128.43 7.57 92.70 72.55 19.63 144.71 34.48 547.51 176.08 0.00 0.00 0.00 260.10 87.36 49.25 15 E1a_E2a KnownJunction 0 88.46 0.00 2.57 19.98 39.56 79.05 6.49 56.44 222.28 8.19 124.77 99.33 38.47 186.18 43.14 307.36 310.05 0.00 0.00 0.00 224.19 100.55 102.52 16 E2_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 3.15 2.88 12.21 17 E2_Ab NovelBoundary 1 18.97 0.00 4.08 11.25 6.11 6.53 2.08 47.32 132.15 4.86 212.26 131.59 37.34 253.17 33.99 165.26 311.08 0.00 0.00 0.00 126.58 45.07 49.85 18 ER2a ExonRegion 1 45.19 0.00 4.29 14.11 18.33 47.50 4.44 54.53 188.29 9.58 178.79 138.33 33.53 252.47 47.73 272.99 329.10 0.00 0.00 0.00 189.30 76.67 82.52 19 ER2b ExonRegion 0 24.23 0.99 10.65 15.26 26.18 19.81 10.12 59.14 159.85 13.00 152.19 184.90 48.78 478.55 109.59 721.24 262.11 0.00 0.00 0.00 223.36 76.87 42.32 20 E2_Da KnownBoundary 0 122.98 13.75 32.97 30.23 92.44 27.77 36.92 62.68 145.54 16.79 52.70 184.71 60.22 308.67 96.92 470.39 282.56 0.00 0.00 0.00 119.72 67.05 60.18 21 E2_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.49 0.00 12.29 22 E2b_E5a KnownJunction 0 35.71 0.00 13.66 5.26 74.62 66.67 24.02 70.73 163.11 22.59 156.67 265.59 74.51 464.24 131.03 678.80 274.05 0.00 0.00 0.00 212.39 70.05 49.77 23 ER2c ExonRegion 0 21.52 2.03 17.46 6.02 84.51 55.32 28.24 65.11 170.24 21.03 140.14 263.38 94.19 460.84 129.83 655.85 281.13 0.00 0.00 0.00 221.29 71.01 72.44 24 ER2d ExonRegion 0 1.92 0.02 0.20 0.31 0.43 0.00 1.03 0.46 3.92 0.22 0.88 2.88 0.00 0.17 0.31 2.25 0.74 0.00 0.00 0.00 8.41 4.07 3.89 25 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER4a ExonRegion 0 1.06 0.00 0.00 0.00 0.00 0.00 0.00 1.44 0.00 0.19 2.58 0.00 2.35 5.14 0.97 5.45 2.75 0.00 0.00 0.00 4.77 0.35 0.00 29 ER5a ExonRegion 0 56.62 0.00 13.07 6.93 62.66 86.19 20.69 50.13 155.06 20.45 256.31 284.30 90.58 507.54 122.64 761.67 260.01 0.00 0.00 0.00 220.74 70.23 50.41 30 E5_Ab KnownBoundary 1 205.89 0.00 40.63 37.22 85.82 154.91 33.74 85.72 240.42 35.65 391.05 237.98 67.37 573.14 85.67 978.80 384.01 0.00 0.00 0.00 270.40 109.55 62.91 31 ER5b ExonRegion 1 89.24 3.81 15.26 6.34 29.30 58.89 16.28 55.85 125.52 12.52 189.38 185.46 45.20 500.88 102.31 586.88 223.76 0.00 0.00 0.00 207.84 72.66 35.17 32 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 I5 Intron 0 28.15 0.00 0.84 0.75 5.40 0.00 1.58 2.60 3.04 0.47 0.00 2.76 0.71 0.79 1.49 4.08 0.00 0.00 0.00 0.00 2.83 2.87 4.58 34 I5_SR1 SilentIntronRegion 0 29.46 0.00 0.88 0.78 5.68 0.00 1.62 2.74 3.20 0.46 0.00 2.88 0.75 0.83 1.57 4.15 0.00 0.00 0.00 0.00 2.97 2.92 4.77 35 ER6a ExonRegion 0 108.77 2.97 22.31 12.63 24.97 41.67 10.57 83.13 168.64 12.74 191.01 254.36 135.16 650.50 147.04 907.41 246.28 0.00 0.00 0.00 270.54 91.99 36.18 36 E6_Ab KnownBoundary 1 63.72 0.00 2.99 0.00 8.49 31.00 0.00 24.85 48.35 4.27 64.65 67.82 26.62 169.64 15.20 418.10 87.89 0.00 0.00 0.00 125.16 25.47 8.11 37 E6_Da KnownBoundary 0 58.08 2.83 15.02 18.58 48.39 18.40 5.79 39.06 77.52 8.81 56.80 36.31 19.15 122.55 21.88 417.33 112.95 0.00 0.00 0.00 124.11 74.64 14.51 38 E6a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER6b ExonRegion 0 111.28 0.32 28.12 15.74 64.01 34.46 9.86 81.56 187.02 12.25 194.31 220.01 120.83 683.07 137.73 1047.21 258.34 0.00 0.00 0.00 244.09 111.69 44.05 40 E6_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E6b_E6c KnownJunction 1 67.12 0.00 16.00 15.05 20.63 22.26 0.00 58.00 133.33 13.48 104.55 149.00 88.63 282.65 18.91 639.40 134.92 0.00 0.00 0.00 127.01 56.46 15.11 42 ER6c ExonRegion 0 17.79 0.01 1.86 2.77 6.29 0.78 1.15 8.26 18.32 0.54 9.21 36.22 9.81 27.87 6.66 62.90 19.18 0.00 0.00 0.79 14.39 20.20 21.38 43 E6_Ac KnownBoundary 0 7.48 0.00 0.00 0.00 0.00 0.00 0.00 6.78 15.05 1.67 6.90 13.65 0.00 9.59 0.00 28.80 13.93 0.00 0.00 0.00 11.49 0.00 15.96 44 ER6d ExonRegion 0 89.69 2.65 21.87 18.36 60.63 32.63 12.52 96.73 200.28 18.65 254.89 367.43 181.76 693.59 124.10 1224.68 265.19 0.00 0.00 0.00 252.39 103.74 68.87 45 E6_Dc KnownBoundary 0 101.57 3.35 29.80 35.79 86.08 59.34 32.55 141.01 249.74 30.76 253.54 548.58 217.52 754.85 192.35 1345.29 312.48 0.00 0.00 0.00 399.27 212.17 121.90 46 ER6e ExonRegion 0 76.39 2.51 24.81 22.27 57.29 49.98 12.83 102.16 209.36 18.89 271.33 339.96 174.60 737.34 145.45 1144.39 315.93 0.00 0.00 0.00 286.44 114.41 66.54 47 E6_Dd KnownBoundary 0 36.75 0.00 0.00 3.06 22.75 5.79 4.02 19.02 33.25 1.45 9.84 56.57 21.59 34.79 29.05 63.91 17.39 0.00 0.00 0.00 40.83 59.09 8.11 48 E6d_E7a KnownJunction 1 73.64 0.00 27.70 18.55 50.17 61.56 14.97 78.62 174.74 20.23 225.11 344.36 230.67 755.73 109.77 1508.07 338.48 0.00 0.00 0.00 278.12 67.79 48.74 49 ER6f ExonRegion 1 52.80 0.83 2.61 3.48 23.69 7.48 5.71 13.11 40.45 4.25 13.22 72.17 26.14 37.44 10.62 51.20 14.59 0.00 0.00 0.43 18.78 56.13 12.45 50 E6_De NovelBoundary 0 92.31 0.00 1.60 5.06 43.38 0.00 12.63 47.56 67.79 9.21 16.27 72.17 26.62 59.80 19.53 86.73 8.23 0.00 0.00 0.00 17.11 106.49 3.50 51 E7_Aa NovelBoundary 0 124.69 0.00 2.72 9.36 23.09 8.01 12.59 42.10 42.91 4.62 10.37 91.23 33.11 56.51 10.75 77.76 18.70 0.00 0.00 0.00 20.39 133.00 50.96 52 ER7a ExonRegion 0 107.39 4.18 28.21 19.61 71.61 63.11 20.68 87.77 160.07 18.25 234.06 398.31 189.69 710.17 112.04 956.62 274.88 0.00 0.00 0.00 226.86 77.62 58.91 53 E7a_E8a KnownJunction 0 148.03 5.79 33.47 24.71 89.98 75.13 40.94 72.74 126.94 24.69 158.62 418.49 101.62 665.67 180.73 745.02 229.64 0.00 0.00 0.00 164.95 50.95 49.00 54 E8_Aa NovelBoundary 0 7.56 0.00 0.00 3.93 0.00 0.00 0.00 6.20 8.22 3.81 7.42 6.30 0.00 7.48 4.45 4.36 0.00 0.00 0.00 0.00 8.59 13.47 16.48 55 ER8a ExonRegion 0 92.47 1.49 23.42 19.34 72.39 42.83 13.50 58.88 146.58 16.46 138.22 261.93 131.27 461.66 110.96 690.62 228.02 0.00 0.00 0.00 173.60 51.60 40.59 56 E8_Ab KnownBoundary 0 668.04 0.00 37.73 76.71 228.01 145.54 59.93 202.70 332.75 47.36 177.36 317.05 186.03 697.69 273.19 1386.47 548.39 0.00 0.00 0.00 436.70 170.35 109.86 57 ER8b ExonRegion 0 86.25 4.44 17.08 11.34 59.84 57.06 18.03 72.83 170.35 13.30 145.90 207.36 94.84 483.27 90.16 635.12 204.78 0.00 0.00 0.00 189.96 50.71 39.39 58 E8_Ac KnownBoundary 0 561.88 11.51 46.60 67.22 182.43 152.19 67.52 206.85 371.70 45.80 131.66 289.89 147.23 707.52 371.96 1273.94 504.63 0.00 0.00 0.00 292.76 146.29 90.57 59 ER8c ExonRegion 0 110.52 1.57 18.59 10.64 83.99 69.71 19.49 94.89 224.41 18.73 164.81 144.17 98.01 521.88 113.02 737.94 226.32 0.00 0.00 0.00 197.93 58.60 52.89 60 E8_Da NovelBoundary 0 0.00 0.00 0.00 0.00 4.33 0.00 0.00 8.87 12.64 0.00 0.00 25.51 0.00 19.66 0.00 0.00 0.00 0.00 0.00 0.00 11.80 30.56 4.10 61 E8a_E9a KnownJunction 0 117.43 0.00 23.59 5.49 92.44 74.39 44.21 82.39 158.85 13.24 104.76 137.29 93.83 474.13 74.42 635.13 224.40 0.00 0.00 0.00 137.27 26.82 32.18 62 I8 Intron 0 11.43 0.00 0.73 1.02 4.28 4.40 3.18 3.86 9.58 0.68 6.96 16.56 3.86 17.12 3.11 18.43 7.59 0.00 0.00 0.00 9.69 41.47 14.10 63 I8_AR1 ActiveIntronRegion 0 11.31 0.00 0.57 1.02 5.30 5.02 2.80 3.87 9.98 0.64 7.66 18.01 3.41 17.89 2.59 19.25 7.61 0.00 0.00 0.00 9.03 44.57 15.99 64 I8_SR1 SilentIntronRegion 0 12.11 0.00 1.40 1.03 0.26 1.98 4.77 3.90 8.14 0.86 4.27 11.06 5.76 14.38 5.23 15.45 7.68 0.00 0.00 0.00 12.52 29.77 6.75 65 E9_Aa NovelBoundary 0 42.53 0.00 0.00 0.00 0.00 13.63 8.08 2.42 9.78 0.00 0.00 6.30 6.82 19.42 4.45 28.54 13.93 0.00 0.00 0.00 11.68 15.92 19.89 66 ER9a ExonRegion 0 193.75 3.82 30.93 14.79 75.61 63.10 21.73 97.69 190.16 18.38 142.00 230.58 119.02 544.96 102.74 675.30 208.05 0.00 0.00 0.00 152.76 78.51 43.06 67 E9_Ab KnownBoundary 1 358.66 6.71 53.90 18.38 72.07 117.09 35.46 124.37 161.80 20.95 174.52 298.60 301.93 666.20 136.47 729.38 245.25 0.00 0.00 0.00 184.41 121.49 45.33 68 ER9b ExonRegion 0 357.64 4.40 46.36 21.71 88.80 77.28 33.47 121.31 178.75 26.54 199.54 337.50 159.13 719.52 144.93 811.32 263.00 0.00 0.00 0.00 158.36 134.02 43.57 69 E9_Da KnownBoundary 0 88.39 0.00 5.23 2.06 4.33 0.00 10.64 4.64 20.46 0.00 7.42 37.21 0.00 16.89 4.45 46.74 17.11 0.00 0.00 0.00 22.92 83.52 22.79 70 E9a_E10c KnownJunction 0 315.69 2.57 31.55 19.41 65.45 37.31 22.83 110.45 135.91 24.93 155.57 220.42 36.04 479.78 95.93 616.08 198.69 0.00 0.00 0.00 86.43 30.13 7.51 71 ER9c ExonRegion 0 59.07 0.23 2.14 3.65 19.14 12.55 7.46 16.03 40.87 1.97 10.26 31.94 13.02 32.60 7.81 59.08 9.53 0.31 0.00 0.24 32.49 108.65 32.07 72 E9_Db NovelBoundary 0 47.05 0.00 2.84 2.06 0.00 4.83 4.24 12.73 24.16 4.67 2.68 44.71 14.61 19.78 14.09 49.05 4.39 0.00 0.00 0.00 47.82 39.25 18.95 73 E10_Aa NovelBoundary 0 81.20 0.00 12.00 5.63 35.40 2.67 6.32 9.73 22.60 0.00 7.16 18.91 19.48 22.72 26.08 34.61 13.28 0.00 0.00 0.00 44.36 45.19 26.72 74 ER10a ExonRegion 0 18.25 0.00 0.66 2.91 1.23 0.00 3.18 0.28 2.80 1.77 1.62 9.83 0.00 12.86 1.25 10.60 0.00 0.00 0.00 0.00 13.40 20.22 6.67 75 E10_Ab KnownBoundary 0 64.46 0.00 6.77 4.03 3.31 2.56 8.35 7.11 19.85 4.75 2.68 25.21 0.00 29.61 4.45 42.21 4.02 0.00 0.00 0.00 34.66 46.97 16.65 76 ER10b ExonRegion 0 75.14 0.03 2.09 4.16 17.18 6.24 7.55 7.00 25.43 4.21 9.47 46.77 7.30 38.35 8.80 42.79 15.77 0.00 0.00 0.64 41.57 49.28 26.83 77 E10_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78 ER10c ExonRegion 0 251.01 3.19 37.49 27.16 130.80 69.45 44.68 120.47 197.93 30.72 174.19 429.55 158.77 433.78 130.90 637.49 239.35 0.49 0.00 0.27 148.73 75.95 38.87 79 E10_Da KnownBoundary 0 30.30 0.00 6.68 4.43 8.49 9.82 9.01 8.46 28.62 1.37 2.21 18.91 6.82 14.48 9.64 44.35 14.03 2.11 0.00 0.00 21.62 160.37 57.53 80 E10a_E10d KnownJunction 0 265.68 2.83 41.04 29.33 258.83 117.03 61.52 113.08 207.58 25.17 179.20 628.10 111.36 747.31 263.18 937.53 291.72 0.00 0.00 0.00 171.37 49.35 31.84 81 ER10d ExonRegion 0 62.17 1.74 3.89 3.38 17.71 5.58 6.89 16.59 32.98 3.52 7.20 22.21 3.51 19.34 6.98 41.19 6.78 0.58 0.00 0.00 36.23 96.95 20.46 82 E10_Ad KnownBoundary 0 40.67 0.00 0.00 0.00 4.24 4.54 4.20 6.28 15.57 4.75 2.68 11.70 0.00 26.61 4.45 27.34 9.54 0.00 0.00 0.00 40.40 53.03 14.94 83 ER10e ExonRegion 0 194.38 3.01 43.68 28.99 108.89 83.76 33.58 135.68 222.70 29.30 192.23 580.89 219.46 678.33 233.78 1157.54 314.65 0.00 0.00 0.00 181.14 130.45 70.77 84 E10b_E11a KnownJunction 0 347.25 2.70 46.04 22.91 166.64 58.43 66.42 147.41 235.91 23.02 212.79 591.04 242.03 763.97 341.93 756.98 391.58 0.00 0.00 0.00 188.79 159.21 76.91 85 ER11a ExonRegion 0 268.86 2.35 36.07 27.39 112.63 58.97 44.68 145.51 215.14 21.18 214.85 510.47 178.07 641.58 239.90 718.51 345.25 0.00 0.00 0.00 172.30 133.67 54.05 86 E11_Da KnownBoundary 0 331.47 7.63 37.43 37.52 103.48 85.58 47.70 168.03 231.62 20.84 224.06 523.52 184.57 619.93 214.23 716.91 353.81 0.00 0.00 0.00 163.15 117.75 48.40 87 ER11b ExonRegion 0 500.57 5.50 38.12 44.08 138.89 83.35 43.20 166.48 252.82 27.45 227.21 635.74 207.55 641.22 213.11 1101.55 325.16 0.00 0.00 0.00 146.44 149.57 60.46 88 E11_Db KnownBoundary 0 1049.52 5.85 59.90 61.06 209.08 140.32 73.58 208.29 310.91 26.03 315.45 742.29 274.49 772.74 267.51 2793.97 507.90 0.00 0.00 0.00 238.65 297.23 126.25 89 ER11c ExonRegion 0 546.78 5.31 49.33 39.94 161.80 104.94 52.15 158.71 292.86 24.97 234.25 702.56 250.31 619.86 250.82 1217.95 297.24 0.00 0.00 0.00 127.28 132.07 82.46 90 E11_Dc KnownBoundary 1 744.21 15.06 43.46 40.02 328.01 119.59 65.23 167.62 312.27 42.01 195.21 877.34 238.46 567.49 299.15 747.24 274.15 0.00 0.00 0.00 77.53 163.00 85.88 91 ER11d ExonRegion 0 260.82 3.52 49.01 34.78 132.96 74.24 30.60 155.32 200.87 30.90 132.60 473.87 129.79 331.85 175.94 407.76 133.99 0.10 0.50 0.00 44.81 107.26 25.12 92 ER11e ExonRegion 0 9.45 0.00 0.00 0.00 12.67 0.61 0.79 4.61 1.98 1.68 0.77 5.48 1.56 5.85 2.51 0.00 0.66 0.00 0.00 0.00 0.00 1.25 0.98 93 IG5_AR1 ActiveIntergenicRegion 0 12.20 0.00 1.46 5.04 3.90 2.40 1.76 3.67 12.58 0.60 2.98 16.22 2.39 7.24 1.93 6.20 4.15 0.00 0.00 0.34 1.77 7.64 4.64