Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CTH Gene 0 6.80 8.88 7.39 8.57 11.95 11.73 8.22 6.82 5.10 7.17 13.66 130.20 411.92 40.65 56.52 24.20 66.89 6.65 22.27 8.50 10.65 45.64 20.97 2 464926 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 411986 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 370938 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 346806 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.64 0.00 8.90 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 6 482383 Transcript 1 22.36 17.55 2.00 4.44 20.11 17.24 26.03 1.94 0.37 1.66 8.88 37.53 55.29 26.45 30.08 28.16 23.06 5.35 23.69 32.67 13.56 20.16 30.63 7 ER1a ExonRegion 0 0.00 1.53 2.08 4.16 4.49 5.67 4.46 3.52 2.18 3.29 7.02 20.02 73.45 15.75 18.73 13.96 36.19 3.96 21.22 0.97 8.72 15.79 16.86 8 E1_Ab KnownBoundary 0 0.00 3.29 3.96 3.26 7.64 9.54 6.89 0.00 6.42 1.16 2.53 86.28 233.75 21.48 22.62 3.93 27.30 0.00 12.33 0.00 22.55 9.06 4.35 9 ER1b ExonRegion 1 1.62 2.66 3.15 5.96 1.83 8.66 2.99 3.60 3.94 6.52 10.77 19.22 52.15 32.00 39.59 18.71 61.59 10.62 23.70 2.71 14.05 28.02 19.97 10 E1a_E2a KnownJunction 1 0.00 9.60 1.57 4.13 4.24 24.76 9.49 6.45 0.00 3.95 4.90 18.01 47.89 21.31 40.05 8.03 43.76 6.34 15.15 0.00 8.15 14.76 15.28 11 E2_Aa NovelBoundary 0 0.00 3.35 4.79 1.70 0.00 0.00 2.25 0.00 1.42 2.95 7.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.77 12 ER2a ExonRegion 0 0.08 11.04 3.24 4.37 11.55 16.19 12.17 5.61 2.85 6.17 10.89 54.17 195.67 35.73 32.09 11.96 60.99 5.07 8.97 1.79 9.86 31.91 13.43 13 E2_Da NovelBoundary 0 15.78 0.00 6.12 6.83 10.70 0.00 16.43 12.03 3.99 4.03 0.00 31.21 18.99 7.42 9.64 4.27 17.02 5.55 4.33 17.19 0.00 5.69 7.17 14 E2a_E3a KnownJunction 0 0.00 3.35 11.32 12.65 3.99 2.90 0.00 0.00 9.37 8.22 9.58 146.75 519.61 32.67 39.68 37.68 80.22 21.76 13.93 5.50 17.17 57.19 41.57 15 E2a_E4a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.49 0.00 0.00 0.00 0.00 2.33 0.00 16 E3_Aa NovelBoundary 0 0.00 0.00 14.78 0.00 0.00 0.00 0.00 8.87 0.00 0.00 2.53 6.30 13.64 0.00 0.00 4.36 8.23 0.00 0.00 3.13 0.00 0.00 0.00 17 ER3a ExonRegion 0 1.21 2.99 12.82 14.49 0.98 5.71 4.29 6.55 8.50 11.67 26.86 139.35 523.04 50.99 67.85 54.67 104.84 8.47 36.96 11.59 11.80 77.00 44.29 18 E3a_E4a KnownJunction 1 2.82 2.96 3.61 12.39 0.00 13.69 6.76 7.89 4.48 16.95 39.22 199.87 938.74 47.03 58.10 18.11 154.28 0.00 18.82 5.05 14.52 54.87 11.95 19 ER4a ExonRegion 0 3.73 9.96 15.54 12.46 10.46 12.04 6.10 6.10 8.52 14.83 21.98 216.36 842.41 53.09 61.30 43.18 131.11 4.03 32.78 10.39 8.69 72.66 26.06 20 E4a_E5a KnownJunction 0 14.22 19.01 18.18 25.97 29.54 39.75 30.03 11.01 13.77 24.10 33.27 397.93 1522.14 98.65 173.44 129.71 246.47 15.34 87.63 19.37 15.51 141.88 118.74 21 E4a_E6a KnownJunction 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.64 0.00 8.90 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 22 E5_Aa NovelBoundary 0 10.67 3.22 0.00 2.00 4.24 0.00 2.25 0.00 1.48 4.24 0.00 18.91 59.57 7.95 10.51 4.36 17.58 0.00 4.52 6.14 0.00 36.99 4.35 23 ER5a ExonRegion 1 5.23 10.43 9.01 11.71 13.38 15.67 5.39 7.86 8.21 8.87 14.41 242.15 847.76 58.65 60.97 30.96 103.75 5.92 28.81 8.62 9.10 61.31 24.56 24 E5a_E6a KnownJunction 0 13.48 0.00 7.54 3.60 7.05 5.39 7.07 7.43 7.06 9.75 14.74 300.70 861.31 55.45 53.40 19.14 111.73 4.52 12.42 3.07 15.07 40.35 17.16 25 ER6a ExonRegion 1 6.97 8.31 8.30 3.81 11.99 5.12 4.34 10.97 6.03 6.62 16.63 281.94 906.31 53.37 82.39 21.68 98.40 7.30 19.39 2.27 9.57 41.20 14.38 26 E6a_E7a KnownJunction 0 7.56 2.83 9.20 6.69 16.38 5.34 8.57 10.31 2.86 4.49 12.42 304.15 958.05 72.81 63.79 28.03 64.70 9.37 28.71 2.81 5.75 59.21 23.47 27 ER7a ExonRegion 0 1.28 2.74 6.74 6.87 17.50 17.37 5.75 6.89 7.55 6.69 18.16 263.65 889.36 61.15 69.07 26.71 75.92 5.99 20.30 7.42 11.44 58.66 18.18 28 E7a_E8a KnownJunction 0 0.00 6.18 6.30 2.06 8.66 17.38 5.65 12.08 3.91 5.53 34.80 224.17 1001.07 42.44 77.01 14.87 67.60 0.00 16.28 6.52 15.01 40.29 19.12 29 ER8a ExonRegion 0 5.60 12.93 6.25 7.24 3.69 11.42 8.79 6.90 5.71 5.13 17.84 207.96 744.43 56.45 73.18 20.11 82.89 6.11 27.27 6.52 11.06 51.24 17.66 30 E8a_E9a KnownJunction 0 0.00 6.38 6.77 11.75 4.07 8.18 10.55 6.12 6.66 4.11 22.80 167.60 863.90 70.46 84.80 28.37 64.61 2.57 33.98 8.31 8.96 67.66 18.87 31 ER9a ExonRegion 0 7.49 8.58 5.08 9.56 20.97 10.76 8.39 9.28 8.14 4.91 17.43 166.47 735.30 62.24 87.25 25.46 101.68 10.22 23.52 5.77 13.11 46.76 30.09 32 E9_Da NovelBoundary 0 0.00 0.00 8.57 1.43 7.56 16.81 0.00 0.00 1.19 1.45 0.00 5.25 0.00 2.47 11.37 0.00 8.88 0.00 0.00 0.00 4.94 28.47 0.00 33 E9a_E10b KnownJunction 0 6.82 0.00 9.46 5.09 28.95 20.67 8.35 8.13 10.50 5.24 21.64 186.21 408.25 61.04 93.58 19.40 108.84 6.05 18.64 2.43 12.05 18.68 22.79 34 I9 Intron 0 1.02 1.48 1.90 1.30 2.14 3.38 1.80 0.41 1.03 0.82 0.62 11.91 24.66 1.68 2.81 1.19 2.64 0.30 2.30 0.51 1.59 13.18 3.99 35 I9_SR1 SilentIntronRegion 0 1.02 1.48 1.90 1.30 2.15 3.38 1.80 0.41 1.04 0.82 0.62 11.93 24.70 1.69 2.82 1.19 2.65 0.30 2.30 0.51 1.59 13.20 4.00 36 E10_Aa NovelBoundary 0 58.97 37.49 54.08 41.89 60.61 18.17 48.62 61.32 90.94 48.30 93.34 19.36 21.26 10.77 32.88 91.00 78.26 71.22 54.21 46.34 65.48 45.25 51.56 37 ER10a ExonRegion 1 22.36 17.55 2.00 4.44 20.11 17.24 26.03 1.94 0.37 1.66 8.88 37.53 55.29 26.45 30.08 28.16 23.06 5.35 23.69 32.67 13.56 20.16 30.63 38 E10_Ab KnownBoundary 0 0.00 5.79 3.49 7.52 4.33 7.27 4.33 0.00 0.00 2.63 2.68 24.31 40.42 2.47 6.43 0.00 0.00 0.00 0.00 6.46 0.00 24.86 0.00 39 ER10b ExonRegion 0 9.52 3.48 18.07 13.55 15.44 17.24 5.02 5.19 7.34 6.29 18.73 125.97 467.02 49.72 97.25 29.21 92.49 15.14 26.28 3.40 13.73 66.55 24.28 40 E10a_E11a KnownJunction 0 13.04 3.09 15.61 18.05 3.82 5.34 0.00 11.38 1.59 5.00 17.53 174.66 534.87 60.80 134.74 36.74 97.62 17.00 44.71 3.20 13.53 65.09 31.33 41 ER11a ExonRegion 0 6.43 7.20 12.52 9.82 11.15 16.29 7.31 15.13 3.94 6.06 19.20 150.85 442.58 60.02 104.03 33.21 97.06 15.73 32.29 3.75 20.82 50.38 26.45 42 E11a_E12a KnownJunction 0 10.15 9.21 20.37 14.78 20.46 10.22 6.36 15.61 1.79 10.13 17.90 159.65 352.09 50.03 47.84 33.84 43.29 11.86 30.97 0.00 19.58 51.31 19.29 43 ER12a ExonRegion 0 8.63 8.04 14.73 12.40 24.98 16.98 3.60 12.91 5.55 13.97 20.70 176.38 433.29 46.15 92.42 28.06 68.11 8.28 31.06 2.78 16.15 50.12 20.30 44 E12_Da KnownBoundary 1 11.26 2.43 9.52 1.47 3.74 8.69 2.21 6.70 1.79 12.76 12.16 112.54 189.11 40.91 100.38 24.52 33.94 2.57 19.20 2.81 14.58 45.93 12.72 45 E12_Db KnownBoundary 0 18.08 14.80 11.62 10.35 0.00 8.23 11.04 6.74 4.83 12.41 7.53 133.39 311.34 38.44 63.54 7.95 47.87 7.09 0.00 9.40 0.00 55.60 11.18 46 ER12b ExonRegion 0 16.18 6.46 12.95 7.69 3.15 10.02 5.30 9.20 4.37 16.14 13.46 128.65 231.65 46.69 78.54 19.42 42.79 7.06 12.63 5.24 11.02 60.94 11.33 47 ER12c ExonRegion 0 4.24 9.92 7.13 10.87 12.63 6.23 3.46 7.14 5.85 8.85 5.36 125.18 263.52 19.38 35.44 9.15 29.27 0.68 5.31 2.83 0.54 53.37 5.45 48 ER12d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 IG35_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.04 0.00 0.00 0.00 0.00 25.20 31.83 3.71 5.49 0.00 5.89 0.00 0.00 2.05 0.00 1.41 0.00 50 IG35_SR1 SilentIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.98 0.00 0.00 0.00 0.00 9.55 20.56 2.58 1.86 0.00 4.40 0.00 0.00 1.31 0.00 1.71 0.00 51 IG35_SR2 SilentIntergenicRegion 0 1.51 2.89 2.74 1.45 2.96 3.04 1.47 1.02 1.75 1.62 1.22 24.74 99.01 5.23 9.68 3.06 5.74 0.36 2.77 1.51 1.05 7.08 2.32 52 IG35_AR3 ActiveIntergenicRegion 0 1.51 3.15 5.15 5.59 3.27 3.50 2.38 1.71 3.47 2.44 1.93 39.66 155.21 6.85 10.09 2.74 11.90 1.24 2.80 2.30 2.12 8.85 3.08