Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GADD45A Gene 0 49.67 28.77 80.21 36.50 37.00 36.03 23.43 37.52 50.82 40.78 40.36 93.81 99.21 67.36 201.79 58.47 113.67 34.63 33.61 17.68 116.26 67.90 37.42 2 370986 Transcript 0 0.24 0.00 0.00 0.37 0.00 0.10 0.00 0.00 0.64 0.29 0.08 0.00 0.00 0.21 0.90 0.00 0.19 0.50 0.58 0.00 0.39 0.11 0.00 3 451087 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 370985 Transcript 0 3.19 0.00 10.11 1.47 0.00 0.00 0.00 1.73 0.00 6.61 0.00 0.00 0.00 0.00 8.90 4.36 7.95 5.06 0.00 0.00 0.00 0.00 3.50 5 460575 Transcript 0 1.66 0.07 3.03 0.29 0.10 0.93 0.78 1.40 1.99 0.84 1.55 0.75 1.86 5.73 13.64 4.74 13.20 2.38 2.65 0.31 2.55 0.96 2.87 6 484245 Transcript 0 1.62 0.33 4.85 0.70 0.50 0.67 0.45 0.93 4.68 0.66 1.29 0.63 0.79 6.52 14.95 6.94 7.98 2.56 1.67 0.44 3.49 1.69 2.20 7 ER1a ExonRegion 0 0.48 0.00 0.00 0.74 0.00 0.20 0.00 0.00 0.67 0.00 0.15 0.00 0.00 0.42 1.80 0.00 0.38 1.00 1.16 0.00 0.77 0.22 0.00 8 E1_Ab KnownBoundary 0 3.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.00 9 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.81 0.00 4.39 0.00 0.00 0.00 2.84 2.82 0.00 10 E1_Ad KnownBoundary 0 46.23 2.57 14.81 1.53 40.32 40.26 19.21 7.35 8.83 8.60 30.69 0.00 19.64 57.45 171.33 39.65 76.95 34.74 24.85 7.54 97.98 17.70 22.28 11 ER1b ExonRegion 0 2.12 0.00 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.00 8.70 0.00 3.30 0.00 0.00 0.00 4.41 2.08 0.00 12 ER1c ExonRegion 0 18.52 1.31 6.21 0.39 13.47 17.55 6.29 1.54 3.00 3.03 11.94 0.00 4.02 23.20 77.09 18.05 37.02 13.00 11.95 1.22 41.24 8.85 11.75 13 ER1d ExonRegion 0 16.25 3.37 40.53 11.56 11.07 15.01 8.68 13.11 20.57 23.97 37.73 12.40 21.64 56.52 177.54 68.17 91.68 54.49 36.63 12.10 147.28 24.41 37.05 14 E1a_E2b KnownJunction 0 36.01 17.63 84.65 46.45 47.20 48.55 28.84 33.93 50.69 53.86 46.38 36.76 19.80 83.94 320.17 37.43 138.57 78.06 29.65 35.28 266.45 42.13 43.36 15 E1a_E2c KnownJunction 0 3.19 0.00 10.11 1.47 0.00 0.00 0.00 1.73 0.00 6.61 0.00 0.00 0.00 0.00 8.90 4.36 7.95 5.06 0.00 0.00 0.00 0.00 3.50 16 ER2a ExonRegion 0 1.62 0.33 4.85 0.70 0.50 0.67 0.45 0.93 4.68 0.66 1.29 0.63 0.79 6.52 14.95 6.94 7.98 2.56 1.67 0.44 3.49 1.69 2.20 17 E2_Ab KnownBoundary 0 0.00 0.00 12.27 1.66 0.00 0.00 2.08 1.93 7.03 0.00 0.00 0.00 6.82 0.00 18.05 11.54 8.70 3.52 4.42 0.00 5.75 0.00 3.59 18 ER2b ExonRegion 0 18.06 10.77 101.27 38.92 24.59 35.37 33.30 37.91 55.51 51.95 74.39 30.61 39.28 93.67 297.08 76.19 196.65 82.40 55.03 27.07 299.25 67.85 50.07 19 E2_Da KnownBoundary 0 6.52 0.00 8.25 0.00 3.65 11.02 3.75 6.04 9.58 1.42 2.68 6.15 0.00 7.36 33.01 20.08 24.96 8.25 4.80 2.62 7.66 3.12 4.35 20 E2a_E2c KnownJunction 0 26.82 8.62 89.56 46.51 8.40 21.98 9.89 34.42 41.75 52.43 38.90 11.25 52.92 89.71 239.94 68.19 234.41 66.70 41.13 15.72 244.33 62.21 82.46 21 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER2c ExonRegion 0 3.32 0.15 6.06 0.57 0.19 1.86 1.55 2.80 3.97 1.67 3.11 1.51 3.73 11.46 27.29 9.49 26.41 4.76 5.30 0.62 5.11 1.93 5.74 23 E2_Ac KnownBoundary 0 3.33 2.70 9.25 0.00 0.00 5.28 1.90 3.98 6.28 0.00 0.00 0.00 0.00 6.65 27.44 22.73 17.58 6.47 14.02 0.00 3.15 0.00 10.76 24 ER2d ExonRegion 0 47.04 13.79 102.43 40.03 22.76 57.35 30.47 42.25 63.40 49.21 52.29 30.27 39.69 119.19 359.03 109.07 215.86 72.14 52.76 25.84 267.27 77.29 65.30 25 E2c_E3a KnownJunction 0 58.23 31.90 134.44 59.37 42.61 33.56 39.97 54.46 113.16 75.19 87.71 58.22 67.04 129.67 361.58 165.08 208.13 125.48 116.14 39.25 295.79 129.75 118.40 26 ER2e ExonRegion 0 55.03 24.40 124.99 54.52 32.11 42.18 34.42 44.94 100.04 67.67 88.91 38.97 79.73 146.17 368.46 154.55 257.47 107.17 101.93 34.04 301.91 125.01 111.59 27 ER2f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 I2 Intron 0 16.52 1.57 5.81 2.61 6.46 2.17 5.78 4.63 4.35 2.81 4.17 11.71 14.72 9.49 33.68 7.48 14.07 0.90 2.78 0.87 2.26 6.10 5.28 29 I2_AR2 ActiveIntronRegion 0 22.71 1.93 7.28 3.28 8.64 2.44 6.66 4.89 5.23 2.90 4.22 15.48 21.56 8.51 38.78 5.65 13.17 0.87 2.12 1.41 1.67 7.72 4.18 30 E3_Aa NovelBoundary 0 18.82 5.39 12.77 1.86 10.78 0.00 1.94 8.83 7.47 3.12 4.90 27.46 46.43 10.30 29.05 10.85 7.29 0.00 8.94 0.00 0.00 5.14 4.01 31 ER3a ExonRegion 0 153.77 89.33 189.25 75.70 101.82 108.30 67.38 83.67 119.46 85.65 114.04 147.39 220.64 169.97 413.00 143.40 320.06 84.43 91.35 46.97 274.04 122.18 101.53 32 E3_Da KnownBoundary 0 175.29 99.92 280.83 125.43 192.87 125.67 75.30 112.67 142.56 100.95 114.29 298.30 329.85 148.63 352.56 137.23 327.63 55.46 63.91 63.85 247.23 159.15 94.33 33 ER3b ExonRegion 1 106.80 74.97 161.95 90.94 92.51 60.13 42.84 88.53 107.55 88.87 54.58 325.12 298.11 89.16 311.88 63.92 118.82 17.19 38.07 28.91 79.28 175.22 44.47 34 ER3c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00