Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TGFBR3 Gene 0 63.88 1.45 3.96 13.92 22.52 7.15 10.63 15.95 23.55 6.41 30.23 18.73 2.93 0.95 3.03 0.40 4.63 0.40 0.59 2.59 295.89 169.28 69.31 2 370399 Transcript 0 3.40 0.00 0.00 0.49 0.00 1.41 0.75 1.06 1.69 0.49 2.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.37 9.64 5.31 3 212355 Transcript 0 11.71 0.00 0.86 3.52 6.12 7.54 5.30 3.10 11.76 4.38 25.09 10.55 0.00 0.14 0.00 0.00 2.35 0.38 0.00 1.80 255.24 108.02 59.25 4 417833 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 465892 Transcript 0 4.08 1.36 0.69 0.77 2.81 0.00 1.44 1.51 1.54 0.07 1.13 2.97 3.83 1.28 3.02 1.50 2.35 0.39 0.94 2.05 3.33 1.49 3.33 6 468996 Transcript 0 0.00 0.00 0.00 0.00 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.18 0.04 0.06 7 470600 Transcript 0 1.78 0.00 0.00 0.00 2.25 0.00 0.00 0.47 0.52 0.00 0.54 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.50 2.54 3.84 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 11 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 3.30 0.00 0.00 0.47 2.08 0.44 1.38 0.00 0.93 2.38 7.51 0.00 0.00 0.00 0.00 0.00 0.00 1.15 0.00 0.00 48.16 18.94 32.30 13 E3_Ab KnownBoundary 0 21.86 0.00 0.00 2.06 3.48 2.90 4.50 0.00 5.21 0.00 12.27 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 0.00 222.15 43.23 99.45 14 E3_Ac KnownBoundary 0 22.00 0.00 0.00 0.00 10.61 0.00 7.73 0.00 1.79 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 147.59 8.82 24.58 15 ER3b ExonRegion 0 20.20 0.00 0.00 1.36 7.54 1.83 9.27 0.00 4.72 2.19 8.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 287.28 40.53 82.49 16 ER3c ExonRegion 0 5.60 0.00 0.89 1.44 1.57 0.80 1.84 2.12 5.10 2.46 12.27 0.83 0.00 0.00 0.08 0.00 4.88 0.00 0.00 0.91 195.20 45.07 44.21 17 E3a_E4a KnownJunction 0 10.82 0.00 1.15 3.70 0.00 2.73 0.00 3.86 8.62 3.76 16.58 0.00 0.00 0.00 0.00 0.00 8.42 0.00 0.00 0.00 201.15 72.81 84.51 18 ER4a ExonRegion 0 6.08 0.00 4.54 4.59 3.74 5.39 3.88 8.41 18.34 8.67 38.80 10.60 0.30 0.05 0.57 0.00 4.27 1.35 0.00 1.88 448.81 112.49 79.15 19 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E4a_E6a KnownJunction 0 0.00 0.00 1.83 7.26 3.65 10.96 0.00 9.28 16.12 5.64 39.96 0.00 0.00 0.00 0.00 0.00 8.70 2.32 0.00 6.52 429.29 153.76 122.33 21 E5_Aa NovelBoundary 0 1098.49 1367.65 531.62 594.16 992.19 859.96 1272.59 612.58 573.37 495.79 421.00 397.93 402.08 394.85 918.48 1223.10 947.54 840.05 1137.44 1264.92 826.46 620.05 1314.59 22 ER5a ExonRegion 0 8.17 2.73 1.38 1.53 5.61 0.00 2.89 3.02 3.08 0.14 2.27 5.94 7.66 2.55 6.04 2.99 4.71 0.77 1.87 4.09 6.67 2.97 6.65 23 I5_SR2 SilentIntronRegion 0 21.69 0.07 0.16 0.96 3.01 0.00 2.65 1.38 1.51 1.12 0.00 0.22 0.14 0.05 0.10 0.00 0.35 0.00 0.00 0.23 7.65 1.94 5.16 24 I5_AR2 ActiveIntronRegion 0 49.53 0.00 0.79 1.51 4.65 0.00 3.17 0.00 0.49 2.08 0.00 0.00 2.49 0.00 1.18 0.00 0.00 0.00 0.00 0.00 5.70 1.07 3.00 25 ER6a ExonRegion 0 10.01 0.00 4.13 3.73 3.49 4.20 1.62 8.00 24.28 4.97 37.95 8.80 1.85 0.74 1.63 0.00 3.84 0.59 0.00 0.90 629.53 154.36 100.20 26 E6a_E8a KnownJunction 0 30.38 0.00 1.39 10.99 4.33 0.00 2.25 10.47 27.92 2.93 40.96 18.91 0.00 0.00 0.00 0.00 0.00 2.45 0.00 3.26 766.66 192.21 171.15 27 I6_AR8 ActiveIntronRegion 0 13.16 0.00 0.00 0.00 3.74 0.00 0.92 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.00 28 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.37 0.09 0.12 29 E7_Da NovelBoundary 0 32.38 0.00 0.00 3.63 17.32 0.00 1.90 0.00 0.00 0.00 0.00 6.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.59 0.00 0.00 30 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER8a ExonRegion 0 18.45 0.00 2.85 8.57 4.71 7.14 7.88 4.23 25.96 4.90 35.80 22.78 0.00 1.67 3.03 0.00 2.44 0.56 1.18 5.61 701.56 177.63 119.17 32 E8a_E9a KnownJunction 0 5.70 0.00 0.00 13.02 0.00 2.44 2.03 5.91 34.49 8.03 43.06 26.56 0.00 2.30 0.00 0.00 0.00 0.00 0.00 8.95 704.51 172.80 103.55 33 ER9a ExonRegion 0 7.56 0.00 3.38 11.71 7.59 5.94 6.91 8.03 26.53 6.40 41.40 18.32 0.00 2.34 0.96 0.00 7.00 0.00 1.72 6.24 558.24 208.35 119.72 34 E9_Da KnownBoundary 0 10.22 0.00 8.96 18.95 15.37 11.30 6.67 10.47 35.01 5.99 58.80 35.71 0.00 9.83 8.90 0.00 3.93 0.00 0.00 0.00 565.26 267.10 178.49 35 ER9b ExonRegion 0 10.33 0.00 2.70 10.40 11.13 7.51 4.57 11.34 32.78 8.29 67.15 40.69 0.00 2.25 2.43 0.00 7.49 0.00 3.56 9.01 536.85 364.01 187.72 36 E9b_E10a KnownJunction 0 17.86 0.00 0.00 9.82 7.13 29.64 11.13 12.28 33.56 5.80 83.07 41.11 0.00 2.12 0.00 0.00 13.37 0.00 0.00 2.88 768.20 193.31 109.78 37 ER10a ExonRegion 0 32.51 0.61 1.42 8.02 10.13 9.56 12.11 12.09 31.34 6.19 56.44 34.92 3.75 0.56 1.24 0.00 9.26 0.31 0.96 3.65 634.22 252.41 149.87 38 E10a_E11a KnownJunction 0 18.23 0.00 1.83 7.06 4.33 0.00 4.42 3.98 22.19 6.34 44.75 18.01 0.00 0.00 0.00 0.00 3.93 2.11 0.00 3.00 394.51 162.57 111.40 39 ER11a ExonRegion 0 18.28 0.00 0.26 5.39 9.67 11.96 10.47 10.46 24.16 4.14 47.98 24.31 2.00 0.76 0.82 1.02 4.39 0.62 0.00 2.83 305.96 184.41 86.55 40 E11a_E12a KnownJunction 0 28.45 0.00 1.51 4.13 19.10 6.76 5.70 2.14 28.39 4.41 49.33 19.21 14.77 0.00 0.00 0.00 0.00 2.36 0.00 2.56 223.51 164.78 95.78 41 ER12a ExonRegion 0 21.49 0.00 0.10 6.49 11.29 7.25 9.16 15.38 26.17 4.96 52.10 27.14 2.00 1.18 1.97 0.80 5.40 0.97 0.00 4.13 350.39 201.79 87.84 42 E12a_E13a KnownJunction 0 17.56 0.00 1.36 4.63 8.23 11.64 8.57 4.11 17.36 5.59 32.01 12.15 0.00 0.00 0.00 0.00 3.74 0.00 0.00 3.26 337.98 147.82 77.17 43 E12a_E13b KnownJunction 0 16.15 0.00 0.00 1.60 0.00 8.46 4.50 6.37 10.16 2.93 12.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 122.20 57.80 31.84 44 ER13a ExonRegion 0 14.29 0.00 1.23 5.45 8.03 10.54 5.96 5.19 16.98 5.16 35.76 19.48 0.00 0.41 0.00 0.00 3.30 0.00 0.00 2.13 379.59 157.31 68.28 45 ER13b ExonRegion 0 20.02 0.93 1.31 7.16 10.28 7.71 5.76 10.69 18.33 8.25 33.87 15.24 0.59 1.86 3.25 0.45 2.82 0.84 0.00 3.45 567.40 167.34 96.34 46 E13a_E14a KnownJunction 0 26.75 0.00 0.00 6.46 3.90 4.54 6.40 1.60 23.26 5.45 33.43 7.05 0.00 0.00 0.00 0.00 3.65 0.00 0.00 0.00 573.60 158.84 94.75 47 ER14a ExonRegion 0 22.19 0.00 2.40 6.73 7.54 13.66 4.42 8.54 34.14 5.14 37.58 11.43 2.57 0.38 1.84 0.00 7.55 0.00 1.06 2.75 619.78 153.59 109.96 48 E14a_E15a KnownJunction 0 32.01 0.00 1.15 15.15 7.30 0.00 7.46 7.27 29.69 2.71 54.07 13.95 0.00 0.00 0.00 0.00 12.34 0.00 0.00 0.00 728.11 228.95 169.19 49 ER15a ExonRegion 0 21.62 2.21 1.10 8.80 7.02 5.29 3.77 12.44 38.19 7.91 48.43 12.01 0.00 0.41 0.74 0.53 13.02 0.00 1.15 2.58 653.27 190.07 105.55 50 E15a_E16a KnownJunction 0 18.60 0.00 3.25 8.92 4.07 14.48 6.36 12.69 48.09 5.69 55.07 12.00 6.33 0.00 0.00 4.36 8.04 0.00 0.00 3.07 674.11 152.10 117.89 51 ER16a ExonRegion 0 22.18 0.00 2.64 13.63 10.30 10.32 5.85 14.45 35.90 5.76 43.33 17.15 2.48 0.80 1.13 0.56 13.00 0.00 0.00 2.36 601.75 221.72 122.67 52 E16a_E17a KnownJunction 0 31.19 0.00 6.03 13.02 7.05 4.88 7.95 25.63 39.53 6.18 44.96 24.61 0.00 0.00 4.45 0.00 9.54 0.00 0.00 2.62 421.63 244.51 145.37 53 ER17a ExonRegion 0 37.67 1.73 3.14 14.50 9.84 6.70 4.60 19.06 41.77 7.65 58.08 20.56 7.17 1.62 1.21 0.78 10.78 0.78 0.00 3.74 577.52 248.12 146.85 54 E17_Ab KnownBoundary 0 49.19 0.00 1.21 15.08 4.33 2.90 6.49 19.18 34.87 6.47 30.38 13.35 6.82 2.24 4.45 0.00 8.79 0.00 0.00 0.00 600.97 210.89 121.22 55 ER17b ExonRegion 0 35.49 1.73 1.23 12.45 19.20 6.23 7.28 18.98 41.74 8.21 52.33 26.09 5.94 1.96 0.77 0.00 10.18 1.72 0.00 2.98 701.11 212.31 144.34 56 E17a_E18a KnownJunction 0 32.67 0.00 4.38 13.55 10.53 4.66 10.33 26.57 40.48 7.63 55.38 40.81 20.29 0.00 4.45 0.00 4.21 2.57 0.00 2.94 785.87 245.73 132.31 57 ER18a ExonRegion 0 25.50 0.86 3.55 19.37 8.38 9.56 6.85 18.30 32.33 4.79 44.33 14.60 11.90 0.86 1.99 0.00 8.68 1.16 0.00 2.51 692.11 178.17 146.54 58 E18a_E19a KnownJunction 0 30.45 0.00 0.00 18.91 0.00 12.55 4.15 17.70 39.12 7.66 66.54 17.71 6.82 5.47 0.00 0.00 7.57 2.57 0.00 5.43 720.57 241.08 194.54 59 I18_SR5 SilentIntronRegion 0 13.23 0.19 0.36 1.14 4.39 0.58 2.11 0.50 0.96 0.88 1.07 0.20 0.00 0.06 0.41 0.00 0.45 0.13 0.00 1.00 22.80 6.52 2.98 60 I18_AR5 ActiveIntronRegion 0 19.36 0.00 0.00 6.14 2.24 0.77 2.77 4.93 2.54 0.95 0.54 0.50 0.00 0.00 0.33 0.00 0.00 0.38 0.00 0.30 13.41 4.99 4.05 61 ER19a ExonRegion 0 35.93 1.02 3.68 15.48 9.62 11.13 2.05 22.43 45.08 7.62 77.41 30.41 5.92 1.31 0.00 0.00 5.03 1.76 0.00 4.91 828.23 238.81 165.71 62 E19a_E20a KnownJunction 0 43.93 3.35 6.33 15.22 28.95 0.00 2.25 15.32 34.69 6.37 55.38 18.46 6.82 0.00 0.00 0.00 3.83 0.00 0.00 5.11 802.49 265.63 144.09 63 ER20a ExonRegion 0 27.30 0.56 2.62 15.46 18.56 2.94 2.87 15.65 36.77 5.46 47.25 20.20 4.34 1.17 4.27 0.00 5.99 0.00 0.00 3.09 710.84 167.05 112.79 64 E20_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.67 2.94 12.46 65 E20a_E21a KnownJunction 0 99.50 0.00 0.00 12.59 12.73 5.34 5.87 11.71 45.92 6.55 51.49 18.91 13.47 0.00 4.45 0.00 9.54 0.00 0.00 6.52 847.65 172.56 80.84 66 ER20b ExonRegion 0 1.78 0.00 0.00 0.00 2.25 0.00 0.00 0.47 0.52 0.00 0.54 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.50 2.54 3.84 67 ER21a ExonRegion 0 118.68 2.21 6.52 22.57 39.98 9.58 17.59 24.43 27.85 8.71 29.80 24.61 2.97 0.75 4.13 0.13 3.79 0.23 0.60 2.28 196.46 215.79 58.03 68 ER21b ExonRegion 0 4.23 0.00 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00