Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EVI5 Gene 0 22.94 14.38 21.67 19.63 25.19 19.58 24.86 18.44 30.36 16.34 11.06 40.90 28.06 14.06 19.56 23.30 17.77 7.28 14.57 11.33 23.31 64.81 48.31 2 338689 Transcript 0 3.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 370331 Transcript 0 17.28 12.76 14.21 15.46 26.24 12.32 18.28 18.37 22.91 13.63 12.46 45.47 21.37 11.17 17.96 27.83 14.12 3.75 9.84 9.48 25.87 74.59 63.33 4 474806 Transcript 0 2.68 0.20 1.98 0.00 0.51 0.99 2.70 0.94 1.08 1.26 1.16 5.74 0.77 1.18 0.59 5.08 0.60 0.03 1.21 0.19 2.94 2.77 4.31 5 466778 Transcript 0 0.00 0.00 1.57 0.00 0.00 0.00 0.95 1.48 2.07 0.74 0.00 0.51 0.56 0.00 0.89 1.28 0.95 0.00 1.38 0.61 2.54 1.80 2.09 6 492613 Transcript 0 0.00 0.00 1.08 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.30 1.29 1.89 1.25 1.42 1.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 468580 Transcript 0 3.11 0.00 4.70 0.00 3.99 0.00 13.56 6.78 3.47 0.00 2.47 0.00 0.00 2.47 0.00 3.93 8.42 0.00 0.00 0.00 11.49 35.64 16.39 8 491940 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 492513 Transcript 0 0.00 0.40 0.00 0.00 0.00 0.00 3.07 0.65 1.20 0.00 0.00 0.00 0.32 0.00 0.00 0.00 1.83 0.35 0.00 0.00 0.83 0.00 0.00 10 IG50_SR5 SilentIntergenicRegion 0 0.00 0.00 1.23 1.36 0.00 0.00 2.13 0.00 17.22 0.00 1.61 4.09 1.56 3.70 0.64 0.00 0.00 0.00 2.83 0.00 3.18 0.00 0.00 11 IG50_SR4 SilentIntergenicRegion 0 0.00 0.00 1.23 1.36 0.00 0.00 2.65 1.73 25.55 1.15 0.00 4.33 4.69 2.64 0.00 0.00 0.00 1.85 0.60 0.00 0.00 0.00 1.65 12 IG50_AR2 ActiveIntergenicRegion 0 0.35 0.00 1.23 0.91 0.00 0.00 5.30 1.73 26.14 1.15 0.00 2.89 4.69 2.44 0.00 0.00 0.00 1.85 8.49 0.00 0.00 0.00 2.94 13 IG50_SR3 SilentIntergenicRegion 0 2.12 0.00 1.12 0.00 0.00 0.00 5.02 1.73 26.55 1.86 0.00 0.00 1.76 3.92 0.00 0.00 0.00 1.85 9.56 0.00 0.00 0.00 2.94 14 ER1a ExonRegion 0 0.00 0.10 0.00 0.00 0.04 0.00 0.07 0.09 1.82 0.02 0.10 0.43 0.00 0.11 0.00 0.00 0.00 4.54 0.00 0.00 0.18 0.10 0.29 15 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.85 0.00 0.00 0.00 0.00 0.00 16 E2_Aa NovelBoundary 0 0.00 0.00 1.77 0.00 0.00 0.00 2.08 0.00 1.22 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 8.66 0.00 8.53 0.00 4.35 17 ER2a ExonRegion 0 5.66 0.74 1.98 0.00 0.00 3.98 2.87 0.26 2.63 1.61 1.69 0.00 0.00 4.72 2.35 10.27 2.39 0.10 2.30 0.77 7.60 3.95 9.46 18 E2_Ab KnownBoundary 0 3.63 0.00 0.00 1.70 0.00 0.00 0.00 8.38 6.11 4.54 7.95 0.00 0.00 2.35 0.00 3.93 0.00 8.00 0.00 0.00 16.80 2.57 3.50 19 ER2b ExonRegion 0 2.17 0.00 6.62 0.00 0.00 0.00 1.04 2.75 3.06 2.94 5.75 3.00 6.02 7.77 5.24 14.36 9.06 2.77 8.75 1.67 10.73 9.58 17.42 20 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E2a_E4a NovelJunction 0 6.52 0.00 0.00 5.96 6.88 0.00 2.25 3.90 13.77 6.23 17.95 18.46 6.82 18.78 19.16 11.79 33.29 11.23 3.67 5.43 27.92 37.29 39.44 22 E2a_E5a KnownJunction 0 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E3_Aa NovelBoundary 0 0.00 0.00 14.61 8.82 4.33 0.00 5.30 2.55 1.59 2.47 0.00 6.30 0.00 2.47 4.45 0.00 4.77 0.00 0.00 3.26 21.75 5.02 10.84 24 ER3a ExonRegion 0 0.00 0.00 4.71 0.00 0.00 0.00 2.86 4.45 6.22 2.22 0.00 1.54 1.67 0.00 2.66 3.83 2.85 0.00 4.13 1.84 7.62 5.40 6.27 25 E3_Da NovelBoundary 0 3.48 0.00 38.35 58.27 0.00 8.69 12.98 28.42 34.90 28.12 0.00 0.00 0.00 0.00 17.80 7.78 17.95 39.75 8.56 13.04 6.18 6.00 29.02 26 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER4a ExonRegion 0 6.01 3.65 2.76 1.78 5.15 4.10 10.59 6.35 13.20 4.32 8.58 19.86 11.31 15.29 10.03 14.55 14.47 5.05 4.22 7.57 33.51 19.92 25.44 28 E4_Da KnownBoundary 0 14.15 5.92 9.02 7.99 4.33 11.24 6.54 8.67 32.67 8.52 11.21 24.91 18.99 22.07 19.66 14.10 26.37 4.73 8.85 15.40 39.11 39.86 53.69 29 ER4b ExonRegion 0 8.45 2.00 9.77 7.53 7.90 11.29 17.68 7.62 31.05 10.15 16.79 42.28 22.38 17.00 11.91 32.25 45.78 12.61 20.70 10.78 55.04 43.16 45.68 30 E4b_E5a KnownJunction 0 3.78 3.35 3.67 6.53 6.62 5.22 0.00 3.70 23.00 9.24 9.90 94.08 32.14 24.55 18.79 31.10 20.94 2.49 13.37 17.71 35.52 51.74 57.96 31 ER5a ExonRegion 0 4.77 4.42 8.60 12.32 16.58 9.56 17.48 12.95 28.19 21.39 16.91 80.89 41.64 17.07 5.68 29.14 44.77 4.97 24.01 13.84 39.83 53.23 51.31 32 E5a_E6a KnownJunction 0 0.00 0.00 3.43 0.00 0.00 0.00 5.61 1.81 1.36 2.71 2.47 18.91 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 3.15 2.88 4.35 33 E5a_E7a KnownJunction 1 11.19 9.34 13.78 25.11 7.47 7.78 15.68 16.84 46.79 27.02 28.01 134.74 19.48 29.73 14.09 47.25 59.56 3.65 40.10 11.89 54.43 88.97 75.12 34 ER6a ExonRegion 0 5.06 0.06 1.03 0.00 2.05 0.00 2.32 1.70 0.33 0.70 0.48 4.06 3.08 0.00 0.00 5.71 0.00 0.00 2.54 0.00 1.00 4.26 3.44 35 E6_Da NovelBoundary 0 3.19 0.00 0.00 0.00 0.00 0.00 0.00 15.24 2.84 6.04 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 7.94 36 ER7a ExonRegion 0 12.55 9.01 17.68 19.16 9.80 10.98 16.41 17.59 26.17 19.55 19.01 91.67 39.56 19.47 7.69 32.27 39.93 2.73 21.49 11.43 28.55 57.93 53.85 37 E7a_E8a KnownJunction 0 17.86 2.89 13.87 11.72 3.23 2.78 21.07 15.03 29.54 17.54 18.74 45.31 61.20 16.13 6.30 21.02 25.62 2.11 13.65 20.07 11.68 66.13 50.88 38 ER8a ExonRegion 0 8.78 6.13 11.60 13.99 9.49 11.79 17.12 18.74 24.59 16.53 12.58 51.43 33.27 17.65 9.86 32.57 42.34 0.59 12.27 8.85 16.95 61.70 54.97 39 E8a_E9a KnownJunction 0 7.41 3.03 20.34 18.88 4.33 18.23 10.20 17.87 26.74 21.36 19.69 49.97 40.26 9.42 9.89 24.95 30.86 0.00 7.91 6.33 17.61 57.56 40.55 40 ER9a ExonRegion 0 5.04 6.63 20.21 21.46 11.72 11.76 17.69 11.76 30.74 18.96 18.36 59.89 57.47 14.71 9.97 21.18 31.31 5.91 9.58 13.37 14.85 81.47 38.92 41 E9_Da NovelBoundary 0 0.00 0.00 3.34 1.86 0.00 0.00 0.00 0.00 3.50 1.29 0.00 0.00 0.00 2.47 10.75 0.00 0.00 0.00 0.00 2.81 0.00 0.00 0.00 42 E9a_E10a KnownJunction 0 0.00 5.39 11.86 21.78 24.19 2.73 17.31 13.97 36.43 23.26 20.32 64.22 46.43 16.60 13.72 20.76 28.52 3.69 8.94 14.25 18.04 62.76 55.23 43 ER10a ExonRegion 0 5.94 11.66 21.84 17.96 12.32 12.66 26.02 11.70 40.08 14.56 16.39 52.46 53.64 17.06 12.51 18.25 25.24 8.87 12.23 14.10 15.35 72.88 50.51 44 E10a_E11a KnownJunction 0 2.74 9.47 39.77 17.91 8.57 39.07 56.97 14.17 37.01 16.17 20.95 62.87 68.02 19.72 26.95 10.60 33.66 5.93 34.64 17.19 23.10 58.11 57.28 45 ER11a ExonRegion 0 7.69 9.67 16.13 19.93 11.51 27.10 33.53 10.37 39.84 13.19 15.10 76.39 53.83 21.28 12.06 26.78 24.98 10.61 12.95 14.94 31.61 62.62 59.52 46 E11a_E12a KnownJunction 0 12.22 12.30 23.48 23.24 8.66 18.46 22.61 7.48 53.15 9.54 10.06 69.77 38.31 29.84 24.60 37.00 25.34 11.65 8.85 15.40 24.09 78.38 48.83 47 ER12a ExonRegion 0 22.50 4.90 22.78 18.70 11.47 9.37 17.78 10.55 38.54 11.31 15.40 45.77 40.87 21.63 15.36 22.99 34.46 8.60 16.15 11.14 31.03 59.44 63.59 48 E12a_E13a KnownJunction 0 26.00 3.03 15.08 21.51 8.32 8.23 32.64 10.72 19.68 9.16 14.37 24.91 41.56 19.31 19.53 24.18 15.52 4.44 9.60 17.71 28.42 68.64 50.11 49 ER13a ExonRegion 0 26.36 3.58 23.89 25.18 12.17 12.49 31.43 18.35 36.11 9.91 11.64 59.58 49.13 30.05 16.03 38.78 28.92 8.14 4.55 15.40 30.43 62.06 72.72 50 E13a_E14a KnownJunction 0 12.74 5.99 36.72 23.67 51.27 39.81 57.23 18.24 59.37 14.45 14.06 120.94 73.05 21.60 4.45 39.82 55.63 11.61 27.39 8.88 32.99 62.21 67.52 51 ER13b ExonRegion 0 13.70 5.24 31.28 24.60 33.66 29.92 42.85 20.20 48.04 11.47 14.55 85.45 65.66 21.28 10.08 39.89 49.69 9.72 17.60 8.62 34.80 62.07 65.69 52 ER14a ExonRegion 0 10.25 8.46 30.05 22.85 28.52 29.24 43.80 17.33 41.41 12.77 18.16 103.22 46.41 26.76 17.71 29.02 39.87 7.00 19.11 5.49 26.21 79.50 69.17 53 E14a_E15a KnownJunction 0 6.22 15.19 20.82 16.95 27.16 41.28 28.00 14.75 14.44 12.79 5.26 24.91 6.82 4.30 9.39 0.00 8.79 8.33 18.26 2.88 22.61 63.38 97.40 54 E14a_E17a KnownJunction 0 0.00 0.00 0.00 1.63 0.00 0.00 3.80 1.89 1.79 0.00 17.21 55.97 13.47 14.77 15.82 19.82 21.69 0.00 0.00 0.00 0.00 2.39 0.00 55 ER14b ExonRegion 1 9.26 13.98 20.22 20.70 21.91 29.46 31.61 17.28 25.86 10.32 19.57 75.77 18.17 22.13 19.40 20.80 29.09 6.35 13.14 1.99 27.13 71.75 89.57 56 ER15a ExonRegion 0 6.73 7.09 21.61 17.80 27.00 21.51 26.84 16.34 17.22 9.70 8.61 11.55 3.13 1.43 6.07 1.35 10.90 5.94 14.09 2.13 34.52 61.87 82.31 57 E15_Da NovelBoundary 0 3.70 0.00 2.93 1.86 0.00 0.00 3.80 2.55 0.00 0.00 0.00 0.00 19.48 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 4.35 58 E15a_E16a KnownJunction 0 0.00 0.00 11.24 9.66 11.80 5.00 14.88 2.46 9.64 3.12 7.63 12.60 0.00 0.00 9.64 0.00 0.00 0.00 9.22 0.00 29.65 24.98 39.10 59 E15a_E17a KnownJunction 0 3.11 0.00 4.70 0.00 3.99 0.00 13.56 6.78 3.47 0.00 2.47 0.00 0.00 2.47 0.00 3.93 8.42 0.00 0.00 0.00 11.49 35.64 16.39 60 E16_Aa NovelBoundary 0 6.67 0.00 8.34 3.20 0.00 0.00 17.09 12.82 5.99 1.32 0.00 0.00 0.00 0.00 0.00 3.25 4.21 2.57 0.00 6.52 0.00 0.00 8.45 61 ER16a ExonRegion 0 1.91 5.93 8.70 14.55 7.39 11.65 10.29 9.72 13.10 6.83 3.09 11.10 7.53 1.79 1.66 3.09 3.46 8.92 10.34 7.87 36.79 36.34 44.33 62 E16a_E17a KnownJunction 0 6.22 18.62 10.94 14.52 24.28 17.43 14.31 6.98 11.46 12.33 4.84 0.00 12.66 2.18 4.45 0.00 0.00 8.62 4.14 5.62 40.53 60.31 35.85 63 E17_Aa NovelBoundary 0 3.63 3.29 3.78 7.06 3.57 0.00 10.42 6.65 8.51 0.00 2.68 0.00 0.00 2.47 0.00 7.60 11.69 0.00 0.00 6.39 5.93 2.57 7.77 64 ER17a ExonRegion 0 5.69 6.63 23.30 15.32 30.54 17.93 23.11 15.72 26.05 7.44 16.35 67.67 46.66 22.80 23.73 41.57 39.32 11.85 20.34 12.37 38.70 75.33 86.03 65 E17a_E18a KnownJunction 0 10.59 0.00 35.63 18.68 26.57 4.66 27.69 16.55 28.76 7.52 26.16 62.27 39.28 26.84 33.87 53.15 63.39 10.03 43.39 9.08 42.87 93.87 66.50 66 ER18a ExonRegion 0 15.57 5.88 34.76 18.50 24.56 21.26 24.83 9.30 24.11 15.12 20.37 60.61 37.49 24.29 19.26 41.57 43.97 15.42 23.77 10.05 43.90 69.30 74.17 67 E18_Da KnownBoundary 0 0.00 0.00 4.64 0.00 0.00 0.00 0.00 0.00 0.00 4.78 2.47 6.30 0.00 2.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 E18a_E19a KnownJunction 0 59.86 18.81 39.44 35.16 41.26 15.50 44.60 17.25 32.41 15.45 24.64 57.92 54.54 7.89 29.05 55.28 63.49 29.18 79.25 13.74 48.68 117.26 116.18 69 ER18b ExonRegion 0 0.00 0.00 1.08 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.30 1.29 1.89 1.25 1.42 1.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 ER19a ExonRegion 0 18.62 11.28 27.27 20.73 17.75 14.45 26.13 14.95 28.66 11.44 23.02 58.33 32.00 16.22 22.30 40.82 37.20 13.83 25.20 13.31 33.91 68.86 64.38 71 E19_Da NovelBoundary 0 10.74 3.35 4.41 1.50 0.00 4.54 12.10 4.35 3.04 5.67 0.00 0.00 0.00 0.00 9.52 0.00 0.00 0.00 0.00 2.36 0.00 3.12 3.59 72 E19a_E20a KnownJunction 0 6.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73 E19a_E21a KnownJunction 0 19.41 8.75 18.36 21.64 12.31 20.39 20.31 6.37 20.78 6.07 16.64 38.11 54.05 14.36 18.67 43.66 28.80 8.46 22.78 15.02 25.76 53.46 74.69 74 E20_Aa NovelBoundary 0 7.41 5.66 5.32 1.66 11.54 5.05 16.43 0.00 9.09 2.39 0.00 12.75 5.84 0.00 4.45 0.00 4.68 2.07 0.00 3.20 0.00 0.00 4.27 75 ER20a ExonRegion 0 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76 E21_Aa NovelBoundary 0 13.48 3.35 1.83 3.43 15.37 0.00 6.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 77 ER21a ExonRegion 0 14.32 5.37 22.47 16.38 17.92 20.07 23.17 17.27 30.16 12.33 16.64 47.39 22.61 14.50 15.72 38.98 19.36 10.56 21.93 18.29 33.96 64.50 71.27 78 E21_Da KnownBoundary 0 13.48 0.00 23.83 19.58 16.38 25.33 13.47 21.56 36.69 16.41 22.74 80.73 39.45 14.72 23.12 37.94 25.99 18.24 12.14 18.28 61.04 53.82 51.13 79 ER21b ExonRegion 0 11.79 9.30 18.56 15.38 20.34 23.53 34.12 16.45 40.86 13.27 22.86 64.20 27.07 11.00 12.60 31.50 37.72 19.22 25.21 12.89 50.37 51.14 54.12 80 E21_Db KnownBoundary 0 0.00 5.79 0.00 0.00 0.00 0.00 0.00 2.34 1.59 0.00 0.00 0.00 6.49 0.00 0.00 0.00 4.77 2.11 0.00 0.00 0.00 0.00 0.00 81 E21b_E22a KnownJunction 0 17.86 11.51 20.55 12.02 32.68 30.10 60.81 12.98 50.40 11.85 22.85 48.77 13.96 12.60 13.85 22.47 30.48 17.53 35.20 16.94 42.94 62.03 64.11 82 ER21c ExonRegion 0 0.00 0.40 0.00 0.00 0.00 0.00 3.07 0.65 1.20 0.00 0.00 0.00 0.32 0.00 0.00 0.00 1.83 0.35 0.00 0.00 0.83 0.00 0.00 83 ER22a ExonRegion 0 14.60 12.07 19.29 16.55 7.64 11.92 26.63 11.74 31.02 15.93 18.40 52.09 30.88 19.18 15.96 40.31 17.57 12.91 23.49 23.40 43.68 64.57 67.36 84 E22_Da NovelBoundary 0 0.00 0.00 0.00 0.00 3.57 0.00 5.96 1.81 4.34 0.00 0.00 6.00 0.00 0.00 0.00 0.00 13.74 0.00 4.33 0.00 0.00 0.00 0.00 85 E22a_E23a KnownJunction 0 7.19 15.46 34.09 20.51 6.96 9.94 17.71 8.46 27.05 18.53 22.01 51.17 19.97 35.61 18.54 38.88 35.06 15.50 33.51 15.79 52.57 68.03 53.86 86 ER23a ExonRegion 0 7.76 11.88 19.20 16.21 9.67 14.33 17.61 6.41 25.18 13.72 20.84 59.89 31.95 23.03 12.39 35.08 24.72 9.84 17.82 9.66 44.33 62.66 74.27 87 E23a_E24a KnownJunction 0 3.04 5.99 2.54 6.96 18.93 0.00 6.76 13.31 10.53 7.52 14.69 51.47 13.96 8.01 10.75 32.30 14.31 0.00 4.80 6.39 30.27 73.24 76.40 88 I23_AR3 ActiveIntronRegion 0 2.47 3.44 3.02 1.73 6.72 1.99 3.05 3.04 3.94 1.55 1.63 13.66 4.46 0.13 4.52 8.15 3.55 2.75 1.25 4.91 1.11 3.08 6.62 89 I23_AR4 ActiveIntronRegion 0 0.35 2.52 1.59 0.35 4.51 3.33 1.72 3.46 7.09 1.42 2.58 10.02 8.86 2.29 6.45 4.29 2.45 3.49 0.00 6.62 1.71 4.90 12.94 90 ER24a ExonRegion 0 31.53 19.54 25.87 23.97 33.56 24.64 29.81 23.42 35.30 19.74 10.23 39.47 28.77 14.33 25.17 23.36 13.93 7.51 14.89 12.57 21.46 75.95 50.26