Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-7O11.1 Gene 0 4.84 10.99 28.26 14.32 13.23 31.23 4.00 12.50 15.50 16.75 7.08 5.76 6.32 18.50 9.39 14.42 11.48 9.84 4.67 2.53 3.03 0.38 1.08 2 412378 Transcript 0 0.04 0.73 0.05 0.00 0.00 1.34 0.00 0.02 0.00 0.01 0.00 0.00 0.00 0.90 1.72 1.07 0.00 0.05 0.04 0.00 0.00 0.00 0.00 3 446167 Transcript 0 0.93 0.96 0.43 0.86 6.22 13.21 1.17 0.00 0.25 1.15 1.93 0.00 5.52 3.01 0.00 0.96 4.17 0.00 0.00 0.00 0.00 0.00 0.00 4 445226 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 0.09 1.46 0.10 0.00 0.00 2.69 0.00 0.05 0.00 0.02 0.00 0.00 0.00 1.81 3.43 2.13 0.00 0.10 0.09 0.00 0.00 0.00 0.00 6 E1_Da NovelBoundary 0 7.33 2.76 10.64 5.59 4.33 16.07 1.68 1.89 1.36 10.50 0.00 0.00 0.00 7.12 0.00 15.21 21.79 2.40 3.95 0.00 0.00 0.00 4.35 7 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2_Aa NovelBoundary 0 0.00 0.00 16.76 18.05 29.03 39.75 4.24 2.09 17.25 7.74 18.58 0.00 12.99 17.31 17.80 19.91 20.10 9.70 9.60 0.00 0.00 0.00 4.18 9 E2_Ab NovelBoundary 0 3.33 3.03 19.13 17.08 34.38 93.53 3.97 7.64 3.36 10.80 7.21 6.30 20.45 14.66 0.00 7.69 17.11 5.10 0.00 3.26 0.00 0.00 8.71 10 ER2a ExonRegion 0 1.87 1.91 0.86 1.04 12.43 26.43 2.34 0.00 0.51 2.29 0.00 0.00 11.04 6.02 0.00 1.92 8.35 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2b ExonRegion 0 4.64 1.69 4.64 2.73 14.40 43.88 3.12 1.15 1.38 7.92 2.81 0.00 9.60 9.74 3.38 8.85 9.90 0.00 0.00 0.00 0.00 0.00 2.66 12 E2_Da NovelBoundary 0 9.93 9.27 7.95 5.99 0.00 12.55 2.16 1.77 6.34 7.79 2.53 0.00 0.00 14.36 4.45 6.66 4.49 2.57 0.00 0.00 0.00 0.00 0.00 13 E2a_E3a KnownJunction 0 10.59 0.00 17.06 5.96 0.00 27.20 2.25 6.74 2.89 16.01 7.53 0.00 0.00 5.30 10.75 6.66 4.39 1.66 0.00 0.00 0.00 0.00 3.76 14 E3_Aa NovelBoundary 0 2.89 6.64 17.44 7.36 0.00 7.55 0.00 9.20 6.02 4.27 0.00 6.30 0.00 5.06 4.82 0.00 4.49 0.00 0.00 0.00 3.15 0.00 0.00 15 ER3a ExonRegion 0 9.04 10.61 34.13 17.82 15.19 40.57 6.26 14.22 15.25 26.60 7.01 5.70 3.33 21.80 12.70 14.74 12.51 15.53 4.26 1.87 4.56 0.00 1.27 16 E3_Da KnownBoundary 0 12.74 28.74 50.89 17.85 19.02 37.82 9.85 21.65 24.74 25.25 2.37 6.30 15.26 21.54 19.28 12.13 13.09 18.32 9.13 3.13 0.00 0.00 0.00 17 E3a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3b ExonRegion 0 4.60 16.58 40.26 19.14 20.64 40.79 4.72 18.34 25.56 21.52 10.13 12.02 8.42 24.89 11.87 17.24 15.66 12.90 6.30 3.77 4.14 0.61 0.86 19 E3_Ab KnownBoundary 0 3.63 10.92 49.20 43.55 7.64 20.90 2.21 30.56 36.95 18.96 7.37 6.30 8.28 21.48 28.80 28.45 12.62 16.83 4.80 5.31 3.15 0.00 0.00 20 ER3c ExonRegion 0 3.24 14.28 34.25 18.52 6.93 17.70 3.05 15.95 18.37 12.52 9.99 2.60 9.61 20.82 8.88 22.80 12.48 9.16 8.60 4.74 2.86 1.06 1.50 21 ER3d ExonRegion 0 0.00 6.10 0.61 1.36 0.00 0.00 0.00 0.00 1.85 0.00 3.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3e ExonRegion 0 0.00 0.00 0.00 0.68 0.00 0.00 0.00 0.00 0.00 0.00 3.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 IG49 Intergenic 0 7.74 12.56 27.45 14.96 10.51 22.50 3.87 14.72 12.11 15.28 6.65 6.28 4.51 12.14 10.23 10.14 5.45 8.28 4.14 4.49 0.66 0.56 1.83 24 IG49_SR3 SilentIntergenicRegion 0 7.38 8.21 22.78 10.80 6.38 22.88 5.59 17.48 10.81 12.54 10.29 12.71 12.86 20.09 11.83 17.99 7.87 4.89 8.18 2.73 0.40 1.91 2.15 25 IG49_AR2 ActiveIntergenicRegion 0 15.88 22.40 49.42 24.30 16.41 39.91 4.28 21.92 17.09 25.14 10.03 7.42 3.52 17.99 15.90 13.06 6.60 13.94 5.33 8.81 0.75 0.20 2.99 26 IG49_SR2 SilentIntergenicRegion 0 4.41 14.01 28.57 18.91 15.06 20.79 5.11 16.27 16.52 18.21 6.64 7.34 4.18 11.94 11.10 11.95 7.95 9.72 3.43 3.33 1.31 0.82 1.36