Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-184I16.1 Gene 0 9.50 5.05 8.01 8.21 11.73 7.12 12.31 8.91 7.88 4.65 8.12 10.10 9.05 10.23 14.00 15.23 11.50 5.65 5.30 5.06 4.71 4.62 8.06 2 398804 Transcript 0 4.72 1.51 1.99 3.87 5.24 3.67 3.46 3.35 3.87 3.21 2.51 5.74 4.84 3.02 10.42 6.13 8.87 4.08 4.34 3.47 2.57 1.25 4.56 3 439057 Transcript 0 0.00 0.00 0.00 1.25 0.00 0.00 0.00 0.00 1.03 1.05 2.90 0.00 0.00 1.89 5.32 0.00 5.23 1.54 2.39 0.00 0.00 0.00 0.00 4 418149 Transcript 0 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.00 0.00 5 453015 Transcript 0 9.62 3.59 2.11 5.79 9.46 6.98 11.02 8.60 6.89 3.79 3.15 1.47 5.90 4.89 9.02 16.36 5.34 4.19 5.89 6.06 6.87 3.10 10.14 6 434346 Transcript 0 11.46 7.61 16.18 18.20 23.23 10.45 23.22 18.71 14.51 6.39 11.92 18.30 19.36 14.57 17.56 21.99 13.15 5.82 7.56 3.57 3.63 7.49 8.87 7 E1_Da NovelBoundary 0 6.67 0.00 7.78 3.66 0.00 11.58 2.03 8.34 8.25 6.21 0.00 0.00 0.00 9.54 0.00 18.54 3.65 5.93 4.80 11.38 8.15 6.06 7.51 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2_Ab NovelBoundary 0 18.30 6.71 9.34 0.00 0.00 13.86 8.61 6.74 7.75 3.55 10.00 6.15 0.00 2.35 18.54 24.27 29.83 6.43 3.67 6.01 3.03 0.00 8.71 10 ER2a ExonRegion 0 0.00 0.00 0.00 1.25 0.00 0.00 0.00 0.00 1.03 1.05 2.90 0.00 0.00 1.89 5.32 0.00 5.23 1.54 2.39 0.00 0.00 0.00 0.00 11 ER2b ExonRegion 0 1.41 0.59 6.35 0.71 1.23 2.60 0.95 2.42 5.15 2.53 7.15 2.70 0.00 8.50 9.42 8.98 7.99 4.92 3.49 2.81 3.32 1.45 3.32 12 E2a_E3c KnownJunction 0 3.78 3.35 8.49 0.00 4.33 2.56 8.52 0.00 0.00 1.67 0.00 11.10 0.00 23.66 19.16 0.00 4.02 4.97 0.00 0.00 0.00 6.00 0.00 13 E3_Aa NovelBoundary 0 190.18 123.27 109.31 87.10 187.95 148.04 81.52 107.49 76.56 96.14 84.76 61.82 71.75 152.22 259.35 155.60 64.05 66.49 88.76 45.96 122.07 46.35 90.48 14 ER3a ExonRegion 0 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 0.00 0.00 15 E3_Ab KnownBoundary 0 289.90 196.41 115.79 105.58 307.47 854.39 297.66 106.46 71.01 71.26 79.39 316.75 258.42 349.17 226.10 295.31 128.00 33.33 154.73 132.44 73.27 219.28 128.98 16 E3_Ac KnownBoundary 0 58.53 67.62 91.16 55.37 70.12 114.31 72.78 77.14 63.86 73.66 61.91 47.72 53.24 56.27 39.68 65.79 49.37 61.27 22.49 18.09 64.37 25.35 11.10 17 ER3b ExonRegion 0 10.76 0.17 0.51 0.00 0.22 0.46 0.44 0.00 0.00 0.00 0.00 0.36 0.00 1.49 1.21 0.25 0.28 0.31 0.00 0.18 0.00 0.35 0.00 18 ER3c ExonRegion 0 8.08 1.90 4.03 0.00 0.69 1.76 4.71 0.12 0.83 3.08 10.48 2.75 0.00 13.26 14.28 3.43 12.31 1.81 1.56 2.60 0.83 1.28 5.48 19 E3_Da KnownBoundary 0 112.98 90.31 193.07 70.79 68.08 92.16 34.49 138.83 146.67 187.25 83.55 64.97 99.83 92.71 114.84 97.50 67.51 76.15 34.54 48.07 106.57 48.74 46.78 20 E3a_E4a KnownJunction 0 3.56 9.60 4.79 1.66 0.00 4.83 5.70 0.00 1.42 4.06 2.47 12.60 0.00 11.95 14.83 7.01 22.63 2.07 0.00 3.26 0.00 0.00 0.00 21 ER3d ExonRegion 0 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.00 0.00 22 E3_Db NovelBoundary 0 276.57 183.91 316.75 255.21 265.70 365.24 229.78 331.02 238.39 307.62 321.82 267.39 427.08 500.56 486.19 606.34 291.16 174.81 380.53 204.15 356.58 349.58 253.36 23 Ix Intron 0 12.21 0.73 3.95 1.83 7.72 2.31 8.11 6.50 7.63 3.70 3.83 1.93 2.24 6.54 7.50 15.00 8.33 4.47 2.87 6.52 2.78 1.50 4.76 24 Ix_AR1 ActiveIntronRegion 0 12.28 0.74 3.98 1.84 7.77 2.33 8.17 6.54 7.68 3.72 3.86 1.94 2.25 6.59 7.56 15.10 8.39 4.50 2.89 6.56 2.80 1.51 4.80 25 E4_Aa NovelBoundary 0 281.31 213.19 180.51 133.48 236.93 288.30 131.38 142.77 175.75 173.88 213.42 146.00 208.91 229.09 277.15 280.61 100.89 119.30 142.69 113.90 287.08 112.30 122.50 26 ER4a ExonRegion 0 32.05 15.88 15.51 11.86 15.42 17.29 18.27 16.34 10.82 7.85 18.27 17.42 9.77 27.44 28.60 21.87 24.36 14.52 3.91 17.48 10.28 11.53 7.90 27 E4_Da KnownBoundary 0 33.19 6.38 9.17 10.99 7.22 34.81 49.15 14.75 11.31 6.85 6.90 0.00 6.98 7.36 15.70 32.13 21.79 8.46 8.47 16.75 19.34 10.59 0.00 28 E4a_E5a KnownJunction 0 7.56 0.00 4.91 3.36 0.00 2.67 0.00 2.34 1.79 4.08 14.85 13.20 0.00 20.90 19.90 0.00 32.35 9.37 4.24 11.38 8.83 10.23 0.00 29 ER4b ExonRegion 0 17.46 7.18 4.21 11.58 18.92 13.97 22.05 17.20 13.78 7.57 6.30 2.15 11.79 9.78 18.04 32.73 10.68 8.39 11.78 12.11 13.33 6.20 20.28 30 E4_Db NovelBoundary 0 28.00 0.00 1.09 0.00 8.23 26.46 6.27 3.45 8.91 9.83 5.05 6.30 0.00 4.53 10.51 15.64 7.57 3.36 3.58 2.56 2.97 8.57 4.01 31 Ix Intron 0 34.67 2.51 1.69 3.77 9.10 9.07 8.59 6.37 5.12 3.17 2.39 2.20 4.78 3.90 3.43 12.86 6.12 4.84 8.86 2.63 6.13 2.58 6.35 32 Ix_AR1 ActiveIntronRegion 0 37.86 3.14 1.95 4.86 11.45 8.19 10.33 8.46 7.64 3.97 2.53 3.70 7.30 5.21 3.89 11.61 9.19 5.66 10.18 4.47 7.54 3.31 3.51 33 ER5a ExonRegion 0 12.99 2.90 10.78 7.62 9.20 4.25 9.68 3.08 4.18 11.06 18.40 10.44 11.37 22.80 23.05 20.76 29.08 6.71 1.75 2.65 5.31 6.71 5.67 34 E5_Da KnownBoundary 0 7.04 0.00 19.40 10.42 16.38 8.57 3.53 2.55 7.78 14.24 19.43 6.30 0.00 14.48 13.35 6.41 18.23 8.91 0.00 3.26 0.00 3.12 13.66 35 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 2.63 6.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 2.72 0.00 0.00 36 ER5b ExonRegion 0 11.46 7.61 16.18 18.20 23.23 10.45 23.22 18.71 14.51 6.39 11.92 18.30 19.36 14.57 17.56 21.99 13.15 5.82 7.56 3.57 3.63 7.49 8.87 37 E5_Db NovelBoundary 0 28.38 37.56 26.29 20.18 27.33 8.46 35.46 22.51 11.78 12.11 9.16 43.36 50.48 28.96 22.25 14.61 8.51 9.49 20.33 17.51 11.61 11.21 7.09 38 E6_Aa NovelBoundary 0 34.30 8.49 17.33 12.15 22.58 10.90 12.23 23.25 16.55 5.35 7.42 12.00 19.64 7.06 19.66 27.60 4.02 18.65 10.64 12.14 24.22 10.16 18.87 39 ER6a ExonRegion 0 13.91 13.50 5.97 5.22 17.29 12.26 21.13 3.69 5.92 4.44 8.61 25.76 10.51 9.34 18.99 24.85 18.26 12.10 7.48 13.69 11.58 9.27 22.66 40 E6_Da KnownBoundary 0 596.92 635.48 1048.31 1423.53 683.28 393.92 737.69 1235.18 1043.02 1056.08 231.85 112.09 148.04 93.59 244.27 538.92 432.16 1346.99 429.09 549.24 210.41 245.12 441.58 41 ER6b ExonRegion 0 9.44 3.01 3.97 7.75 10.48 7.35 6.91 6.70 7.73 6.42 5.03 11.48 9.68 6.04 20.84 12.26 17.74 8.16 8.69 6.94 5.13 2.49 9.13