Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	ZYG11A	Gene	0	4.90	4.09	4.03	1.79	4.59	12.61	25.49	1.74	2.80	2.58	2.10	10.15	17.40	10.70	7.18	4.94	23.96	4.11	3.74	5.13	4.60	2.01	4.98
2	401049	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	371529	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	371532	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	371528	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	0	0.46	0.00	0.00	0.00	0.41	7.10	8.68	0.00	0.72	0.00	0.00	0.00	2.59	1.93	0.00	0.00	6.28	0.00	0.00	0.00	0.95	0.45	1.50
9	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	8.32	0.00	3.97	0.00	1.24	0.00	0.00	0.00	20.45	7.83	0.00	0.00	16.46	0.00	0.00	0.00	0.00	0.00	4.27
10	ER2a	ExonRegion	0	0.00	0.00	1.11	0.24	1.89	4.65	9.29	0.00	0.68	0.67	0.00	3.76	12.88	7.93	0.00	0.00	19.27	0.68	0.00	0.17	4.09	0.64	1.93
11	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	1.96	0.00	0.00	16.91	0.00	0.00	1.53	0.00	5.40	21.43	9.12	0.00	0.00	33.10	1.78	0.00	0.00	0.00	0.00	4.35
12	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	4.46	0.00	0.00	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.81	0.00	0.00	0.00
13	ER3a	ExonRegion	0	0.90	0.14	1.81	0.22	2.81	10.81	21.74	0.35	1.33	0.97	0.00	2.28	20.72	10.35	0.28	0.00	31.23	0.54	0.00	1.15	2.22	1.12	1.09
14	E3a_E4a	KnownJunction	0	3.41	0.00	1.83	0.00	4.33	19.02	21.77	0.00	1.77	0.00	0.00	0.00	0.00	20.31	0.00	0.00	23.94	0.00	0.00	0.00	0.00	0.00	0.00
15	ER4a	ExonRegion	0	0.54	0.00	3.95	0.00	0.49	23.06	22.04	0.00	0.99	0.83	0.00	2.86	15.43	12.19	0.74	0.00	28.87	0.00	0.00	0.68	7.92	1.12	0.00
16	E4a_E5a	KnownJunction	0	0.00	0.00	1.83	0.00	0.00	0.00	8.39	0.00	1.24	0.00	0.00	0.00	0.00	11.71	0.00	0.00	17.95	0.00	0.00	2.43	11.68	3.12	0.00
17	E4a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.30	0.00	2.77	0.00	0.00	12.44	0.00	0.00	0.00	0.00	0.00	0.00
18	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	18.59	0.00	1.74	0.00	0.00	0.00	12.66	0.00	0.00	0.00	21.97	0.00	0.00	0.00	0.00	0.00	0.00
19	ER5a	ExonRegion	0	0.00	0.86	1.97	0.59	3.08	11.67	20.84	0.00	0.45	0.00	0.51	7.19	12.75	9.46	0.59	0.00	30.16	0.79	0.00	1.14	7.01	0.97	0.85
20	E5a_E6a	KnownJunction	0	0.00	3.35	2.63	0.00	0.00	18.40	35.02	0.00	0.00	0.00	0.00	18.91	0.00	2.47	0.00	4.19	21.60	0.00	0.00	0.00	5.81	0.00	0.00
21	ER6a	ExonRegion	0	0.36	1.28	2.39	0.00	0.00	13.23	32.65	0.00	0.97	0.00	0.59	15.52	0.22	7.52	0.00	0.46	27.58	0.00	0.00	0.88	7.09	1.63	0.00
22	E6_Da	NovelBoundary	0	3.63	0.00	1.39	0.00	0.00	0.00	8.61	0.00	0.00	0.00	0.00	19.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E6a_E7a	KnownJunction	0	3.11	2.96	0.00	0.00	0.00	2.27	22.96	0.00	1.62	0.00	2.47	12.45	0.00	16.78	0.00	3.50	15.80	0.00	0.00	3.26	0.00	0.00	0.00
24	ER7a	ExonRegion	0	2.20	0.75	2.38	0.00	0.00	13.17	21.53	0.59	3.83	0.00	2.49	11.30	10.27	14.23	0.00	1.22	36.01	1.44	0.00	1.60	2.89	1.06	3.00
25	E7a_E8a	KnownJunction	0	3.26	0.00	4.76	0.00	0.00	8.57	13.03	2.55	2.29	0.00	2.05	12.60	6.82	14.48	0.00	0.00	45.82	4.31	0.00	0.00	3.15	0.00	0.00
26	ER8a	ExonRegion	0	1.58	0.84	2.62	0.00	0.00	3.16	9.55	1.42	0.61	0.00	0.61	21.82	2.76	17.90	0.00	0.00	23.88	2.57	0.00	0.00	4.45	0.00	0.00
27	E8a_E9a	KnownJunction	0	0.00	3.35	0.00	0.00	0.00	2.67	8.17	0.00	0.00	0.00	0.00	0.00	0.00	14.95	0.00	0.00	15.90	0.00	0.00	0.00	4.70	0.00	0.00
28	ER9a	ExonRegion	0	0.39	0.38	2.67	0.00	0.40	10.81	22.09	0.66	2.27	0.52	1.12	16.62	23.57	15.76	0.00	1.87	22.09	0.03	0.00	0.67	2.34	0.66	3.63
29	E9_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	6.45	0.00	0.00	0.00	0.00	0.00	6.49	0.00	0.00	0.00	16.83	0.00	0.00	0.00	2.66	0.00	0.00
30	E9a_E10a	KnownJunction	0	3.78	0.00	1.77	0.00	4.33	2.84	3.58	1.85	0.00	0.00	0.00	7.50	6.82	9.36	0.00	0.00	13.28	0.00	0.00	0.00	0.00	0.00	0.00
31	ER10a	ExonRegion	0	0.99	0.00	1.39	0.00	1.61	8.23	2.97	0.54	1.04	0.33	0.34	2.12	8.44	8.91	0.00	0.00	12.69	0.00	0.00	0.00	0.10	0.00	0.26
32	E10_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	9.63	0.00	0.00	1.67	2.32	0.00	13.96	4.83	0.00	0.00	22.07	0.00	0.00	0.00	0.00	0.00	0.00
33	E10a_E11a	KnownJunction	0	0.00	0.00	1.57	0.00	0.00	2.38	4.33	0.00	1.79	1.10	2.05	0.00	12.82	14.48	0.00	0.00	13.65	0.00	0.00	0.00	0.00	0.00	0.00
34	I10	Intron	0	1.98	0.25	2.00	0.00	0.87	2.61	17.49	0.00	0.90	0.21	0.31	3.55	12.22	2.65	0.36	0.00	9.26	0.11	0.13	0.00	0.36	0.08	0.48
35	I10_SR1	SilentIntronRegion	0	2.64	0.13	2.28	0.00	1.00	2.06	19.79	0.00	0.80	0.11	0.36	3.25	11.84	2.50	0.55	0.00	8.02	0.00	0.00	0.00	0.27	0.00	0.37
36	I10_AR1	ActiveIntronRegion	0	0.96	0.61	1.92	0.00	0.81	3.04	15.58	0.00	1.11	0.52	0.29	4.84	13.65	3.78	0.00	0.00	14.93	0.42	0.48	0.00	0.66	0.31	0.89
37	ER11a	ExonRegion	0	1.40	0.53	3.79	0.53	0.00	15.14	21.90	0.67	1.74	1.44	1.45	12.63	24.15	11.59	0.00	0.78	37.83	1.15	0.00	0.00	3.03	2.18	2.30
38	E11a_E12a	KnownJunction	0	3.78	0.00	4.73	0.00	0.00	5.39	9.14	0.00	3.41	1.56	0.00	0.00	34.58	13.77	0.00	0.00	42.82	1.53	0.00	0.00	6.18	0.00	0.00
39	ER12a	ExonRegion	0	0.82	0.00	3.89	0.09	2.20	4.91	15.46	0.00	1.35	1.48	2.84	11.17	19.44	5.84	1.68	0.00	35.94	1.01	0.00	0.00	3.80	3.09	0.00
40	E12a_E13a	KnownJunction	0	0.00	0.00	2.57	0.00	0.00	9.43	8.48	0.00	0.00	1.67	2.16	6.00	26.62	4.89	0.00	0.00	9.44	2.45	0.00	0.00	3.03	8.94	0.00
41	ER13a	ExonRegion	0	0.26	0.00	2.44	1.00	0.74	10.10	34.42	0.00	0.47	2.89	1.81	14.62	13.78	9.60	2.58	0.00	30.68	3.66	0.00	0.00	6.36	1.30	0.00
42	E13a_E14a	KnownJunction	0	3.19	0.00	2.81	0.00	4.33	15.50	36.26	0.00	1.79	1.53	2.68	12.60	0.00	9.89	0.00	0.00	23.28	0.00	0.00	0.00	5.50	0.00	0.00
43	E14_Aa	NovelBoundary	0	0.00	0.00	5.50	3.50	15.45	0.00	17.71	0.00	1.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.65	0.00	0.00	0.00	0.00	0.00	0.00
44	ER14a	ExonRegion	0	8.63	7.29	4.30	1.33	7.22	21.39	37.56	1.43	1.07	0.89	3.03	15.43	24.18	14.95	14.13	9.00	26.63	3.77	7.72	10.10	7.13	4.00	10.23
45	E14_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	14.03	6.27	0.00	0.00	0.00	2.47	0.00	0.00	4.71	4.45	0.00	3.83	0.00	0.00	0.00	0.00	0.00	0.00
46	E14a_E14b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER14b	ExonRegion	0	37.85	39.17	22.43	22.41	26.26	26.06	52.52	23.79	28.28	31.15	14.06	31.67	39.68	27.61	57.43	46.56	33.36	52.17	35.85	42.76	18.36	8.79	34.20
48	E14_Ab	KnownBoundary	0	138.02	54.86	188.28	131.78	47.45	50.08	77.11	128.23	129.37	133.29	18.32	12.30	25.81	40.38	53.53	196.79	46.66	196.57	119.91	79.51	28.79	58.66	120.62
49	ER14c	ExonRegion	0	3.19	1.31	4.40	0.88	4.34	6.73	25.95	0.00	2.14	1.68	2.10	9.91	12.40	6.15	4.31	1.76	17.07	0.66	0.69	1.60	2.08	0.79	1.42
50	ER14d	ExonRegion	0	0.60	0.00	2.10	0.00	0.00	0.00	1.51	0.00	0.00	0.00	0.00	0.62	4.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	IG25	Intergenic	0	4.84	0.69	2.94	0.86	2.95	6.68	17.61	1.75	1.72	0.72	1.80	4.25	10.48	5.28	1.01	3.27	14.82	0.70	1.08	0.54	2.43	3.18	3.48
52	IG25_SR1	SilentIntergenicRegion	0	1.89	0.23	2.04	0.45	2.09	7.16	18.77	1.44	1.85	0.57	2.16	2.73	10.32	4.61	1.33	1.99	16.95	0.62	0.71	0.47	1.48	1.40	2.62
53	IG25_AR1	ActiveIntergenicRegion	0	14.24	2.16	5.80	2.16	5.69	5.20	14.06	2.74	1.30	1.21	0.68	9.11	11.04	7.44	0.00	7.37	8.18	0.98	2.26	0.75	5.46	8.85	6.24