Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ACOT11 Gene 0 8.80 8.24 12.69 13.95 8.60 15.53 10.15 14.65 24.89 18.25 3.51 7.35 6.95 7.37 8.59 6.03 6.35 19.79 16.36 10.25 7.23 4.81 11.95 2 481208 Transcript 0 0.20 0.00 1.26 0.00 0.00 0.00 0.25 0.24 0.68 3.72 3.12 0.00 0.00 0.00 0.00 0.00 0.62 6.56 7.48 1.60 2.96 1.16 5.74 3 498228 Transcript 0 1.22 1.32 0.98 0.66 0.64 1.59 1.77 1.40 0.98 2.28 0.33 0.98 1.40 0.73 2.21 1.13 0.96 2.21 1.18 1.92 1.07 1.00 2.38 4 343744 Transcript 0 3.19 1.30 5.40 3.01 2.02 2.26 2.18 7.45 7.11 11.75 0.49 0.90 0.00 0.00 0.00 0.00 1.38 16.68 14.15 4.67 6.37 6.76 4.47 5 371316 Transcript 0 5.99 6.60 12.72 11.42 5.96 15.10 5.62 14.86 34.81 17.50 3.61 4.14 4.68 10.32 6.02 7.68 7.89 14.36 13.87 5.39 6.73 1.38 8.02 6 479837 Transcript 0 0.90 3.38 5.28 5.17 1.68 6.26 4.17 7.85 7.72 12.43 0.41 0.00 0.00 0.00 0.00 0.00 0.00 11.80 16.04 5.88 2.31 3.52 7.40 7 492752 Transcript 0 0.60 0.38 0.66 0.53 0.00 0.36 0.55 0.25 2.01 2.10 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.03 1.83 0.63 0.85 0.42 1.13 8 ER1a ExonRegion 0 0.60 0.00 0.90 0.00 0.00 0.00 0.75 0.73 0.52 1.49 2.03 0.00 0.00 0.00 0.00 0.00 1.86 5.08 4.28 1.55 3.14 0.35 4.33 9 E1a_E4a KnownJunction 0 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 4.67 7.32 0.00 0.00 0.00 0.00 0.00 0.00 11.19 8.66 3.26 5.75 3.12 12.89 10 E2_Ab NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 0.00 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 0.00 2.39 15.11 11 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.02 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.73 2.08 0.00 12 ER2b ExonRegion 0 2.84 0.91 1.85 1.73 0.00 36.08 1.17 1.83 15.27 5.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.52 17.85 2.86 7.08 2.92 5.26 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E2a_E4a KnownJunction 0 0.00 0.00 1.39 1.27 0.00 0.00 0.00 2.55 8.48 9.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.56 4.80 0.00 0.00 2.88 0.00 15 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 2.45 0.44 0.86 0.00 3.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.29 1.06 0.71 1.47 0.69 0.83 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.33 17 ER4a ExonRegion 0 1.04 0.50 4.38 3.43 0.66 6.20 2.26 6.33 17.25 14.21 1.38 0.00 0.00 0.00 0.50 0.00 2.14 25.31 19.10 5.40 7.13 4.37 11.48 18 E4_Da NovelBoundary 0 0.00 0.00 3.31 2.06 0.00 0.00 0.00 0.00 0.00 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 13.65 3.20 0.00 0.00 0.00 19 E4a_E5a KnownJunction 0 0.00 0.00 1.60 1.50 0.00 30.27 0.00 10.84 21.04 13.14 2.58 0.00 0.00 0.00 0.00 0.00 4.11 11.19 8.00 6.39 3.15 10.84 7.60 20 E4a_E6a KnownJunction 0 0.00 0.00 1.39 0.00 0.00 0.00 0.00 0.00 1.53 5.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.40 9.51 0.00 0.00 0.00 0.00 21 ER5a ExonRegion 0 0.85 1.68 0.19 2.45 0.00 43.25 0.64 4.94 21.33 13.89 0.50 0.00 0.00 0.00 0.00 0.00 0.85 17.53 12.33 1.64 8.72 5.98 13.72 22 E5a_E6a KnownJunction 0 3.78 6.45 1.24 4.76 0.00 28.45 2.12 2.05 21.01 17.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.03 16.75 0.00 11.74 5.45 12.04 23 ER6a ExonRegion 0 0.80 5.63 4.54 3.91 0.00 13.47 2.56 3.32 26.46 21.36 0.76 0.00 0.00 0.00 0.00 0.00 0.76 27.66 15.30 1.08 8.24 3.79 11.31 24 E6a_E7a KnownJunction 0 0.00 3.35 6.80 3.96 0.00 13.51 0.00 4.56 33.77 24.01 2.68 0.00 0.00 0.00 0.00 0.00 4.21 28.19 13.08 3.26 5.44 5.57 12.38 25 ER7a ExonRegion 0 2.93 0.58 5.06 6.51 1.38 9.61 2.29 8.38 29.68 18.27 1.80 0.00 0.00 0.69 0.00 0.00 1.23 34.81 18.34 2.39 11.78 6.52 12.58 26 E7a_E8a KnownJunction 0 10.89 0.00 9.31 11.95 0.00 13.00 4.11 10.39 24.36 21.46 2.00 0.00 0.00 0.00 0.00 0.00 0.00 57.70 45.37 2.81 20.02 8.21 29.02 27 ER8a ExonRegion 0 3.00 1.05 7.57 7.11 0.33 9.60 3.37 11.55 24.77 21.77 3.99 0.00 0.00 0.00 1.09 0.00 0.00 49.05 25.65 8.34 13.48 6.69 15.91 28 E8a_E9a KnownJunction 0 3.70 3.29 14.40 3.76 4.07 28.51 4.06 21.11 26.79 40.62 5.37 0.00 0.00 0.00 0.00 0.00 0.00 58.99 30.31 12.14 10.44 8.51 12.04 29 ER9a ExonRegion 0 4.23 2.03 10.21 3.18 2.68 18.34 2.65 15.56 28.20 36.13 3.87 0.00 0.00 1.08 0.00 0.00 0.00 60.98 33.98 12.77 16.53 8.33 8.81 30 ER9b ExonRegion 0 2.35 4.11 10.91 5.16 3.07 16.86 3.95 12.92 29.00 33.82 1.29 0.00 0.00 1.19 0.00 0.00 2.56 55.05 32.49 7.58 12.55 9.44 19.25 31 E9_Da KnownBoundary 0 0.00 2.57 3.13 0.00 0.00 0.00 0.00 2.14 0.00 2.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 2.53 0.00 8.19 32 E9a_E10a KnownJunction 0 2.96 3.35 4.44 3.86 3.31 10.62 8.61 6.90 19.76 29.09 0.00 0.00 0.00 2.30 0.00 0.00 4.30 68.94 44.71 9.97 14.83 23.15 15.62 33 ER9c ExonRegion 0 6.12 6.61 4.89 3.30 3.22 4.47 8.28 6.14 4.88 6.58 1.64 4.92 7.02 3.66 11.07 5.67 4.78 6.77 4.84 8.88 3.13 2.21 7.75 34 E9_Db NovelBoundary 0 34.30 5.85 19.84 12.62 15.70 8.46 14.75 25.92 6.74 14.48 4.58 14.10 6.66 0.00 5.81 16.75 0.00 19.65 8.85 8.76 16.49 5.88 3.84 35 ER10a ExonRegion 0 2.20 1.39 10.62 4.04 1.32 18.52 3.44 10.39 26.80 30.65 0.13 0.00 0.00 0.91 0.00 0.00 2.67 48.64 17.78 9.33 10.10 14.25 19.09 36 E10_Da KnownBoundary 0 7.56 0.00 9.88 3.83 0.00 5.34 0.00 4.03 3.56 14.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.51 0.00 0.00 0.00 0.00 0.00 37 E10a_E11a KnownJunction 0 3.78 0.00 9.61 3.30 8.32 25.61 3.93 5.01 21.99 19.47 2.05 0.00 0.00 0.00 0.00 0.00 3.83 18.74 0.00 0.00 8.96 10.72 11.18 38 ER10b ExonRegion 0 0.90 3.38 5.28 5.17 1.68 6.26 4.17 7.85 7.72 12.43 0.41 0.00 0.00 0.00 0.00 0.00 0.00 11.80 16.04 5.88 2.31 3.52 7.40 39 E10_Db NovelBoundary 0 0.00 3.03 11.97 1.43 0.00 2.10 2.21 5.67 5.03 12.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.55 8.85 9.72 0.00 3.06 0.00 40 E11_Aa NovelBoundary 0 0.00 0.00 4.91 9.19 0.00 5.79 2.16 6.16 11.34 16.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.34 17.13 5.75 0.00 5.63 0.00 41 ER11a ExonRegion 0 4.55 1.43 11.21 5.61 3.76 17.24 4.46 7.94 30.48 29.26 0.71 0.00 0.00 0.31 0.00 0.00 2.75 35.78 16.65 5.72 11.43 8.20 15.45 42 E11a_E12b KnownJunction 0 3.78 0.00 16.79 3.60 0.00 28.85 0.00 6.20 31.65 18.40 2.16 0.00 0.00 0.00 0.00 0.00 4.77 19.28 0.00 8.88 8.71 5.63 11.61 43 ER12a ExonRegion 0 0.60 0.38 0.66 0.53 0.00 0.36 0.55 0.25 2.01 2.10 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.03 1.83 0.63 0.85 0.42 1.13 44 E12_Ab KnownBoundary 0 0.00 0.00 1.71 1.76 0.00 0.00 0.00 0.00 1.45 4.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.44 4.05 0.00 0.00 0.00 0.00 45 ER12b ExonRegion 0 4.27 0.00 19.90 6.99 0.29 12.17 5.42 6.00 29.46 21.52 2.85 0.00 0.00 0.00 0.00 0.00 5.70 26.44 5.04 14.55 12.74 10.87 20.08 46 E12a_E13a KnownJunction 0 18.89 0.00 15.35 7.59 0.00 13.57 3.53 8.75 29.46 24.93 5.37 0.00 0.00 0.00 0.00 0.00 4.58 48.42 7.81 23.14 16.80 12.25 23.73 47 ER13a ExonRegion 0 6.63 0.52 16.90 6.69 2.08 7.88 2.41 13.57 30.62 29.49 1.76 0.00 0.00 0.00 0.00 0.00 4.93 50.63 25.63 11.75 18.72 14.43 17.09 48 E13a_E14a KnownJunction 0 6.74 2.96 17.98 3.50 3.23 16.47 0.00 12.69 37.90 31.89 0.00 0.00 0.00 0.00 0.00 0.00 4.77 53.85 17.04 3.07 10.50 14.88 8.02 49 ER14a ExonRegion 0 6.25 2.52 16.81 11.75 2.68 21.22 2.40 11.19 41.82 36.43 0.00 0.00 0.00 0.77 0.00 0.00 3.30 61.24 15.78 4.66 7.77 16.87 11.05 50 ER14b ExonRegion 0 6.48 3.65 21.18 14.60 0.98 14.06 3.97 9.47 45.11 39.80 2.30 1.92 0.00 0.82 0.00 0.00 6.81 53.26 24.17 16.18 11.79 12.63 12.91 51 E14_Db NovelBoundary 0 3.19 0.00 1.51 0.00 0.00 0.00 0.00 0.00 1.62 8.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 9.41 0.00 0.00 0.00 10.67 52 E14b_E15a KnownJunction 0 0.00 0.00 23.62 9.02 0.00 8.01 7.95 8.30 38.86 43.46 7.58 13.20 0.00 0.00 0.00 0.00 7.95 55.13 34.64 15.28 15.57 18.61 20.74 53 ER15a ExonRegion 0 3.62 1.34 22.81 13.38 4.37 14.67 1.52 16.47 37.82 34.60 2.60 2.10 0.00 0.23 0.00 0.00 4.58 66.05 38.13 12.51 17.93 18.89 25.77 54 E15a_E16a KnownJunction 0 3.78 2.76 16.44 21.71 3.90 9.99 3.89 11.25 54.57 37.34 0.00 0.00 0.00 2.47 0.00 0.00 8.98 92.36 30.21 17.96 29.59 19.59 22.88 55 E16_Aa NovelBoundary 0 0.00 2.96 0.00 0.00 0.00 7.10 1.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.59 13.27 6.33 0.00 0.00 4.27 56 ER16a ExonRegion 0 4.83 2.40 18.01 10.92 0.73 23.26 1.91 10.84 39.33 34.06 3.73 1.51 0.00 0.80 0.00 0.00 2.78 66.77 31.37 9.30 16.79 13.45 20.38 57 E16a_E17a KnownJunction 0 13.41 5.99 17.53 11.05 0.00 32.42 1.90 16.02 44.07 34.49 0.00 12.60 0.00 0.00 0.00 0.00 3.93 74.57 29.55 12.14 28.54 22.35 56.34 58 ER17a ExonRegion 0 4.85 4.21 16.34 8.35 3.22 21.20 3.69 15.64 26.24 39.74 0.82 4.16 0.00 0.54 0.00 0.00 2.42 59.71 26.29 6.73 16.68 12.89 29.92 59 E17a_E18a KnownJunction 0 3.19 0.00 9.08 0.00 0.00 15.67 1.68 2.55 9.17 11.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37.56 16.28 0.00 11.80 20.45 20.83 60 E17a_E19a KnownJunction 0 3.19 0.00 2.66 9.09 0.00 14.14 0.00 6.98 19.68 11.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.01 8.66 3.20 8.65 0.00 8.11 61 E18_Aa NovelBoundary 0 0.00 0.00 2.66 1.30 0.00 0.00 0.00 0.00 4.28 6.37 0.00 7.35 0.00 0.00 0.00 0.00 0.00 15.79 4.05 3.26 3.15 0.00 12.46 62 ER18a ExonRegion 0 3.54 1.38 8.73 3.24 2.37 10.21 2.44 10.32 19.39 25.00 0.00 5.16 0.00 0.39 0.00 0.88 5.19 47.50 14.55 5.51 15.67 11.94 18.50 63 E18_Ab KnownBoundary 0 10.59 2.96 8.34 2.00 0.00 15.56 2.25 8.13 20.28 21.52 0.00 0.00 0.00 0.00 0.00 0.00 8.42 40.38 4.14 8.31 16.80 20.08 23.47 64 ER18b ExonRegion 0 2.51 1.36 5.93 4.51 0.97 7.86 1.81 5.59 10.77 14.40 0.00 0.06 0.00 0.00 0.00 0.00 0.97 23.54 9.66 3.93 6.05 6.60 10.24 65 E18_Da KnownBoundary 0 0.00 0.00 3.40 1.80 0.00 2.78 0.00 0.00 1.10 4.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.27 0.00 0.00 0.00 2.51 0.00 66 ER18c ExonRegion 0 1.06 0.79 1.07 1.95 0.00 3.11 0.90 2.67 2.60 4.53 0.14 0.00 0.00 0.00 0.00 0.00 0.31 5.59 3.26 0.95 1.18 2.10 1.67 67 E18_Db KnownBoundary 0 0.00 5.92 6.92 3.43 0.00 5.34 2.25 11.42 7.78 27.80 0.00 0.00 0.00 0.00 0.00 0.00 8.88 9.04 21.84 3.13 5.68 14.82 7.09 68 ER18d ExonRegion 0 3.19 1.30 5.40 3.01 2.02 2.26 2.18 7.45 7.11 11.75 0.49 0.90 0.00 0.00 0.00 0.00 1.38 16.68 14.15 4.67 6.37 6.76 4.47 69 E19_Aa NovelBoundary 0 29.41 32.03 44.68 53.57 14.01 19.42 18.11 19.51 29.28 21.68 6.74 13.50 0.00 0.00 0.00 0.00 4.21 26.41 12.71 19.88 2.66 0.00 3.67 70 ER19a ExonRegion 0 4.77 2.47 5.90 5.93 2.87 12.33 1.58 7.07 28.87 14.46 2.54 1.87 5.24 19.28 3.72 2.97 16.18 18.68 15.59 1.95 3.47 0.69 3.84 71 E19_Da NovelBoundary 0 0.00 0.00 7.10 16.51 16.38 0.00 1.85 9.78 12.99 13.46 2.42 0.00 0.00 0.00 0.00 0.00 4.49 31.55 8.47 0.00 2.59 0.00 3.76 72 E19a_E20a KnownJunction 0 0.00 8.55 20.79 3.73 3.40 8.69 2.25 19.80 49.74 19.29 5.26 0.00 0.00 7.12 4.45 15.89 4.30 11.69 8.19 0.00 5.87 0.00 4.35 73 E20_Aa NovelBoundary 0 6.89 2.83 3.90 20.58 0.00 0.00 6.05 6.98 13.57 2.44 4.26 0.00 0.00 2.12 6.30 11.45 4.68 4.06 0.00 0.00 0.00 0.00 0.00 74 ER20a ExonRegion 0 16.01 15.39 21.53 26.94 17.57 25.25 18.64 25.60 40.94 25.08 6.65 14.68 13.47 14.87 15.92 11.85 11.07 20.05 23.05 16.43 8.93 4.83 15.78 75 IG9 Intergenic 0 4.63 4.21 13.09 19.00 8.01 18.14 4.52 10.37 25.27 14.03 0.15 0.27 0.00 0.00 0.00 0.00 0.00 7.40 16.49 1.47 4.48 0.72 8.45 76 IG9_SR1 SilentIntergenicRegion 0 4.74 4.30 13.30 19.43 8.13 18.33 4.60 10.62 25.79 14.26 0.15 0.28 0.00 0.00 0.00 0.00 0.00 7.57 16.76 1.50 4.52 0.71 8.61