Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MAGOH Gene 0 181.12 45.79 104.33 62.44 115.49 90.53 97.72 64.12 45.75 84.48 261.57 149.52 104.93 268.91 377.17 171.98 280.08 56.74 81.84 38.73 52.61 69.88 70.84 2 371470 Transcript 0 23.01 6.18 3.79 1.59 9.17 9.52 13.99 1.43 1.68 3.74 19.51 11.67 7.44 13.55 45.53 10.12 25.55 1.01 5.79 2.95 6.40 5.64 5.29 3 462941 Transcript 1 8.40 5.67 14.61 17.18 22.68 27.43 24.97 9.61 14.00 13.84 7.40 24.14 33.97 12.82 12.61 15.78 7.71 7.91 8.93 5.71 6.48 14.75 10.36 4 371466 Transcript 1 0.00 0.00 69.90 55.70 48.39 0.00 7.86 51.34 39.09 64.52 220.32 102.48 55.84 247.22 714.01 415.70 168.40 93.02 127.06 34.77 20.08 102.87 109.01 5 495868 Transcript 0 9.61 6.54 14.33 19.70 40.88 36.53 28.26 27.85 12.76 23.77 12.87 11.59 25.19 22.47 30.14 24.45 20.16 17.02 23.53 8.85 9.71 13.82 19.36 6 ER1a ExonRegion 0 34.38 8.71 4.15 2.26 10.55 15.52 20.19 0.07 1.21 5.19 27.25 0.92 5.78 15.63 68.45 15.18 45.96 1.52 7.27 3.20 12.15 7.97 10.58 7 E1_Ab KnownBoundary 0 11.19 3.35 0.00 0.00 25.89 8.18 22.13 0.00 1.62 1.24 36.01 0.00 12.50 7.48 31.89 4.02 9.35 0.00 3.86 0.00 0.00 3.12 4.35 8 E1_Ac KnownBoundary 1 913.72 167.47 148.34 63.03 226.32 293.64 331.35 65.76 50.46 107.02 458.22 5.25 65.42 296.90 979.42 278.39 819.45 90.95 95.63 40.65 205.10 107.46 140.59 9 ER1b ExonRegion 1 421.19 92.64 69.30 23.62 111.19 178.69 211.25 8.83 20.72 55.18 307.12 4.33 64.62 264.91 1123.11 148.94 591.96 15.60 46.36 24.35 138.10 84.50 101.48 10 ER1c ExonRegion 1 413.58 89.32 168.75 75.56 159.13 189.48 183.73 78.90 77.40 158.20 573.09 112.69 125.31 375.20 674.58 208.97 760.64 72.01 95.86 69.63 153.53 79.45 91.46 11 E1a_E2a KnownJunction 1 374.66 24.07 320.54 101.75 144.82 134.58 71.85 167.95 131.83 256.50 1999.35 127.99 115.58 430.63 463.07 174.57 1976.72 81.87 58.07 102.78 443.99 39.31 50.62 12 I1_AR1 ActiveIntronRegion 0 1.96 1.26 1.13 0.63 3.31 2.83 3.27 2.39 2.28 4.75 2.99 1.10 4.78 7.83 5.06 12.86 7.14 7.10 7.88 1.97 5.45 2.58 15.41 13 E2_Aa NovelBoundary 0 22.23 15.00 16.06 3.40 14.52 2.90 16.12 22.18 4.48 9.08 4.95 7.35 6.82 2.77 18.42 0.00 0.00 2.45 9.51 2.36 2.53 15.12 7.60 14 ER2a ExonRegion 1 345.24 57.60 418.60 180.78 188.03 92.65 93.10 217.52 154.89 325.55 1644.54 344.38 344.04 1172.61 1370.18 889.47 1670.98 267.45 432.51 174.50 285.66 222.65 406.40 15 E2_Da NovelBoundary 0 0.00 3.16 8.31 19.11 12.99 0.00 14.22 33.80 16.32 33.34 13.74 6.30 33.93 15.25 19.04 4.36 18.70 9.33 8.47 7.99 6.30 25.41 8.62 16 E2a_E3b KnownJunction 0 208.19 105.97 385.20 223.31 115.62 81.54 191.36 189.60 133.51 318.69 633.69 281.19 349.81 1343.88 2144.64 1273.26 633.94 351.15 506.56 171.43 101.07 241.26 525.84 17 E2a_E4a KnownJunction 1 0.00 0.00 69.90 55.70 48.39 0.00 7.86 51.34 39.09 64.52 220.32 102.48 55.84 247.22 714.01 415.70 168.40 93.02 127.06 34.77 20.08 102.87 109.01 18 I2 Intron 0 15.58 6.03 6.39 8.57 21.38 22.23 17.71 12.02 7.43 12.43 5.90 18.16 12.58 9.86 7.14 7.47 5.33 4.62 5.72 4.01 2.18 11.04 4.75 19 I2_AR1 ActiveIntronRegion 0 13.10 5.03 11.75 9.05 26.48 29.51 23.27 15.93 6.37 13.96 8.14 19.48 15.91 9.25 6.80 8.83 0.82 5.22 4.73 4.74 2.73 17.02 8.00 20 I2_SR1 SilentIntronRegion 0 17.09 6.63 3.36 8.34 18.57 18.19 14.62 9.85 8.08 11.62 4.66 17.50 10.75 10.26 7.37 6.74 7.95 4.30 6.32 3.62 1.87 7.67 2.91 21 E3_Aa NovelBoundary 0 51.64 12.04 13.33 19.91 35.65 25.72 34.18 46.29 5.90 13.03 4.53 6.30 38.96 20.01 30.04 11.88 18.42 26.70 22.78 2.68 8.83 11.45 12.21 22 ER3a ExonRegion 0 9.61 6.54 14.33 19.70 40.88 36.53 28.26 27.85 12.76 23.77 12.87 11.59 25.19 22.47 30.14 24.45 20.16 17.02 23.53 8.85 9.71 13.82 19.36 23 E3_Ab KnownBoundary 0 10.59 2.50 18.27 26.47 16.38 12.72 30.16 24.52 22.74 39.84 18.64 6.30 13.47 7.42 13.35 12.39 13.09 17.16 18.26 20.01 18.59 11.63 7.94 24 ER3b ExonRegion 0 51.09 60.67 313.46 182.49 346.73 201.20 250.42 193.95 118.34 231.06 501.66 289.80 247.85 871.71 1024.96 702.18 526.58 249.14 303.94 106.89 115.96 170.28 272.33 25 E3_Da KnownBoundary 0 0.00 0.00 20.82 21.91 7.47 18.23 15.99 29.00 21.21 40.32 2.53 6.30 6.82 12.01 13.35 3.50 13.65 18.32 4.33 3.26 8.83 12.92 7.17 26 E3a_E4a KnownJunction 0 0.00 53.41 263.80 129.59 409.68 541.56 554.64 131.97 103.04 183.23 322.92 423.74 245.11 375.60 605.97 184.57 434.69 90.37 69.37 52.80 77.96 73.30 47.04 27 ER3c ExonRegion 1 8.40 5.67 14.61 17.18 22.68 27.43 24.97 9.61 14.00 13.84 7.40 24.14 33.97 12.82 12.61 15.78 7.71 7.91 8.93 5.71 6.48 14.75 10.36 28 E4_Aa NovelBoundary 0 3.78 0.00 34.83 29.03 53.06 35.66 27.25 13.76 7.87 2.69 15.06 18.91 41.23 7.36 40.18 4.19 19.73 8.37 0.00 8.69 2.66 2.76 0.00 29 ER4a ExonRegion 0 181.89 213.60 352.14 215.75 365.13 357.02 338.57 211.70 159.34 249.32 731.33 585.36 330.17 874.83 1290.46 514.36 664.32 158.48 235.18 115.25 112.18 201.42 181.08 30 E4a_E5a KnownJunction 0 587.59 286.66 412.91 231.17 395.76 437.65 318.59 248.95 140.04 254.60 912.86 615.65 361.66 883.81 1165.34 448.34 941.93 128.88 201.79 100.99 146.60 247.14 135.64 31 I4 Intron 0 7.94 6.29 14.66 10.69 27.29 21.84 15.86 7.63 5.09 7.09 5.60 5.68 8.71 6.09 4.23 4.11 4.56 6.53 8.18 2.94 3.92 6.86 5.80 32 I4_SR1 SilentIntronRegion 0 7.26 7.81 11.26 6.40 38.88 32.43 19.97 8.83 5.05 7.03 3.97 5.38 10.51 5.36 3.21 4.89 4.53 6.17 9.17 2.92 4.23 6.57 7.25 33 E5_Aa NovelBoundary 0 54.75 14.73 27.88 35.36 20.54 2.21 5.96 18.81 5.38 13.19 6.90 6.30 12.99 2.30 18.54 0.00 7.76 0.00 0.00 3.07 0.00 6.06 0.00 34 ER5a ExonRegion 0 712.76 96.59 137.69 88.24 203.93 110.40 156.17 88.23 50.97 105.78 363.22 409.54 178.18 408.99 587.87 156.73 344.77 38.18 75.50 45.76 41.22 143.79 47.33 35 E5_Da KnownBoundary 0 3.56 8.62 7.92 3.16 21.05 10.68 14.44 13.88 5.87 4.67 12.69 29.86 0.00 2.41 10.88 8.20 4.30 1.78 0.00 3.20 2.84 5.51 0.00 36 E5_Db KnownBoundary 0 19.93 8.62 2.78 6.19 3.82 2.56 8.13 2.55 1.79 8.73 10.06 6.15 15.91 5.42 16.44 4.10 0.00 0.00 0.00 6.20 0.00 2.94 0.00 37 ER5b ExonRegion 1 53.76 15.86 9.56 6.00 33.71 15.04 35.75 11.06 4.94 9.63 33.63 81.39 22.51 39.63 60.93 15.46 13.86 5.91 6.37 8.94 2.20 9.58 0.00 38 ER5c ExonRegion 0 11.64 3.65 3.42 0.92 7.79 3.51 7.79 2.80 2.14 2.29 11.77 22.41 9.10 11.46 22.61 5.07 5.15 0.49 4.31 2.69 0.65 3.31 0.00