Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RPS8 Gene 0 2131.70 2039.64 4919.35 2480.78 1385.80 1679.77 818.58 1347.19 522.25 1382.83 2431.18 1180.58 623.57 1826.60 2901.89 2005.20 2066.37 688.72 1315.24 438.89 2169.84 1279.91 1120.83 2 497035 Transcript 0 0.83 0.55 0.40 0.00 1.79 4.34 2.26 1.92 0.64 0.33 0.00 2.05 0.00 0.74 0.28 0.98 1.00 0.06 1.15 0.49 1.50 0.00 0.67 3 396651 Transcript 0 16.53 13.10 9.25 0.60 18.38 13.66 17.83 3.49 2.59 2.05 73.37 2.94 4.88 87.82 76.22 73.29 64.30 2.62 9.65 7.98 31.34 9.25 7.75 4 372209 Transcript 1 75.35 25.26 139.88 115.84 4.33 21.35 10.73 44.03 12.70 48.67 168.04 11.70 0.00 66.75 120.40 19.65 114.45 17.29 20.33 37.90 159.32 8.45 0.00 5 470475 Transcript 0 24.31 12.64 42.59 17.45 23.15 30.64 19.89 36.57 18.47 21.10 81.64 22.61 15.94 73.94 68.86 62.63 76.95 28.93 27.04 16.23 36.46 36.36 37.84 6 485390 Transcript 1 49.44 48.83 46.62 27.47 38.16 72.14 27.62 21.59 11.90 23.40 47.11 4.97 2.64 39.11 70.92 44.55 33.45 20.23 20.09 9.12 35.66 16.62 32.15 7 464658 Transcript 1 135.29 38.39 129.64 73.49 55.98 66.09 57.99 98.38 55.18 47.76 160.59 33.60 15.01 138.37 162.93 150.51 111.83 57.50 22.42 27.23 82.07 65.01 81.64 8 484599 Transcript 0 39.92 36.72 100.32 106.08 40.28 100.64 47.13 63.56 23.10 38.20 48.84 25.66 15.39 39.91 50.31 39.09 37.26 21.55 29.39 17.84 34.96 39.72 32.61 9 474582 Transcript 0 144.20 147.29 305.28 146.94 128.03 116.22 93.45 117.53 50.15 106.51 194.93 70.07 30.01 134.16 157.26 115.46 133.15 37.29 49.24 32.70 159.90 82.34 58.19 10 ER1a ExonRegion 0 1.65 1.11 0.81 0.00 3.58 6.25 4.52 1.30 1.28 0.67 0.00 4.10 0.00 1.48 0.56 1.95 1.99 0.13 2.30 0.99 3.01 0.00 1.33 11 E1_Ab KnownBoundary 0 7.48 2.96 10.41 0.00 8.49 17.38 30.52 1.77 2.98 2.82 0.00 0.00 0.00 4.71 0.00 4.36 9.54 1.78 12.42 2.88 0.00 0.00 7.77 12 ER1b ExonRegion 0 3.76 3.50 2.69 0.00 4.46 13.65 10.33 0.58 1.30 1.43 0.38 0.00 0.39 3.74 0.08 2.72 4.86 1.85 1.59 0.89 1.78 0.00 1.39 13 E1_Da KnownBoundary 0 2.96 6.25 4.76 0.00 0.00 11.02 6.32 2.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.68 0.00 0.00 14 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1c ExonRegion 0 16.53 13.10 9.25 0.60 18.38 13.66 17.83 3.49 2.59 2.05 73.37 2.94 4.88 87.82 76.22 73.29 64.30 2.62 9.65 7.98 31.34 9.25 7.75 16 E1b_E2b KnownJunction 1 23004.45 20946.99 6725.52 3600.71 15180.40 27985.99 9579.64 1748.23 718.02 2215.06 10250.28 375.87 399.81 12790.10 26398.86 12704.96 8670.86 3336.58 5165.42 2444.77 8790.73 3307.40 9327.63 17 ER1d ExonRegion 0 107.10 98.02 65.43 3.54 194.26 283.87 158.88 16.94 9.63 16.52 408.23 27.71 35.64 643.15 596.50 388.75 332.07 20.33 58.61 43.83 220.37 70.84 63.43 18 ER1e ExonRegion 1 8402.38 8574.59 3672.55 1916.96 6181.83 11734.23 3869.04 961.10 398.66 1274.94 5271.98 128.90 140.91 5921.39 11188.02 6105.15 4293.72 1942.49 2389.31 1117.50 4460.21 1520.12 4300.45 19 ER2a ExonRegion 0 49.44 48.83 46.62 27.47 38.16 72.14 27.62 21.59 11.90 23.40 47.11 4.97 2.64 39.11 70.92 44.55 33.45 20.23 20.09 9.12 35.66 16.62 32.15 20 E2_Ab KnownBoundary 0 58.53 22.82 71.91 50.48 16.13 24.02 17.67 37.75 24.88 46.77 32.90 28.51 0.00 37.67 29.05 12.82 35.16 29.31 9.22 2.49 31.69 16.47 21.43 21 ER2b ExonRegion 1 8368.67 7948.34 6874.92 3531.83 5555.73 10419.52 3647.63 1883.61 774.57 2220.16 5088.30 321.52 168.40 3624.50 7153.04 5867.99 4137.86 2835.77 2818.33 1106.82 4459.06 1939.85 3995.83 22 E2a_E3a KnownJunction 0 4038.12 1682.99 5673.75 3004.31 1117.57 1111.52 864.44 1277.85 494.15 1333.62 1729.33 835.92 847.35 1104.13 2629.22 1265.91 1700.70 694.26 676.73 437.70 2491.36 959.53 600.70 23 ER3a ExonRegion 1 4383.04 1660.62 11006.28 5169.63 1261.61 1124.16 858.03 2331.51 972.28 2882.06 7704.53 743.15 470.29 2777.77 5082.56 1967.77 6633.40 1007.76 1020.27 1274.46 8013.95 1413.04 1053.37 24 E3_Da KnownBoundary 1 6378.76 2250.65 15028.39 6704.28 1990.58 1293.52 1095.37 3125.04 1336.24 3958.86 14235.87 1096.26 745.41 5061.18 8720.09 2835.67 12454.59 1059.63 1468.56 2438.89 12470.81 1895.24 1537.56 25 E3a_E3d KnownJunction 1 75.35 25.26 139.88 115.84 4.33 21.35 10.73 44.03 12.70 48.67 168.04 11.70 0.00 66.75 120.40 19.65 114.45 17.29 20.33 37.90 159.32 8.45 0.00 26 ER3b ExonRegion 0 9037.10 3675.25 23383.47 10526.90 2087.97 1812.59 963.98 5479.63 2163.69 6065.96 12919.82 3126.67 1723.74 11602.65 20013.47 9478.31 10006.28 3509.68 5384.75 2963.36 10381.82 5243.45 6085.56 27 E3_Db KnownBoundary 0 32.45 27.23 71.76 13.72 19.19 12.78 14.57 35.49 15.28 23.48 62.54 17.71 13.47 130.38 108.17 97.84 51.43 28.48 25.32 26.01 31.38 43.17 81.78 28 E3b_E3d KnownJunction 1 14590.51 5900.46 25176.58 11726.18 1851.70 2312.30 1180.25 6781.49 2585.62 6827.23 7793.92 2241.88 2583.27 9655.82 26196.99 16676.91 5912.94 5242.24 7537.63 2606.29 6758.26 6199.10 10556.34 29 ER3c ExonRegion 0 24.31 12.64 42.59 17.45 23.15 30.64 19.89 36.57 18.47 21.10 81.64 22.61 15.94 73.94 68.86 62.63 76.95 28.93 27.04 16.23 36.46 36.36 37.84 30 E3_Ab KnownBoundary 0 60.75 17.83 47.81 14.85 35.74 40.66 49.64 36.15 31.28 15.79 115.61 19.96 12.82 117.08 134.25 81.26 84.43 51.69 19.01 17.90 61.10 51.19 64.79 31 ER3d ExonRegion 0 77.43 24.08 73.86 35.67 41.73 60.43 46.67 55.03 27.90 30.29 107.07 29.50 23.86 114.79 88.31 104.23 80.97 40.03 34.07 27.08 65.17 59.24 65.10 32 E3_Dc KnownBoundary 0 140.10 37.36 74.13 44.42 44.65 47.64 69.07 77.22 45.43 35.57 106.61 41.71 26.46 125.08 114.47 125.18 96.12 44.98 11.67 18.47 46.58 68.34 64.19 33 E3_Ac KnownBoundary 0 154.25 31.11 126.58 63.10 64.43 77.29 38.38 78.94 38.22 36.99 167.94 19.51 5.84 148.86 212.37 142.70 96.03 41.49 34.45 30.94 83.58 51.37 82.46 34 ER3e ExonRegion 0 135.29 38.39 129.64 73.49 55.98 66.09 57.99 98.38 55.18 47.76 160.59 33.60 15.01 138.37 162.93 150.51 111.83 57.50 22.42 27.23 82.07 65.01 81.64 35 ER3f ExonRegion 0 279.78 113.94 496.03 245.53 70.41 106.65 63.51 184.03 92.02 148.63 298.33 79.62 58.99 313.15 518.33 371.89 204.24 140.92 137.47 62.10 204.57 164.96 227.87 36 E3_Ad KnownBoundary 0 144.77 50.19 94.76 52.84 110.02 60.65 79.93 79.44 48.87 46.47 130.09 49.82 33.76 149.04 120.16 82.46 91.16 49.08 35.30 22.43 111.76 72.32 76.83 37 ER3g ExonRegion 0 9895.22 10507.92 25001.69 11528.89 7766.56 10851.09 4455.26 6773.36 2644.05 6818.52 11365.16 4164.21 2707.56 8628.09 13140.62 8478.39 8741.39 3463.54 4601.22 2252.28 10335.18 4995.33 5046.99 38 E3_Dd KnownBoundary 0 3515.29 16135.42 31475.26 14611.69 11938.12 22062.12 10228.52 7868.51 3057.49 8034.25 12085.22 7653.24 3173.01 9371.05 16253.70 6207.69 9953.80 2406.78 3706.74 2623.16 10634.17 5804.08 3556.40 39 E3d_E4b KnownJunction 0 2.96 48.48 52.81 141.34 27.33 167.80 54.85 60.75 25.29 32.66 22.85 6.30 13.64 18.95 19.04 0.00 13.09 9.78 26.92 11.44 10.56 3.12 8.54 40 ER3h ExonRegion 0 2082.12 14409.86 26169.73 11552.47 8307.63 12428.25 7121.74 7750.16 2989.22 8094.68 12040.99 6543.41 2904.12 8275.64 13508.68 5383.83 9303.96 2215.70 3316.27 2468.08 10932.31 4975.76 2933.25 41 E3e_E4b KnownJunction 0 5517.94 14463.15 28232.12 12664.42 6395.33 7761.33 5080.12 8960.88 3229.51 8945.81 12960.07 4450.15 2311.54 6666.35 12068.39 5444.90 10159.50 2270.32 3337.51 2683.44 12229.82 3996.28 3019.63 42 ER4a ExonRegion 0 144.20 147.29 305.28 146.94 128.03 116.22 93.45 117.53 50.15 106.51 194.93 70.07 30.01 134.16 157.26 115.46 133.15 37.29 49.24 32.70 159.90 82.34 58.19 43 E4_Ab KnownBoundary 0 138.91 37.62 82.91 59.03 115.87 87.45 85.63 61.57 31.25 40.59 87.81 69.92 20.62 90.71 105.57 94.42 52.45 12.89 27.01 23.33 50.47 51.37 54.80 44 ER4b ExonRegion 0 6484.08 6468.09 30756.98 15981.93 5124.82 3532.15 2126.39 9486.99 3452.95 9337.21 14586.34 8918.15 4370.03 11869.61 15820.87 12897.35 12227.81 3483.18 8806.29 2213.61 13186.46 8094.62 6378.35 45 E4_Da KnownBoundary 0 6879.59 4006.52 36376.90 21010.81 2895.08 2733.14 1364.32 10653.17 3687.90 9744.28 13371.86 12065.28 5326.27 12953.80 25219.67 20331.93 12310.60 4534.25 16219.10 2363.02 12987.08 15390.31 9295.70 46 ER4c ExonRegion 0 3745.58 3226.90 30074.54 16822.03 2402.31 2504.14 1180.69 8953.84 3194.89 8556.45 11458.27 9132.91 3945.32 11233.99 18470.69 13664.21 10358.21 3601.66 11942.76 2131.10 10000.91 13412.01 6822.87 47 E4_Db KnownBoundary 0 50.01 18.75 134.35 34.49 66.38 25.95 51.63 40.99 17.16 29.92 47.12 12.60 6.82 63.34 69.60 72.37 40.58 30.14 11.58 21.48 22.80 40.84 48.49 48 E4b_E4c KnownJunction 0 3453.72 3991.13 28192.74 15225.04 3118.08 3018.26 1434.71 8418.62 3019.59 8133.53 11279.75 8488.27 3525.26 7691.43 13407.66 7606.04 10926.12 2403.55 7807.94 2159.12 8703.19 10746.30 4296.41 49 ER4d ExonRegion 0 76.87 24.95 147.84 70.82 53.23 33.49 39.41 66.37 20.91 43.74 74.83 45.01 17.14 60.87 81.59 78.19 61.42 33.32 31.86 24.24 59.36 76.31 56.69 50 E4_Ac KnownBoundary 0 21.86 6.18 76.34 37.56 26.74 2.90 21.73 25.55 9.75 17.14 19.48 0.00 0.00 18.31 48.09 33.84 20.94 12.23 9.04 15.21 14.46 43.41 18.87 51 ER4e ExonRegion 1 7717.94 6525.50 17635.38 8300.94 3927.50 4371.27 2858.96 4969.94 1988.21 5354.26 8414.18 5098.12 2671.86 3024.00 4424.74 3263.02 8498.18 1281.74 2895.06 974.12 8461.28 3567.70 1734.44 52 E4_Dc KnownBoundary 0 16739.86 13862.66 15529.70 8225.56 7374.37 6184.22 5175.60 3877.64 1506.73 3896.14 7299.64 7104.21 3642.46 5676.47 7966.03 5732.85 8967.83 1207.54 5206.74 930.70 9165.72 4428.10 2825.86 53 ER4f ExonRegion 0 18759.66 14544.21 16347.08 11446.89 8958.75 5123.32 3848.55 2917.93 1243.86 2965.73 6591.44 7786.66 4424.12 6014.46 10614.50 11029.44 7198.47 2573.92 9322.13 880.99 5344.05 6382.45 5260.42 54 E4_Dd KnownBoundary 0 1064.11 772.03 618.25 471.34 459.34 359.28 274.07 234.20 67.68 201.92 191.15 338.96 179.53 243.92 434.27 270.19 187.47 82.24 250.92 51.77 102.92 110.28 154.17 55 ER4g ExonRegion 0 229.54 181.55 212.26 169.00 101.68 72.25 60.01 79.38 23.56 66.64 69.73 111.92 66.36 67.77 123.67 84.63 63.29 33.35 54.87 16.86 40.99 28.54 40.75 56 IG19 Intergenic 0 10.57 16.72 23.95 14.37 7.80 10.12 8.41 10.19 6.51 16.54 8.05 11.69 7.32 6.34 21.00 12.37 11.68 6.60 11.94 4.65 9.17 8.24 8.56 57 IG19_AR1 ActiveIntergenicRegion 0 11.83 22.06 31.85 19.57 10.32 13.87 10.38 13.63 8.48 22.46 10.26 14.20 10.21 8.27 25.78 14.32 13.37 8.07 16.53 6.49 12.42 11.72 10.59 58 IG19_AR2 ActiveIntergenicRegion 0 16.93 6.10 9.04 6.47 2.68 0.00 4.80 6.91 3.71 5.59 3.87 8.66 4.69 0.00 10.52 8.92 8.25 8.78 0.00 2.13 0.00 0.26 2.94 59 IG19_SR1 SilentIntergenicRegion 0 19.61 6.10 10.51 5.45 3.80 0.00 6.62 5.09 4.49 6.88 4.37 9.11 1.48 1.28 13.13 15.17 14.07 9.24 0.00 1.23 1.28 0.00 5.87 60 IG19_AR3 ActiveIntergenicRegion 0 18.14 7.84 10.68 4.67 5.35 3.67 9.27 3.46 4.94 6.23 7.73 15.46 0.00 2.55 27.35 16.13 21.69 9.24 0.00 0.00 3.78 0.00 10.49