Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HIVEP3 Gene 0 12.47 7.65 39.49 12.20 17.96 39.57 24.76 37.79 66.70 53.86 49.39 13.86 26.76 18.11 19.53 27.72 46.32 51.35 6.74 32.55 20.46 10.29 12.24 2 489103 Transcript 0 0.91 0.00 1.38 0.00 0.03 0.89 0.00 0.00 0.00 0.00 1.24 0.00 0.00 1.39 3.86 0.00 1.48 2.75 0.00 0.01 2.75 2.04 1.26 3 372584 Transcript 0 0.00 8.17 0.31 1.16 1.51 5.73 2.97 2.70 4.94 4.39 0.00 0.00 0.72 0.00 0.00 0.00 0.00 3.17 1.72 4.20 0.54 0.72 0.00 4 491442 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 372583 Transcript 0 0.00 5.92 1.57 0.00 4.07 33.39 5.92 16.39 11.46 1.42 0.00 0.00 5.84 0.00 9.64 0.00 16.83 8.91 0.00 3.00 0.00 5.69 8.11 6 479350 Transcript 0 0.48 0.46 0.18 0.25 1.53 0.88 3.73 0.02 0.51 0.17 2.78 2.53 2.68 0.14 0.74 0.00 5.00 0.62 0.00 0.25 0.50 0.00 0.30 7 247584 Transcript 0 0.00 0.58 0.18 0.00 0.76 2.88 0.76 1.98 1.41 0.33 0.00 0.00 0.00 0.00 1.24 0.00 1.41 1.85 1.37 0.30 0.94 0.60 0.84 8 429157 Transcript 0 0.66 0.07 0.00 1.32 0.09 0.51 0.09 2.09 1.70 0.63 0.60 0.30 0.16 0.00 0.10 0.00 1.25 0.51 0.00 0.37 0.15 0.00 0.10 9 460604 Transcript 0 3.70 0.00 14.37 5.63 3.74 34.13 4.11 13.31 14.61 37.36 31.11 22.66 14.45 5.30 4.45 8.20 18.05 21.10 0.00 6.52 7.85 0.00 0.00 10 ER1a ExonRegion 0 1.81 0.00 0.10 0.00 0.07 1.77 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.31 3.27 0.00 2.97 3.14 0.00 0.02 2.35 1.63 2.52 11 E1a_E2c KnownJunction 0 0.00 0.00 2.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 4.45 0.00 0.00 2.36 0.00 0.00 3.15 2.45 0.00 12 I1_AR3 ActiveIntronRegion 1 4.65 4.84 3.86 3.18 8.48 0.58 3.12 7.56 6.92 3.41 0.00 1.96 20.48 0.00 3.04 0.93 0.52 0.00 0.00 0.50 0.00 0.00 0.46 13 E2_Aa NovelBoundary 0 0.00 0.00 9.85 3.76 0.00 8.40 1.72 4.76 4.86 5.35 0.00 0.00 6.01 0.00 0.00 0.00 0.00 9.24 13.18 20.45 9.08 5.69 0.00 14 ER2a ExonRegion 0 0.00 12.98 0.63 1.08 3.02 8.84 5.94 0.40 3.55 3.71 0.00 0.00 1.44 0.00 0.00 0.00 0.00 4.22 3.43 3.16 1.07 1.44 0.00 15 E2_Ab KnownBoundary 0 0.00 31.24 10.47 5.09 8.06 26.58 19.30 4.07 9.03 8.49 0.00 0.00 5.68 0.00 0.00 0.00 0.00 6.47 9.32 9.01 2.97 2.94 0.00 16 ER2b ExonRegion 0 3.59 16.86 4.59 5.84 14.65 45.88 20.26 15.65 17.56 14.69 0.00 0.00 3.49 0.01 1.26 0.00 1.34 12.31 14.06 15.42 5.68 1.09 2.07 17 E2_Ac KnownBoundary 0 3.11 5.79 3.67 5.96 16.64 26.06 21.95 17.42 20.40 11.50 0.00 0.00 0.00 0.00 6.18 0.00 0.00 2.57 13.74 11.12 8.53 0.00 0.00 18 E2_Ad KnownBoundary 0 3.78 6.05 16.44 4.46 21.56 28.62 16.56 12.08 22.63 12.54 4.69 12.60 0.00 0.00 4.45 0.00 18.33 5.64 4.80 18.34 6.12 5.69 0.00 19 ER2c ExonRegion 1 2.93 5.94 13.05 6.40 16.88 29.62 18.28 16.02 26.70 14.38 2.68 4.50 0.00 1.12 5.91 0.00 11.93 7.18 11.64 12.93 11.44 3.29 0.00 20 ER2d ExonRegion 1 4.41 6.96 9.36 8.08 9.63 27.74 11.82 27.72 27.09 13.55 10.76 11.82 12.08 0.00 5.94 0.84 14.87 24.87 12.37 15.69 16.88 8.16 7.08 21 E2a_E6a KnownJunction 0 0.00 3.35 4.79 5.39 8.57 49.29 7.95 25.47 12.21 2.26 0.00 25.21 0.00 0.00 0.00 4.36 4.77 14.72 0.00 5.94 2.59 3.12 3.59 22 E2a_E8b KnownJunction 0 0.00 5.92 1.57 0.00 4.07 33.39 5.92 16.39 11.46 1.42 0.00 0.00 5.84 0.00 9.64 0.00 16.83 8.91 0.00 3.00 0.00 5.69 8.11 23 E2a_E9b KnownJunction 0 0.00 3.35 0.00 1.23 0.00 2.61 0.00 5.01 6.34 5.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 5.24 0.00 0.00 0.00 24 I2_AR2 ActiveIntronRegion 0 5.20 3.96 10.16 8.90 6.84 5.47 6.22 19.57 15.48 10.13 0.00 0.72 8.68 0.00 4.01 1.12 6.16 7.76 1.21 2.40 3.29 0.00 3.40 25 I2_SR2 SilentIntronRegion 0 3.63 3.56 9.77 7.79 8.87 5.03 10.30 14.27 14.64 9.65 0.70 3.16 6.71 0.16 2.31 0.18 4.12 4.43 3.46 4.56 2.64 0.44 4.11 26 I2_SR3 SilentIntronRegion 0 4.97 5.69 8.84 14.67 11.22 6.55 10.46 15.32 15.11 7.62 0.85 1.49 9.68 0.05 3.38 0.43 7.13 3.98 2.67 3.24 3.01 0.38 2.78 27 I2_AR5 ActiveIntronRegion 1 2.12 1.19 6.43 11.81 10.70 4.89 6.62 3.46 16.06 10.51 0.00 4.33 0.00 0.00 0.00 0.00 13.20 1.85 0.00 9.40 5.14 0.00 2.94 28 I2_AR6 ActiveIntronRegion 1 0.96 2.03 6.02 9.79 15.57 7.34 7.34 5.97 15.61 8.97 0.00 4.33 0.00 1.62 0.00 0.00 15.00 2.18 0.00 9.09 5.41 0.00 2.94 29 I2_AR7 ActiveIntronRegion 1 0.00 4.07 6.21 10.36 17.66 8.80 9.49 7.95 14.04 10.09 0.00 2.16 1.41 1.57 1.74 0.00 19.26 3.08 0.00 7.80 3.97 0.00 5.29 30 I2_SR4 SilentIntronRegion 0 2.06 4.51 5.89 6.43 6.76 3.98 9.81 12.70 14.72 10.20 0.66 1.44 1.67 0.24 1.41 0.83 5.08 3.78 2.66 3.86 2.45 0.00 2.85 31 I2_AR10 ActiveIntronRegion 0 3.40 3.91 10.19 8.03 13.96 8.22 15.09 19.03 17.88 10.95 0.78 3.83 7.36 0.17 1.58 0.31 9.26 4.78 4.50 8.90 3.45 0.00 5.14 32 I2_AR11 ActiveIntronRegion 0 4.23 7.19 10.49 10.19 18.68 2.62 13.42 8.21 9.69 9.86 0.67 2.38 1.10 0.71 6.45 0.00 1.10 4.20 2.12 7.20 2.20 0.00 0.31 33 I2_AR12 ActiveIntronRegion 0 14.66 6.80 13.93 7.64 14.41 6.56 12.51 17.22 13.27 7.94 0.00 0.00 3.50 0.50 7.53 0.00 3.89 12.24 2.01 6.09 3.03 0.00 1.93 34 E3_Aa NovelBoundary 1 0.00 0.00 0.00 1.50 8.66 2.90 19.96 2.51 7.44 6.10 2.16 13.50 26.95 0.00 0.00 0.00 4.11 0.00 0.00 0.00 3.15 0.00 0.00 35 ER3a ExonRegion 0 1.29 1.23 1.11 0.00 3.41 0.04 1.59 0.00 1.12 1.02 0.83 6.39 10.27 0.00 0.00 0.00 6.56 1.65 0.00 0.00 1.34 0.00 1.78 36 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.16 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 37 ER4a ExonRegion 0 1.53 1.53 0.00 0.00 4.01 2.70 1.05 0.00 0.00 0.02 3.33 0.13 3.03 0.00 1.54 0.00 6.84 0.03 0.00 0.00 0.00 0.00 0.00 38 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E5_Aa NovelBoundary 0 3.19 3.03 8.22 3.46 4.24 5.79 4.50 2.14 6.39 7.58 2.00 13.80 20.62 2.47 0.00 0.00 4.02 12.85 0.00 2.49 11.86 5.51 3.33 40 ER5a ExonRegion 0 0.06 0.00 0.00 0.17 1.73 2.56 8.93 0.15 0.38 0.00 5.23 2.99 2.77 0.82 2.90 0.00 7.90 0.08 0.00 1.53 1.65 0.00 0.00 41 E5a_E6a KnownJunction 0 0.00 0.00 0.00 1.33 0.00 0.00 10.82 0.00 1.53 0.00 2.16 5.70 0.00 0.00 0.00 0.00 4.68 1.95 0.00 0.00 0.00 0.00 0.00 42 I5_SR2 SilentIntronRegion 0 9.74 7.37 19.84 12.01 10.15 9.18 8.33 18.19 17.78 15.66 1.90 5.09 7.50 0.72 5.01 0.46 5.79 7.96 1.64 5.40 3.89 0.96 4.12 43 I5_AR2 ActiveIntronRegion 0 26.71 35.02 32.02 16.61 33.32 14.18 15.29 31.23 20.83 17.96 4.67 6.72 15.22 0.80 7.32 0.46 7.30 6.13 2.44 4.25 4.86 1.91 9.15 44 I5_AR3 ActiveIntronRegion 0 3.24 7.86 13.98 11.45 11.64 9.90 6.93 12.04 12.01 8.54 2.65 3.72 3.76 0.81 2.57 0.72 5.05 6.00 1.54 3.09 3.20 1.01 2.37 45 I5_SR4 SilentIntronRegion 0 4.28 3.94 14.32 12.50 13.08 10.98 7.48 14.11 14.74 15.27 2.61 2.62 5.81 0.45 3.01 0.50 8.07 5.73 2.15 5.02 5.02 0.88 5.20 46 E6_Aa NovelBoundary 0 3.78 5.53 10.94 17.11 12.31 2.90 10.51 31.42 17.88 12.73 2.47 0.00 0.00 0.00 4.45 0.00 4.77 2.40 0.00 0.00 5.93 0.00 4.35 47 ER6a ExonRegion 1 8.97 16.90 25.73 21.82 11.12 30.06 14.84 37.22 22.89 20.36 14.80 11.29 23.02 4.96 19.49 2.44 27.94 17.92 5.19 12.22 38.12 11.80 11.10 48 E6_Da NovelBoundary 0 0.00 14.60 10.61 9.29 3.82 16.41 10.42 6.70 7.52 7.23 0.00 0.00 0.00 2.12 0.00 0.00 4.58 2.57 4.80 0.00 3.15 0.00 0.00 49 E6a_E7a KnownJunction 1 16.30 25.13 25.04 9.32 18.59 25.55 20.49 20.41 23.61 22.56 24.11 0.00 26.78 7.42 20.89 0.00 52.17 14.14 0.00 17.77 57.14 22.47 15.19 50 E7_Aa NovelBoundary 0 3.78 22.63 9.85 3.26 7.81 4.66 2.25 6.90 6.45 5.51 0.00 0.00 6.17 0.00 0.00 0.00 3.46 1.91 0.00 6.52 3.15 0.00 0.00 51 ER7a ExonRegion 1 24.68 21.32 45.35 39.32 37.57 45.87 35.09 43.62 48.75 37.68 25.15 21.87 32.35 4.78 22.15 3.35 36.75 18.66 7.54 11.94 42.99 24.03 21.14 52 E7_Da KnownBoundary 1 17.41 5.59 22.50 30.90 39.73 89.55 21.42 33.48 38.02 34.92 38.33 32.41 41.39 4.41 14.09 0.00 35.34 18.20 0.00 8.82 34.22 16.59 12.63 53 ER7b ExonRegion 1 14.83 12.42 33.57 33.60 21.84 31.93 18.94 44.55 36.98 32.18 17.90 15.34 38.30 3.79 21.36 1.20 22.03 14.36 4.51 9.16 25.45 18.23 16.97 54 E7_Db NovelBoundary 1 6.52 3.29 11.12 12.82 24.36 28.11 22.57 25.55 18.17 15.10 0.00 11.85 28.89 0.00 0.00 0.00 0.00 8.12 4.42 13.93 6.12 5.39 11.61 55 ER8a ExonRegion 0 0.00 0.58 0.18 0.00 0.76 2.88 0.76 1.98 1.41 0.33 0.00 0.00 0.00 0.00 1.24 0.00 1.41 1.85 1.37 0.30 0.94 0.60 0.84 56 ER8b ExonRegion 0 0.00 1.75 0.82 0.00 3.18 16.02 2.97 7.20 12.12 2.80 5.70 1.97 2.20 0.86 9.84 0.00 8.52 7.23 0.48 1.83 2.76 1.82 1.49 57 E8a_E9b KnownJunction 0 3.56 0.00 0.00 0.00 4.33 12.61 0.00 4.15 14.15 1.53 12.48 12.00 0.00 0.00 0.00 0.00 12.90 5.02 0.00 3.07 6.30 0.00 0.00 58 ER9a ExonRegion 0 0.66 0.07 0.00 1.32 0.09 0.51 0.09 2.09 1.70 0.63 0.60 0.30 0.16 0.00 0.10 0.00 1.25 0.51 0.00 0.37 0.15 0.00 0.10 59 ER9b ExonRegion 0 0.99 3.40 6.42 3.43 5.20 6.53 5.79 10.20 31.65 21.18 27.17 7.37 6.11 8.83 7.59 8.96 25.77 21.32 8.19 20.48 8.43 4.05 3.40 60 E9a_E10a KnownJunction 0 0.00 0.00 14.55 1.43 0.00 5.79 6.01 11.58 46.79 39.86 29.32 11.55 6.82 7.18 19.53 20.08 25.15 34.24 0.00 31.06 16.12 11.14 18.78 61 I9_SR2 SilentIntronRegion 0 6.13 1.61 8.46 2.68 5.45 3.01 13.76 7.65 17.98 10.54 1.59 0.00 1.52 0.24 4.12 4.14 8.23 12.18 1.21 9.38 2.85 0.00 3.20 62 I9_AR2 ActiveIntronRegion 0 6.76 4.49 15.90 5.32 13.02 7.33 19.36 10.82 19.54 13.98 0.95 1.65 3.10 0.98 0.90 9.35 7.83 10.41 1.66 5.86 3.13 0.46 2.25 63 I9_AR3 ActiveIntronRegion 0 26.16 7.54 18.51 10.52 16.36 6.14 17.36 12.07 19.47 15.78 1.47 2.63 1.53 0.48 5.36 6.01 7.85 10.16 0.00 4.45 2.77 1.14 2.38 64 I9_AR4 ActiveIntronRegion 0 12.70 7.21 33.64 11.40 4.38 5.50 9.99 25.46 42.22 24.40 1.93 0.00 9.38 0.00 0.26 2.70 0.00 7.39 0.00 5.22 2.20 2.08 2.14 65 E10_Aa NovelBoundary 0 3.11 0.00 3.67 0.00 0.00 8.69 1.77 1.81 6.28 0.00 0.00 0.00 0.00 0.00 4.45 0.00 4.11 2.07 0.00 21.67 0.00 0.00 0.00 66 ER10a ExonRegion 0 9.37 2.52 26.46 5.26 7.54 26.28 22.79 28.92 67.74 56.01 75.74 24.18 45.96 30.89 24.25 42.67 70.37 69.87 8.64 44.02 24.39 9.28 14.02 67 E10_Ab KnownBoundary 1 29.63 3.35 45.74 8.92 18.93 42.42 33.56 25.38 70.34 59.07 87.65 0.00 19.80 31.79 14.46 46.83 50.96 50.66 0.00 34.26 23.29 7.78 11.69 68 ER10b ExonRegion 0 12.74 3.24 39.29 5.73 10.79 37.46 31.38 21.78 69.42 59.43 62.71 18.25 27.97 30.08 23.32 45.40 54.52 57.48 8.34 36.16 24.05 13.37 9.31 69 E10a_E11a KnownJunction 0 9.26 3.16 29.12 3.00 4.16 14.42 17.14 21.03 48.41 57.86 50.64 18.61 38.31 36.20 27.20 42.72 24.87 60.85 11.95 19.11 14.39 10.90 8.19 70 ER11a ExonRegion 0 8.02 0.32 27.95 5.96 13.65 44.93 31.46 23.49 43.18 52.22 56.04 19.25 25.70 24.43 25.44 48.73 45.94 53.74 3.10 34.87 16.11 9.82 16.45 71 E11_Da NovelBoundary 0 0.00 0.00 0.00 1.63 0.00 0.00 6.23 0.00 3.04 4.08 0.00 0.00 0.00 2.47 0.00 4.36 16.83 6.43 0.00 6.52 2.66 0.00 0.00 72 E11a_E12a KnownJunction 0 7.11 2.63 20.11 0.00 15.62 13.00 12.85 16.10 43.78 20.66 50.33 0.00 14.61 23.54 19.66 33.07 34.60 17.12 4.80 27.48 3.15 8.45 29.54 73 E11a_E13a KnownJunction 0 3.70 0.00 14.37 5.63 3.74 34.13 4.11 13.31 14.61 37.36 31.11 22.66 14.45 5.30 4.45 8.20 18.05 21.10 0.00 6.52 7.85 0.00 0.00 74 E12_Aa NovelBoundary 0 6.96 0.00 4.73 0.00 0.00 0.00 1.85 21.15 3.53 2.63 2.58 0.00 6.82 0.00 0.00 0.00 4.11 10.45 0.00 3.13 0.00 0.00 8.54 75 ER12a ExonRegion 0 11.09 2.39 28.15 5.58 11.30 26.15 22.32 33.72 55.91 32.33 50.68 5.36 20.04 21.43 20.00 33.99 50.26 46.13 1.83 37.27 8.98 9.65 14.45 76 E12_Da NovelBoundary 0 0.00 0.00 8.63 0.00 4.33 2.33 2.25 4.19 10.10 2.90 7.74 0.00 0.00 0.00 0.00 4.36 4.49 4.10 0.00 12.21 11.98 8.39 4.01 77 E12a_E13a KnownJunction 0 28.67 0.00 27.14 6.73 7.89 49.35 23.32 39.02 57.61 33.82 26.01 6.30 18.83 36.20 14.09 42.13 87.05 55.13 4.80 25.38 13.65 7.41 20.49 78 I12_AR2 ActiveIntronRegion 0 0.00 0.00 11.03 0.00 0.00 1.83 1.32 10.37 14.82 6.31 0.00 0.00 0.00 5.96 3.87 5.45 3.85 12.93 3.19 11.70 0.00 0.00 5.87 79 I12_SR1 SilentIntronRegion 0 2.35 0.71 5.15 1.27 1.87 5.18 4.52 5.69 14.15 7.71 3.55 0.14 1.47 0.83 1.26 1.86 2.84 7.15 0.99 7.03 3.17 1.28 2.11 80 I12_AR3 ActiveIntronRegion 0 4.63 1.23 12.59 4.32 6.50 9.51 6.65 10.79 13.86 8.88 5.34 0.90 1.98 1.38 1.39 2.83 4.10 10.63 1.23 7.62 3.05 2.33 1.62 81 E13_Aa NovelBoundary 0 0.00 0.00 14.22 1.80 10.70 24.02 15.28 12.16 24.77 16.17 4.95 0.00 6.33 0.00 0.00 0.00 4.58 11.98 0.00 0.00 3.09 5.63 7.94 82 ER13a ExonRegion 0 15.03 8.46 60.31 19.89 19.28 56.34 28.70 61.15 104.39 90.25 89.60 28.81 37.63 39.80 35.78 74.61 83.24 97.91 7.40 40.45 27.69 11.57 21.67 83 E13a_E14a KnownJunction 1 20.60 14.34 61.44 30.77 15.96 29.59 26.28 80.09 126.56 116.85 130.66 22.06 24.51 52.74 66.51 91.77 87.98 113.71 13.65 55.16 36.88 24.37 34.15 84 ER14a ExonRegion 0 6.90 2.33 47.94 12.28 11.50 39.74 17.14 39.51 89.40 74.97 75.66 12.24 22.13 27.68 34.34 47.92 67.76 75.89 7.92 35.89 24.98 12.60 16.32 85 E14a_E15a KnownJunction 0 3.78 0.00 43.49 6.26 12.82 22.26 9.94 30.89 53.47 58.75 41.43 0.00 12.66 16.19 30.53 41.27 49.56 70.93 0.00 24.16 16.74 0.00 3.84 86 E14a_E15b KnownJunction 0 7.56 2.89 10.67 0.00 0.00 10.33 2.25 6.04 23.15 11.63 9.90 13.50 0.00 5.47 9.15 4.27 4.58 20.89 0.00 9.14 2.72 2.33 16.30 87 ER15a ExonRegion 0 3.17 0.51 44.42 6.47 9.37 15.13 7.28 28.09 67.62 63.08 37.21 7.58 19.93 24.77 37.72 30.46 39.61 77.14 0.00 21.28 17.63 3.65 6.61 88 ER15b ExonRegion 0 6.99 3.63 49.83 10.23 9.77 29.84 15.73 38.94 70.47 64.32 60.00 7.70 17.48 18.19 26.88 31.56 44.68 49.37 6.37 29.71 22.27 10.32 10.67 89 E15_Da KnownBoundary 1 28.67 18.62 53.46 22.71 36.67 123.51 75.92 48.88 70.11 60.63 20.06 0.00 40.42 15.01 44.26 61.52 47.59 20.15 4.71 46.92 14.83 14.82 12.21 90 ER15c ExonRegion 0 10.72 13.06 44.77 10.92 16.02 47.68 33.49 51.27 100.38 83.88 21.12 2.47 11.63 9.05 14.99 16.20 36.23 44.00 7.94 26.84 12.53 14.28 6.78 91 E15_Db KnownBoundary 0 53.12 21.90 80.28 18.35 35.99 33.90 32.02 78.90 168.29 130.39 32.11 0.00 13.47 11.42 18.54 24.61 37.40 82.08 18.17 51.45 13.84 23.09 19.89 92 ER15d ExonRegion 0 21.21 15.47 64.58 17.58 38.44 69.66 36.11 55.89 81.71 60.93 22.98 2.41 5.90 5.50 9.38 13.93 21.63 42.17 4.71 30.21 12.61 9.34 9.43