Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM59 Gene 0 294.01 155.65 239.83 194.72 303.08 324.01 195.01 246.62 228.03 343.12 158.50 215.00 189.82 156.10 314.97 157.20 140.32 150.77 118.76 102.33 250.92 540.96 259.61 2 371341 Transcript 0 46.56 31.81 12.08 20.89 48.30 42.37 51.92 28.21 18.52 38.13 16.84 0.00 0.00 8.31 30.46 8.76 8.46 50.60 37.60 23.31 3.13 14.27 28.49 3 440019 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.18 0.00 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 4.35 4 234831 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 420738 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 452421 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 371338 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 371337 Transcript 1 7.33 4.53 3.13 9.05 17.72 15.39 23.02 8.99 14.15 10.07 6.51 13.01 28.98 8.86 6.69 16.13 12.43 3.06 7.79 5.07 2.34 7.25 9.55 9 371348 Transcript 0 27.99 6.12 10.94 9.19 23.27 20.71 21.10 18.28 15.85 22.66 11.06 16.37 18.65 12.60 15.94 21.24 10.54 13.47 13.33 7.97 9.67 16.25 15.55 10 371344 Transcript 0 12.51 6.08 9.81 5.88 17.45 10.82 15.82 7.92 5.84 9.28 5.97 15.52 16.37 9.29 15.09 12.57 13.30 3.34 7.05 5.52 4.02 8.05 8.44 11 470395 Transcript 1 19.37 10.53 10.78 15.12 25.25 25.89 17.99 21.60 18.35 26.58 12.23 43.60 26.32 16.24 27.89 10.11 4.78 3.98 11.69 5.68 10.09 34.29 13.82 12 ER1a ExonRegion 0 0.00 2.64 0.00 0.89 0.25 2.75 2.44 0.49 0.35 1.15 1.93 0.00 0.00 0.48 0.73 1.72 0.00 0.64 0.00 0.86 1.07 0.00 0.14 13 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 3.36 0.00 0.00 2.50 5.37 0.00 0.00 0.00 0.00 3.85 0.00 1.62 0.00 0.00 0.00 0.00 0.00 14 E1_Ac KnownBoundary 0 0.00 3.35 0.00 2.03 0.00 14.03 3.97 0.00 0.00 0.00 0.00 0.00 0.00 4.89 0.00 0.00 0.00 0.00 0.00 3.13 3.15 0.00 0.00 15 E1_Ad KnownBoundary 0 11.34 12.96 1.63 2.06 16.89 37.42 8.83 2.51 1.77 0.00 0.00 0.00 0.00 6.71 5.19 0.00 8.70 6.63 9.60 12.59 0.00 3.06 8.79 16 ER1b ExonRegion 0 1.41 8.13 0.00 5.00 5.35 18.34 9.27 1.73 2.47 2.68 3.87 0.00 0.00 6.50 2.90 2.97 3.30 5.54 0.00 4.26 4.41 0.00 2.94 17 ER1c ExonRegion 0 19.62 37.46 3.96 14.10 41.68 50.71 25.66 1.93 3.94 9.26 4.91 0.00 0.00 20.74 9.26 10.52 3.55 32.26 15.80 17.84 16.44 16.43 37.61 18 E1_Ae KnownBoundary 0 23.56 48.28 6.98 19.15 58.49 29.70 35.82 4.68 4.48 18.96 7.21 0.00 0.00 4.41 10.51 20.25 3.65 47.96 17.98 17.83 23.60 28.60 57.79 19 ER1d ExonRegion 0 90.41 92.96 18.03 28.43 95.56 119.20 88.71 16.54 18.70 35.23 16.84 0.00 0.00 35.73 30.26 31.84 14.62 106.38 86.00 46.81 59.81 83.04 143.90 20 ER1e ExonRegion 1 243.96 148.58 44.69 64.33 239.56 291.91 240.34 49.70 66.22 114.15 75.58 0.62 0.38 72.36 156.85 73.09 69.45 235.42 256.52 119.76 169.01 218.68 395.37 21 E1_Da KnownBoundary 0 86.76 19.01 43.91 54.01 80.65 175.24 114.29 37.54 77.43 111.07 42.17 0.00 0.00 22.66 79.36 19.40 55.73 296.23 107.20 49.66 113.79 132.63 241.24 22 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E1a_E3b KnownJunction 0 93.13 60.98 24.16 40.89 96.35 82.00 101.40 55.94 36.69 75.11 31.74 0.00 0.00 16.13 60.20 15.81 16.92 100.57 75.20 45.76 5.19 28.53 56.85 24 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.18 0.00 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 4.35 25 ER1f ExonRegion 1 57.00 23.21 39.79 33.10 32.92 136.19 51.05 35.76 61.22 95.26 63.40 0.95 1.48 55.44 75.62 43.20 46.89 123.68 62.39 50.57 183.78 104.22 133.95 26 E1_Af KnownBoundary 1 215.59 66.96 60.94 50.28 102.63 464.05 151.92 64.73 82.55 117.09 136.67 0.00 0.00 91.82 150.44 150.99 82.47 199.43 141.65 123.81 395.56 245.85 408.21 27 E1_Ag KnownBoundary 1 319.24 128.73 92.01 71.55 175.38 377.34 221.03 109.01 132.35 176.03 164.30 19.06 5.84 158.75 510.42 223.36 188.41 415.40 215.44 93.83 374.31 242.12 370.05 28 ER1g ExonRegion 1 519.49 195.68 150.99 121.15 293.44 896.52 381.60 149.61 192.82 289.91 378.85 18.76 11.46 333.31 767.86 384.06 358.70 548.58 304.03 218.20 975.75 574.82 742.64 29 ER1h ExonRegion 1 444.09 172.68 312.08 167.90 292.91 676.07 269.30 297.67 321.86 527.71 440.09 41.81 47.02 344.31 646.39 364.41 516.95 504.89 198.84 217.33 1354.44 645.88 661.23 30 E1b_E2a KnownJunction 0 0.00 0.00 0.00 1.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.71 4.45 0.00 0.00 0.00 0.00 0.00 0.00 3.12 3.67 31 E1b_E3b KnownJunction 1 242.71 105.84 632.62 399.45 151.87 252.92 120.74 576.47 620.05 902.16 469.07 63.62 101.62 1047.15 1691.46 853.88 391.40 904.97 568.30 436.04 1084.32 1772.46 1325.09 32 E1b_E5b NovelJunction 0 3.78 0.00 16.14 3.33 0.00 0.00 0.00 2.34 4.75 3.25 4.84 0.00 0.00 19.31 23.36 19.91 0.00 8.46 23.53 0.00 21.50 44.46 90.23 33 I1_AR3 ActiveIntronRegion 0 32.80 33.14 18.05 21.25 40.23 16.49 29.39 18.41 13.88 20.20 5.75 30.27 27.04 14.02 13.00 7.42 6.18 5.97 10.58 8.43 2.76 13.81 5.32 34 I1_SR3 SilentIntronRegion 0 31.98 13.31 23.92 25.00 50.09 41.75 41.32 29.93 26.95 46.39 16.32 39.46 27.96 17.26 16.83 20.27 16.41 8.25 11.25 15.70 4.62 17.93 12.67 35 ER2a ExonRegion 0 1.60 0.12 0.07 1.40 0.49 0.78 1.77 0.00 0.07 0.42 0.29 0.00 4.69 10.19 0.97 0.63 0.90 0.06 1.16 0.52 2.20 11.87 6.59 36 E2a_E3b KnownJunction 0 3.70 0.00 0.00 0.00 0.00 0.00 4.42 0.00 0.00 0.00 0.00 0.00 6.01 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.15 4.35 37 E3_Aa NovelBoundary 1 46.90 38.41 31.31 22.54 49.66 69.05 75.52 38.49 32.49 51.39 23.32 36.61 33.76 23.66 27.81 18.63 61.52 20.89 34.07 15.66 25.08 27.74 11.10 38 ER3a ExonRegion 0 52.81 12.24 19.43 18.38 42.52 34.99 42.19 35.69 29.85 41.89 20.18 28.40 37.31 25.20 27.53 42.48 21.08 26.94 26.65 14.88 19.35 28.34 26.69 39 E3_Ab KnownBoundary 0 40.82 14.60 30.54 29.30 57.56 60.48 57.81 25.42 30.47 24.98 20.74 18.91 27.27 26.96 20.40 24.61 17.11 14.63 19.20 8.82 18.35 19.35 21.94 40 ER3b ExonRegion 0 298.91 254.35 701.24 570.14 545.47 846.85 329.35 635.41 661.56 934.16 396.13 298.61 278.59 562.25 1339.30 816.54 382.21 844.32 362.68 395.44 766.76 1691.64 1168.25 41 E3a_E4a KnownJunction 0 406.07 436.57 672.09 617.30 1443.55 2381.98 1031.55 631.64 698.86 995.05 641.27 453.60 537.63 596.27 1049.02 496.54 459.28 627.19 421.28 414.89 1072.39 1689.31 787.65 42 ER4a ExonRegion 0 568.41 495.08 822.02 673.38 957.16 2063.70 824.21 715.00 774.00 1151.19 670.94 504.63 414.20 619.29 1191.35 588.04 581.62 801.07 448.26 428.22 1223.31 1680.87 948.38 43 E4_Da KnownBoundary 0 17.86 0.00 8.37 6.86 51.70 14.03 45.18 7.68 18.11 11.09 12.06 25.21 27.43 13.77 4.45 28.03 12.90 8.12 17.51 15.34 2.84 11.51 11.69 44 E4a_E5b KnownJunction 0 1501.23 638.57 1051.71 887.00 782.43 875.58 404.71 833.64 805.95 1219.29 595.41 532.37 446.56 767.74 1704.44 799.79 638.90 886.40 511.64 493.76 1150.97 2221.74 1225.73 45 ER4b ExonRegion 0 7.33 4.53 3.13 9.05 17.72 15.39 23.02 8.99 14.15 10.07 6.51 13.01 28.98 8.86 6.69 16.13 12.43 3.06 7.79 5.07 2.34 7.25 9.55 46 ER5a ExonRegion 0 12.51 6.08 9.81 5.88 17.45 10.82 15.82 7.92 5.84 9.28 5.97 15.52 16.37 9.29 15.09 12.57 13.30 3.34 7.05 5.52 4.02 8.05 8.44 47 E5_Ab KnownBoundary 0 28.08 5.66 13.45 0.00 11.54 21.69 28.00 11.21 12.30 15.20 10.32 12.60 25.49 12.07 14.71 11.02 13.18 4.27 4.71 0.00 0.00 0.00 0.00 48 ER5b ExonRegion 0 968.26 432.75 791.54 694.46 769.68 892.65 513.71 845.59 802.18 1260.41 696.62 714.36 623.74 716.08 1147.88 747.72 617.96 702.14 539.92 354.10 1173.75 2011.71 1172.61 49 E5a_E6a KnownJunction 0 2137.34 812.49 936.96 793.04 1470.80 1842.40 999.14 934.23 840.36 1321.80 786.04 1083.50 854.33 677.91 1538.54 735.02 643.57 626.15 541.47 394.56 1071.59 2050.89 1162.90 50 ER6a ExonRegion 0 1229.52 621.73 721.24 646.12 1269.09 1370.97 750.35 948.42 818.88 1267.90 653.98 971.44 784.84 664.28 1075.55 729.44 510.11 648.38 507.02 313.62 773.77 1927.61 1119.40 51 E6a_E7a KnownJunction 0 1387.51 780.45 780.81 799.60 1620.71 2065.63 1117.32 1178.33 1013.73 1547.97 826.84 1039.84 850.43 657.19 1137.16 1439.54 666.39 880.10 971.42 398.33 811.94 2644.67 2043.59 52 ER7a ExonRegion 0 764.89 437.39 747.00 699.68 1178.50 1255.08 756.51 970.84 872.73 1329.67 700.61 939.28 892.02 688.55 1116.59 667.13 542.43 477.15 537.28 303.89 799.89 2060.93 1084.77 53 E7a_E8b KnownJunction 0 668.04 409.53 870.11 861.66 1037.69 1257.97 764.54 1053.02 903.87 1340.01 637.06 969.02 788.58 722.71 1430.13 565.24 408.88 331.01 557.38 329.37 747.81 2628.57 957.52 54 ER8a ExonRegion 1 19.37 10.53 10.78 15.12 25.25 25.89 17.99 21.60 18.35 26.58 12.23 43.60 26.32 16.24 27.89 10.11 4.78 3.98 11.69 5.68 10.09 34.29 13.82 55 E8_Ab KnownBoundary 0 26.00 11.91 8.81 10.16 8.32 7.95 13.91 15.94 12.18 21.52 11.69 24.46 14.61 6.71 11.37 0.00 0.00 0.00 8.09 3.32 0.00 9.37 4.35 56 ER8b ExonRegion 0 733.31 460.23 820.48 708.54 1081.50 1097.83 675.23 900.40 804.48 1169.35 634.47 945.91 686.57 608.02 1206.22 472.57 449.17 336.89 407.23 319.72 721.61 1964.68 860.95 57 E8a_E9a KnownJunction 0 849.34 488.86 888.73 714.73 1261.21 1250.13 884.98 892.83 772.45 1145.45 565.20 899.84 621.06 488.44 993.64 362.90 343.34 276.00 327.73 334.29 644.09 1558.76 654.39 58 ER8c ExonRegion 0 1.85 1.78 1.23 3.58 0.00 1.83 7.12 1.73 1.24 0.86 0.00 12.45 0.00 0.00 0.36 5.20 0.00 0.00 3.19 0.00 0.00 0.26 1.10 59 ER8d ExonRegion 0 0.00 0.00 0.00 0.91 0.00 1.22 2.21 0.58 0.82 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 1.06 0.00 0.00 0.00 0.00 60 ER9a ExonRegion 0 1252.98 647.54 816.53 646.66 1091.98 876.79 654.59 829.19 717.88 1059.07 368.36 832.74 772.91 331.59 869.56 250.62 249.04 148.91 211.58 247.67 313.33 1850.84 485.86 61 E9_Da KnownBoundary 1 305.31 138.40 382.98 308.22 985.82 381.43 464.99 320.75 269.88 386.36 29.01 185.76 119.15 52.92 148.09 56.31 25.90 36.89 58.64 70.37 24.15 852.19 91.68 62 E9_Db KnownBoundary 0 102.98 80.25 272.55 214.09 660.53 268.31 199.79 285.51 220.05 313.72 35.43 127.09 86.68 23.90 86.53 54.00 21.13 32.71 29.74 89.80 13.84 560.04 76.66 63 ER9b ExonRegion 1 465.63 315.20 851.02 654.87 1893.09 841.71 687.80 785.58 662.64 962.83 109.21 712.20 518.25 155.92 557.04 136.72 54.46 123.80 122.64 193.62 45.18 1731.40 273.11 64 ER9c ExonRegion 1 335.03 280.20 702.21 578.75 1335.04 746.14 516.37 719.95 611.58 942.62 98.35 689.15 626.72 125.85 475.18 107.58 65.89 117.93 105.80 189.78 65.64 1398.78 257.68 65 E9_Dc KnownBoundary 1 495.57 387.04 615.83 512.52 983.02 646.56 584.63 635.46 533.53 932.27 94.60 746.49 624.63 150.92 610.18 104.59 47.78 98.04 143.16 197.70 79.45 1618.71 267.61 66 ER9d ExonRegion 1 697.41 358.96 503.52 382.55 538.76 281.94 259.40 435.77 379.94 567.07 107.98 400.52 324.44 98.52 351.70 72.94 121.86 69.68 141.02 157.73 142.44 925.64 182.20 67 ER9e ExonRegion 0 3.17 0.00 2.45 0.00 4.01 6.42 0.00 0.86 1.85 3.44 1.93 4.33 0.00 0.00 4.35 0.00 0.00 0.00 0.00 1.06 0.00 4.17 4.40 68 IG47_AR7 ActiveIntergenicRegion 0 15.10 15.39 5.00 6.11 19.60 24.73 32.56 8.22 21.50 9.67 3.55 17.67 15.72 0.13 8.15 6.43 0.00 14.88 3.19 27.37 1.73 32.66 13.10 69 IG47_SR5 SilentIntergenicRegion 0 14.41 26.70 14.99 16.73 23.85 42.53 23.66 21.07 73.50 38.14 6.99 25.52 16.96 5.29 10.93 7.84 0.00 21.47 4.34 42.19 3.42 44.64 25.56 70 IG47_AR6 ActiveIntergenicRegion 0 20.46 37.62 15.93 20.90 18.73 45.23 8.39 29.38 100.87 56.01 5.80 19.48 0.00 0.00 5.80 0.00 0.00 16.63 9.56 38.65 1.84 39.93 20.56 71 IG47_SR4 SilentIntergenicRegion 0 18.89 45.90 14.03 34.11 49.35 36.76 31.47 38.37 87.08 52.74 2.40 24.59 21.92 4.55 8.61 6.47 1.54 31.99 27.07 40.44 8.88 33.88 25.98 72 IG47_AR5 ActiveIntergenicRegion 0 18.20 36.00 26.62 37.21 45.50 46.38 36.03 26.58 89.01 47.57 1.58 16.58 9.46 4.59 9.25 8.64 2.71 42.28 21.66 45.09 12.93 31.70 23.97 73 IG47_AR4 ActiveIntergenicRegion 0 10.81 19.85 30.47 24.32 63.16 61.63 28.47 28.02 77.03 44.13 0.00 14.13 6.66 7.78 8.86 12.98 0.00 34.13 41.66 43.84 11.66 27.63 17.77 74 IG47_SR3 SilentIntergenicRegion 0 10.90 17.77 25.28 11.66 48.36 39.32 16.43 13.19 34.35 17.50 0.00 8.50 5.21 2.53 1.18 5.28 0.00 7.73 15.45 20.25 4.73 7.64 8.70 75 IG47_AR3 ActiveIntergenicRegion 0 16.91 30.63 26.02 37.17 55.17 56.17 42.85 64.79 106.11 69.17 3.16 12.83 9.84 4.76 7.72 6.53 6.54 40.49 41.73 48.55 15.13 43.73 34.80 76 IG47_AR2 ActiveIntergenicRegion 0 21.17 44.74 33.26 36.60 66.51 91.17 33.48 71.85 145.04 73.57 7.18 8.66 0.00 8.12 11.61 2.97 6.60 75.23 53.70 52.89 28.65 52.39 55.80 77 IG47_SR2 SilentIntergenicRegion 0 16.92 62.41 23.43 24.70 57.87 46.73 30.33 47.79 100.68 60.04 5.52 9.26 15.48 5.42 5.97 12.01 3.78 43.39 48.65 57.58 24.58 42.02 48.68 78 IG47_AR1 ActiveIntergenicRegion 0 23.97 68.99 43.36 38.82 45.25 46.24 30.08 65.60 87.22 63.57 1.86 4.19 2.67 3.53 4.15 4.51 2.67 51.70 29.81 34.88 16.29 33.03 28.41