Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SCP2 Gene 0 110.58 47.78 72.63 42.95 96.99 91.24 60.95 68.51 68.17 53.95 109.46 131.94 72.52 95.64 84.31 64.42 65.44 18.12 24.08 19.33 89.74 125.16 58.04 2 371513 Transcript 0 2.85 6.19 16.44 12.27 8.35 27.43 7.85 21.46 22.39 10.10 2.76 15.01 6.47 3.30 0.36 1.28 4.58 2.65 0.78 8.36 1.43 8.90 0.72 3 408941 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 407246 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 371514 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 473584 Transcript 0 0.00 1.31 0.00 0.00 1.71 1.75 0.84 0.83 0.06 0.00 0.00 0.00 1.23 0.00 0.65 0.00 0.00 0.00 0.00 0.68 0.70 0.00 0.00 7 478631 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 435345 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 430330 Transcript 0 6.52 2.96 1.24 0.00 3.14 0.00 0.00 0.00 0.00 2.93 2.53 0.00 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 371509 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 478274 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 484100 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 488965 Transcript 0 20.60 4.57 8.50 9.56 19.82 14.64 10.97 11.32 11.81 7.88 11.33 17.23 11.22 6.53 4.58 9.52 8.40 3.49 2.19 2.91 11.82 14.25 9.65 14 ER1a ExonRegion 0 17.37 12.66 7.64 5.57 6.76 37.29 9.04 9.57 13.07 8.60 5.86 0.00 0.00 13.03 3.27 9.53 5.00 2.51 3.22 9.77 45.84 22.01 27.80 15 E1_Ab KnownBoundary 0 11.11 6.45 18.36 5.99 0.00 18.68 2.25 10.06 11.95 7.71 0.00 0.00 0.00 0.00 0.00 4.10 0.00 6.09 0.00 9.78 11.00 0.00 7.17 16 ER1b ExonRegion 0 4.95 4.00 13.51 4.64 0.06 11.64 2.23 4.14 8.24 9.61 9.01 0.78 3.16 6.48 0.72 1.47 7.97 4.15 0.00 3.35 47.74 5.52 7.36 17 E1a_E2a KnownJunction 1 5.85 12.76 17.98 4.89 0.00 5.51 2.25 8.38 30.50 16.44 17.69 6.00 6.82 14.77 4.45 3.59 45.63 2.53 0.00 13.68 127.82 17.02 32.86 18 ER2a ExonRegion 1 6.09 5.61 28.52 11.98 9.32 5.12 7.78 17.05 33.22 17.84 16.76 33.59 1.94 41.33 10.05 7.38 25.67 27.24 5.38 24.91 96.58 65.56 64.91 19 E2a_E3a KnownJunction 0 6.22 5.20 39.68 20.34 18.08 7.44 7.60 21.44 36.95 20.09 16.58 33.01 6.49 28.43 14.71 7.86 0.00 53.52 0.00 34.07 67.83 80.52 91.51 20 ER3a ExonRegion 1 13.58 9.29 40.68 11.49 17.54 40.85 15.19 20.81 34.51 19.55 21.37 28.14 11.40 31.04 6.61 20.02 12.24 35.57 0.18 21.04 91.24 42.25 51.76 21 E3a_E4a KnownJunction 0 18.60 19.01 37.23 19.38 42.19 83.70 41.16 20.95 34.92 15.61 24.43 24.76 6.82 38.79 5.56 15.38 34.13 27.57 0.00 16.94 94.46 46.72 43.88 22 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.69 0.00 0.00 6.66 2.41 0.00 0.00 0.00 0.00 0.00 0.00 2.78 3.12 0.00 23 ER4a ExonRegion 1 30.74 21.48 44.32 16.69 20.23 53.07 20.34 30.06 45.57 23.29 35.36 48.51 14.28 50.52 4.29 14.16 18.35 31.38 3.69 22.68 122.69 63.78 53.17 24 E4a_E5a KnownJunction 1 41.56 14.60 43.05 17.61 7.47 32.37 5.83 36.51 39.26 19.64 44.80 74.12 19.97 52.56 4.45 8.72 7.20 15.34 0.00 5.88 171.00 37.60 54.38 25 ER5a ExonRegion 1 30.77 31.25 37.40 18.58 31.74 42.77 17.46 35.21 47.94 23.33 48.11 47.29 9.16 51.85 9.11 17.97 26.15 14.01 0.00 17.22 112.86 75.46 45.54 26 E5a_E6a KnownJunction 0 47.79 28.81 33.50 25.74 57.81 67.86 21.29 39.47 57.87 28.10 48.54 25.96 19.64 53.09 4.45 15.12 17.86 20.52 0.00 26.85 81.42 118.18 69.66 27 ER6a ExonRegion 1 42.23 42.35 33.22 26.83 41.80 51.84 26.07 38.09 61.07 28.84 49.87 93.95 35.93 57.94 3.11 11.16 16.79 25.69 3.84 20.14 88.83 98.27 50.73 28 E6a_E8a KnownJunction 1 32.52 74.13 39.41 37.72 44.65 53.04 40.41 48.71 59.75 34.33 34.22 101.88 76.29 49.39 4.45 3.50 20.29 15.79 0.00 26.97 39.72 123.69 40.80 29 ER7a ExonRegion 0 0.00 2.62 0.00 0.00 3.41 3.51 1.69 1.66 0.12 0.00 0.00 0.00 2.46 0.00 1.31 0.00 0.00 0.00 0.00 1.36 1.40 0.00 0.00 30 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER8a ExonRegion 1 26.26 47.85 40.34 41.42 56.53 102.15 53.48 55.28 79.28 36.49 39.02 153.15 61.04 52.83 6.80 14.21 24.96 15.13 0.00 24.97 56.09 133.05 53.23 32 E8a_E9a KnownJunction 1 38.15 61.50 35.24 44.98 63.33 104.66 42.75 43.33 89.78 37.58 26.69 148.85 72.72 49.97 13.35 14.70 17.11 7.59 0.00 28.19 50.72 135.88 57.96 33 ER9a ExonRegion 1 44.08 48.08 32.11 37.47 69.45 110.79 42.09 36.26 69.75 30.72 23.68 151.53 70.84 67.73 9.27 22.89 15.56 19.54 0.00 23.77 78.65 133.99 36.76 34 E9a_E10a KnownJunction 1 58.38 44.14 45.47 28.67 84.04 141.57 59.88 39.51 55.58 41.02 21.37 136.99 108.27 80.52 13.72 22.90 13.18 25.83 0.00 25.50 133.32 113.65 32.52 35 ER10a ExonRegion 1 57.75 51.62 44.83 31.62 48.80 100.22 42.83 42.02 69.62 32.15 42.61 145.83 51.71 63.50 10.97 25.21 22.25 25.87 0.40 24.48 121.90 98.84 39.36 36 E10a_E11a KnownJunction 1 41.64 68.80 45.15 39.66 72.75 110.73 78.21 37.17 59.32 38.36 42.43 150.35 48.86 75.76 13.85 27.34 48.71 29.39 7.53 29.79 113.73 119.59 64.02 37 ER11a ExonRegion 1 46.45 35.86 56.57 38.45 74.83 121.90 49.38 35.53 64.02 30.11 46.42 127.22 47.00 68.66 8.59 34.84 20.85 35.66 4.95 28.94 96.99 85.18 58.28 38 E11a_E12a KnownJunction 1 48.60 41.83 50.74 40.05 65.53 105.00 67.70 40.62 66.52 24.23 34.17 98.73 52.92 59.10 0.00 22.90 9.54 10.24 3.48 14.51 135.97 84.26 74.86 39 E12_Ab NovelBoundary 0 45.34 28.55 15.94 29.47 44.82 74.84 35.60 24.60 33.97 12.60 26.59 49.67 19.32 42.09 4.45 21.79 4.30 7.25 0.00 21.48 62.83 47.64 24.50 40 ER12a ExonRegion 1 50.09 39.45 48.69 40.98 58.33 108.32 55.34 40.79 64.06 28.90 35.69 98.13 41.27 60.42 4.26 26.75 10.78 18.35 1.70 20.71 120.91 74.87 56.38 41 ER12b ExonRegion 1 38.55 37.70 45.24 42.77 41.00 115.58 41.36 48.63 67.76 31.12 40.80 121.93 23.32 62.81 7.53 30.28 18.56 26.42 7.49 34.62 95.65 81.26 48.97 42 E12_Da KnownBoundary 1 23.71 32.49 43.02 39.32 41.51 101.25 26.50 40.91 59.78 30.73 38.06 127.54 18.34 55.27 14.83 35.63 30.01 30.43 13.65 37.90 80.19 91.05 74.27 43 ER12c ExonRegion 1 42.94 34.06 72.52 44.59 39.52 108.91 31.33 43.55 68.24 30.25 35.31 73.14 18.84 57.28 11.66 37.63 16.39 28.15 10.75 33.32 114.59 95.95 71.37 44 E12b_E13a KnownJunction 0 3.48 15.59 5.17 17.88 16.72 95.17 4.20 11.13 24.97 5.99 0.00 0.00 0.00 2.47 6.30 8.72 0.00 2.40 0.00 5.50 8.53 3.00 3.16 45 E12b_E14a KnownJunction 1 66.01 14.67 95.80 33.06 16.38 42.59 31.49 26.45 48.70 25.71 41.06 75.17 27.11 62.51 4.45 23.67 8.51 19.81 8.47 12.08 117.93 81.07 62.23 46 E13_Aa NovelBoundary 1 165.88 249.63 77.20 58.70 53.57 72.97 118.27 156.66 71.93 92.83 590.04 421.04 202.75 234.21 181.10 89.29 303.69 8.54 0.00 39.37 114.84 44.46 35.43 47 ER13a ExonRegion 0 4.20 13.18 5.87 11.19 8.52 56.64 8.67 15.91 19.50 11.09 2.37 4.44 7.45 2.89 0.60 2.29 2.02 4.04 0.29 5.40 1.86 4.17 2.45 48 E13_Da KnownBoundary 0 0.00 17.43 23.57 12.65 15.96 49.40 9.76 27.31 38.19 13.08 4.53 12.60 13.31 6.89 0.00 4.36 8.32 5.89 0.00 11.06 2.90 8.76 0.00 49 ER13b ExonRegion 0 2.85 6.19 16.44 12.27 8.35 27.43 7.85 21.46 22.39 10.10 2.76 15.01 6.47 3.30 0.36 1.28 4.58 2.65 0.78 8.36 1.43 8.90 0.72 50 ER14a ExonRegion 1 68.07 37.31 67.57 32.13 51.49 44.80 36.37 34.00 48.60 30.15 42.48 103.02 22.21 77.46 9.83 35.00 20.75 24.36 7.80 12.07 145.17 68.37 100.21 51 E14_Ab KnownBoundary 1 122.91 61.77 45.74 25.90 106.20 63.77 44.38 23.86 31.48 23.58 56.70 72.92 8.28 77.17 28.56 11.71 31.14 16.79 17.41 24.35 155.25 74.34 165.95 52 E14_Ac KnownBoundary 0 117.87 89.66 16.50 16.28 29.03 88.64 40.54 32.45 46.01 22.86 84.07 58.37 20.13 60.04 45.99 61.86 76.30 17.58 27.48 6.20 197.63 98.28 144.61 53 ER14b ExonRegion 1 344.31 174.52 68.71 56.37 159.49 195.17 127.01 68.64 92.50 70.37 284.14 96.49 17.09 304.87 172.00 184.06 233.54 49.63 82.93 41.41 422.48 233.21 286.01 54 E14_Ad KnownBoundary 1 1255.11 471.69 120.63 83.87 414.09 485.63 374.63 112.91 122.94 112.36 763.04 43.81 14.28 675.97 486.81 648.29 583.92 70.76 199.63 83.92 673.93 426.06 393.18 55 ER14c ExonRegion 1 996.09 446.37 150.87 105.62 387.31 538.68 331.32 165.50 174.46 139.21 778.72 111.48 18.17 786.68 522.95 540.18 610.67 86.38 216.60 94.95 836.31 493.01 455.55 56 ER14d ExonRegion 1 1164.15 412.82 186.42 110.57 430.02 569.49 364.57 187.40 205.67 148.42 690.07 77.99 40.78 490.65 352.14 446.94 480.16 105.70 180.41 83.44 649.39 433.52 314.05 57 E14a_E15a KnownJunction 0 596.40 176.02 129.71 66.82 217.40 220.73 207.87 107.33 149.10 78.76 172.73 90.18 53.57 94.24 72.93 137.91 82.19 71.47 78.31 24.93 219.68 142.74 85.45 58 E14a_E15b KnownJunction 0 6.52 2.96 1.24 0.00 3.14 0.00 0.00 0.00 0.00 2.93 2.53 0.00 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E15_Ab NovelBoundary 0 199.52 63.80 66.11 24.61 83.62 70.75 75.08 39.80 79.51 43.06 72.02 52.52 106.81 51.39 27.57 53.23 50.49 21.60 31.25 18.22 119.97 43.29 42.51 60 ER15a ExonRegion 0 463.09 149.47 121.19 59.83 206.57 205.20 167.61 96.45 149.08 85.67 202.37 102.61 107.40 104.59 69.63 143.85 113.22 62.64 77.72 31.06 260.92 126.26 85.16 61 ER15b ExonRegion 1 225.12 71.85 187.07 121.80 220.13 119.69 96.09 184.98 211.99 159.95 697.34 212.33 116.34 413.59 245.17 273.91 539.39 72.80 103.99 78.97 702.39 308.97 272.54 62 E15a_E16a KnownJunction 0 272.34 46.31 240.83 210.73 269.44 136.46 61.87 305.26 296.50 204.96 560.04 188.31 185.86 1135.80 758.02 806.80 535.86 138.62 246.97 134.29 537.59 868.96 559.73 63 E15a_E17a KnownJunction 0 6.37 0.00 18.42 15.15 8.06 2.90 0.00 21.36 8.62 4.06 27.38 12.30 0.00 58.57 31.28 52.38 22.07 7.38 29.55 19.75 19.71 16.96 39.52 64 ER16a ExonRegion 1 176.26 148.87 222.86 143.78 383.72 401.22 272.57 205.17 223.15 176.86 465.31 261.40 134.10 527.25 462.55 491.06 368.23 90.08 167.67 82.73 526.26 429.14 344.36 65 E16a_E17a KnownJunction 1 350.43 399.86 219.45 127.82 390.32 478.82 367.21 171.57 200.08 179.71 564.77 211.87 92.69 453.59 337.60 337.01 413.18 96.63 166.22 89.93 637.67 392.69 237.65 66 ER17a ExonRegion 1 695.20 320.98 241.69 141.62 315.34 306.34 215.29 207.13 233.79 190.53 699.11 265.07 129.74 532.20 389.49 354.09 467.98 110.86 146.85 78.40 750.56 430.90 257.40 67 E17_Da KnownBoundary 0 16.97 0.00 10.20 10.65 0.00 5.45 3.93 7.48 4.75 6.29 13.79 12.15 0.00 5.06 4.45 18.63 0.00 8.71 0.00 5.94 12.23 4.96 20.15 68 E17a_E17b KnownJunction 1 1793.65 404.66 287.42 163.02 584.97 408.80 291.83 231.04 261.74 182.02 865.27 499.96 208.43 683.45 525.37 453.13 660.78 102.22 295.91 81.43 930.86 544.79 312.86 69 E17_Db KnownBoundary 0 14.45 8.95 17.33 4.69 0.00 7.55 6.40 6.61 8.25 4.14 6.48 6.30 8.12 12.01 0.00 0.00 13.00 7.42 4.80 0.00 21.37 8.76 7.60 70 ER17b ExonRegion 0 13.26 6.10 17.81 8.63 0.00 6.97 5.74 9.05 7.45 7.91 8.63 9.24 4.69 6.50 2.32 10.20 7.48 7.95 2.34 2.27 20.71 5.83 15.47 71 ER17c ExonRegion 0 5.64 2.54 8.04 6.28 5.65 6.68 6.78 7.24 7.89 3.91 16.50 2.46 4.12 9.85 2.66 7.44 7.77 7.72 1.87 2.85 27.69 6.87 9.62 72 E17_Dc KnownBoundary 0 0.00 3.03 1.33 4.99 7.81 5.00 6.36 6.24 10.65 5.91 12.42 0.00 6.33 7.06 6.18 15.21 3.74 5.97 0.00 5.31 19.83 5.82 11.78 73 ER17d ExonRegion 0 20.60 4.57 8.50 9.56 19.82 14.64 10.97 11.32 11.81 7.88 11.33 17.23 11.22 6.53 4.58 9.52 8.40 3.49 2.19 2.91 11.82 14.25 9.65 74 E17_Ab KnownBoundary 0 56.23 3.35 14.67 18.81 33.11 44.35 29.06 6.41 6.37 12.54 13.53 19.21 25.65 2.35 9.39 4.36 8.23 0.00 0.00 0.00 7.97 8.63 4.18 75 ER17e ExonRegion 0 546.96 137.09 306.20 164.49 446.90 375.34 270.39 251.89 259.29 217.00 610.87 528.13 375.06 492.54 436.64 330.01 343.69 68.93 134.03 71.46 324.35 498.86 247.40 76 E17_Dd KnownBoundary 0 557.14 248.31 334.35 167.51 702.55 436.62 504.96 318.61 284.55 248.47 579.41 745.89 378.71 398.79 572.35 239.25 259.84 24.08 120.66 61.68 107.06 687.90 164.58 77 ER17f ExonRegion 1 310.34 166.59 293.92 147.99 335.03 208.52 189.13 288.71 216.60 214.98 217.58 656.20 330.83 213.13 323.80 112.13 83.63 12.26 48.57 35.58 42.31 503.74 96.86