Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ORC1L Gene 0 16.58 24.01 47.23 10.73 25.89 16.47 48.70 36.04 20.87 45.34 206.55 101.83 62.63 181.38 134.00 170.55 173.20 38.18 14.92 26.36 4.48 13.46 8.54 2 371568 Transcript 1 0.94 2.30 5.03 3.15 2.38 2.32 17.89 5.31 3.91 10.55 91.73 5.77 5.03 67.24 25.66 30.53 114.08 14.20 5.11 10.02 1.62 4.77 6.89 3 371566 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 6.34 17.43 0.00 0.00 14.60 0.00 16.41 31.60 0.00 0.00 5.69 0.00 0.00 0.00 4 476332 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 1 1.65 2.79 1.68 3.36 8.83 7.44 47.39 1.44 0.12 6.94 42.31 3.80 2.06 80.74 19.20 54.15 54.13 13.06 3.32 8.74 0.03 2.94 7.60 6 E1_Ab KnownBoundary 1 6.37 6.25 2.87 5.46 28.27 10.28 92.96 5.71 2.55 13.00 103.34 6.30 19.48 169.40 43.51 151.16 93.78 30.14 7.91 3.20 0.00 11.33 4.35 7 ER1b ExonRegion 1 10.67 12.88 7.44 5.06 8.12 8.78 45.27 8.43 7.18 16.90 104.55 8.41 6.55 90.85 42.55 118.38 130.30 23.10 4.41 16.55 2.03 4.57 3.62 8 E1a_E2a KnownJunction 1 0.00 3.35 9.55 3.80 0.00 0.00 9.94 8.54 7.78 16.60 146.77 6.30 6.33 91.18 40.67 20.42 186.82 23.42 8.38 14.83 3.15 6.25 11.87 9 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 6.34 17.43 0.00 0.00 14.60 0.00 16.41 31.60 0.00 0.00 5.69 0.00 0.00 0.00 10 ER2a ExonRegion 1 2.12 2.03 8.27 5.45 0.67 1.83 12.91 11.23 7.72 18.64 177.83 12.99 9.38 96.23 41.34 47.55 215.38 18.48 8.76 16.49 2.20 9.90 8.08 11 ER2b ExonRegion 1 1.90 13.37 14.50 12.01 8.61 9.55 15.86 28.07 15.03 33.49 198.08 52.49 18.86 232.45 87.19 218.39 223.43 40.82 8.49 27.62 6.34 16.47 12.05 12 E2a_E3a KnownJunction 0 6.59 15.00 20.73 10.39 35.48 17.83 47.83 39.35 16.32 35.57 118.45 71.87 27.76 130.50 54.89 259.42 133.43 33.25 17.41 26.53 8.28 3.00 12.46 13 ER3a ExonRegion 0 4.63 17.48 19.65 6.43 28.26 22.59 105.24 32.25 29.75 44.08 201.29 90.01 60.31 146.34 77.72 135.16 203.34 35.35 11.10 26.43 4.60 12.37 8.51 14 E3a_E4a KnownJunction 1 6.96 24.80 28.33 17.65 8.66 9.48 74.68 50.85 24.91 50.50 202.89 226.12 147.23 223.32 75.53 172.86 231.32 46.26 4.33 27.23 4.82 19.59 8.19 15 ER4a ExonRegion 0 13.36 26.40 33.70 11.54 15.46 16.62 40.84 33.72 23.89 55.06 244.42 171.00 88.27 214.11 98.11 184.77 244.62 46.45 16.32 29.91 4.04 14.26 4.30 16 E4a_E5a KnownJunction 0 17.04 57.49 57.54 12.59 40.83 41.68 88.86 32.41 20.86 53.83 178.83 213.07 148.53 240.86 91.35 222.42 275.74 46.05 13.55 50.75 6.18 11.02 4.35 17 ER5a ExonRegion 0 12.63 30.82 39.64 12.58 36.03 18.48 59.39 42.45 23.03 54.04 252.33 152.60 90.87 220.69 104.90 206.94 224.08 53.76 20.27 30.99 6.56 12.70 7.76 18 E5a_E6a KnownJunction 1 24.52 51.57 33.62 7.06 32.26 25.04 60.90 42.22 26.94 50.42 228.16 188.01 53.08 232.74 160.46 183.29 183.36 52.07 18.82 30.36 5.44 15.86 0.00 19 ER6a ExonRegion 0 15.48 37.91 64.03 10.49 30.51 12.69 65.74 47.29 27.20 46.80 256.79 153.98 95.61 208.67 118.40 220.78 214.76 41.54 22.96 31.83 3.48 16.33 12.26 20 E6_Da NovelBoundary 0 3.78 2.43 13.99 5.83 28.52 2.10 38.91 18.07 5.64 14.88 25.80 24.01 38.96 13.89 13.35 35.80 25.43 3.81 0.00 0.00 0.00 6.00 0.00 21 E6a_E7a KnownJunction 0 20.74 57.69 131.28 25.37 51.19 11.41 85.28 64.12 14.99 42.28 305.45 159.35 146.91 262.70 156.25 270.61 234.22 61.23 22.31 42.50 3.15 27.25 4.35 22 ER7a ExonRegion 0 17.44 38.70 74.70 13.03 43.12 15.02 67.64 47.80 23.30 41.46 290.25 199.86 120.33 233.66 140.42 279.75 221.38 49.68 33.19 37.75 3.69 30.14 13.23 23 E7a_E8a KnownJunction 0 30.67 36.24 49.05 12.59 70.20 47.87 56.70 51.18 22.19 32.23 174.94 215.62 88.79 192.77 116.69 207.38 144.93 26.61 23.25 13.74 2.78 17.88 11.87 24 ER8a ExonRegion 0 24.69 37.96 50.65 12.27 42.81 36.68 55.17 40.91 23.88 33.64 209.40 212.14 85.98 193.27 99.61 229.84 166.15 27.72 22.30 12.77 0.00 22.22 11.75 25 ER8b ExonRegion 0 21.35 33.42 64.22 10.11 31.11 11.52 63.29 37.06 21.76 54.13 208.96 167.82 101.92 201.52 123.58 169.00 180.40 26.44 10.51 27.26 3.48 15.62 11.76 26 E8a_E9a KnownJunction 0 17.48 52.10 41.13 19.88 43.63 10.73 71.37 27.11 18.84 47.84 193.84 172.86 113.95 159.22 176.28 161.15 222.81 36.52 12.89 8.76 0.00 11.02 7.94 27 E9_Aa NovelBoundary 0 10.30 2.50 13.01 3.40 11.88 5.11 12.76 19.18 4.22 10.58 7.26 38.86 12.34 5.30 14.46 3.85 26.09 5.64 3.95 5.88 0.00 0.00 0.00 28 ER9a ExonRegion 0 15.44 28.20 44.35 7.55 21.46 13.23 44.60 26.23 12.04 46.79 135.80 135.45 78.49 175.55 134.52 146.15 136.85 24.66 6.18 28.88 7.20 14.58 5.96 29 E9a_E10a KnownJunction 0 22.82 39.66 53.22 4.63 30.73 10.51 52.33 46.13 11.92 53.03 184.78 105.93 65.09 191.89 185.67 151.24 142.03 41.49 9.32 49.15 2.84 19.96 12.46 30 ER10a ExonRegion 0 15.67 27.31 55.43 13.43 25.92 11.09 50.75 39.99 28.04 60.32 261.85 121.06 62.81 245.04 198.08 228.24 203.49 40.09 13.96 40.30 5.66 13.34 8.61 31 E10a_E11a KnownJunction 0 15.93 13.42 58.57 20.91 38.20 12.66 51.85 49.49 45.02 67.07 248.27 120.04 64.61 230.86 247.85 220.45 233.10 55.22 18.45 41.99 12.05 20.21 11.44 32 ER11a ExonRegion 0 21.99 25.33 51.67 12.00 20.64 16.60 43.94 40.03 29.41 55.16 259.93 102.20 67.13 212.38 188.95 186.55 192.39 40.56 12.63 28.62 3.07 12.07 6.54 33 E11a_E12a KnownJunction 0 26.75 17.76 35.10 10.02 18.93 12.49 42.09 48.10 19.39 57.16 289.02 107.44 80.84 207.90 227.21 244.04 272.09 23.55 4.42 30.87 2.41 5.57 4.35 34 E11a_E13a NovelJunction 0 7.26 12.50 35.78 5.03 0.00 2.73 9.54 3.98 2.98 3.95 10.32 5.70 0.00 7.18 15.20 3.67 18.42 14.80 0.00 3.26 0.00 0.00 0.00 35 ER12a ExonRegion 0 17.34 11.32 37.57 9.51 23.21 12.00 36.80 43.56 18.15 54.03 240.63 98.42 52.02 182.46 180.25 177.42 185.09 45.82 8.11 21.20 4.43 10.65 3.89 36 E12a_E13a KnownJunction 0 44.30 18.35 23.42 11.25 44.40 5.56 29.15 37.58 11.14 59.18 233.22 54.92 31.98 269.12 230.67 135.52 138.29 35.48 4.24 11.89 8.90 8.57 3.93 37 ER13a ExonRegion 0 22.66 10.70 47.00 13.40 18.32 22.98 42.46 37.51 15.42 57.01 224.15 77.99 64.66 177.55 166.22 151.88 192.24 46.34 7.09 17.26 5.85 13.38 6.91 38 E13a_E14a KnownJunction 0 34.45 17.69 66.20 17.58 16.47 45.60 40.41 37.71 17.48 48.46 202.63 47.87 53.41 134.44 165.28 171.58 147.83 46.34 17.32 22.75 11.43 6.12 7.77 39 ER14a ExonRegion 0 28.55 28.59 58.29 10.10 43.12 24.40 59.63 35.75 15.18 60.09 227.71 77.56 57.50 211.09 160.18 170.21 167.55 56.92 16.82 25.76 4.79 6.37 5.45 40 E14_Da NovelBoundary 0 19.48 14.60 43.17 9.16 37.95 19.36 33.17 29.24 14.41 42.07 178.41 69.62 47.24 113.13 116.57 85.36 156.99 45.02 3.76 10.87 3.03 7.90 0.00 41 E14a_E17b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 E14_Db NovelBoundary 0 13.63 0.00 3.08 0.00 7.56 0.00 2.25 2.55 0.00 9.29 5.37 12.00 0.00 2.47 23.73 11.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E14b_E15a KnownJunction 0 6.30 17.56 71.46 19.15 49.24 36.51 26.32 24.85 17.48 43.06 246.01 77.73 53.57 166.76 131.53 117.15 158.30 39.80 4.80 35.79 0.00 12.37 8.45 44 ER14b ExonRegion 0 12.30 14.74 57.52 16.61 49.00 27.85 28.47 25.39 14.67 47.02 245.60 72.52 50.12 156.32 146.69 127.62 184.64 48.85 5.57 27.66 2.48 12.50 7.16 45 E15_Aa NovelBoundary 0 3.78 0.00 15.37 0.00 0.00 2.90 6.45 5.46 1.22 7.06 4.95 0.00 0.00 2.47 9.15 23.75 9.35 3.65 0.00 6.01 0.00 0.00 0.00 46 ER15a ExonRegion 0 23.99 20.30 77.21 16.65 31.18 22.89 33.15 40.09 21.72 59.00 216.46 59.85 40.53 185.80 203.91 183.71 154.81 51.65 16.53 22.69 0.74 10.39 4.39 47 E15a_E16a KnownJunction 0 25.04 21.18 114.13 18.65 51.61 32.48 58.21 56.35 28.99 60.20 245.43 67.82 49.19 183.88 238.95 208.83 161.10 33.37 31.72 28.83 0.00 20.21 8.54 48 ER16a ExonRegion 1 16.19 20.73 77.48 11.43 35.82 26.97 37.52 42.13 24.17 57.29 186.02 36.21 24.09 183.60 202.30 159.79 126.86 34.62 8.98 27.78 2.40 19.11 7.64 49 E16a_E17a KnownJunction 0 29.41 9.01 90.51 10.26 55.77 31.00 34.98 45.35 20.54 49.75 196.26 74.12 20.45 229.68 223.01 192.94 143.99 30.51 22.49 20.39 0.00 13.35 0.00 50 ER17a ExonRegion 0 24.26 20.75 61.31 10.89 29.19 18.90 36.65 45.68 22.94 35.66 172.94 53.18 28.31 155.83 191.07 141.71 118.27 29.58 17.04 22.25 5.27 17.58 12.97 51 E17_Ab KnownBoundary 1 2210.24 2536.06 6757.77 7074.56 2012.90 1961.82 3108.35 7431.98 6664.14 6303.83 996.73 563.28 524.48 390.31 1086.84 2557.28 1983.35 8176.60 2368.63 2534.12 1329.76 1334.03 2570.11 52 ER17b ExonRegion 0 18.41 18.30 33.56 9.81 17.13 19.22 24.03 23.68 17.56 24.78 115.15 44.40 40.32 98.76 124.19 92.15 75.28 20.50 19.10 24.17 8.32 10.94 10.91 53 E17_Da KnownBoundary 0 14.00 9.14 28.59 6.19 23.85 2.84 46.15 20.29 6.37 21.73 69.70 94.68 81.65 74.93 79.36 47.42 60.31 7.05 0.00 20.52 2.72 2.39 0.00 54 ER17c ExonRegion 0 3.55 5.83 7.68 1.33 8.32 2.33 19.18 3.60 1.27 5.02 28.58 39.67 33.72 39.15 39.36 24.10 24.44 4.14 0.00 6.61 2.20 0.00 0.00 55 ER17d ExonRegion 0 0.00 1.02 0.61 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 2.35 0.81 1.45 0.00 0.00 1.85 0.00 0.00 1.10 0.00 0.00 56 IG14 Intergenic 0 2.69 1.77 3.06 0.41 4.84 1.59 8.15 3.28 2.22 3.20 7.37 7.70 10.71 10.16 10.92 7.56 4.64 0.56 1.06 1.42 0.00 0.56 0.39 57 IG14_SR1 SilentIntergenicRegion 0 2.70 1.77 3.06 0.41 4.84 1.60 8.16 3.28 2.22 3.21 7.38 7.71 10.72 10.17 10.93 7.57 4.65 0.56 1.06 1.43 0.00 0.56 0.39