Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP1-117O3.1 Gene 0 4.75 3.77 6.43 12.76 7.39 6.29 11.46 10.71 8.38 7.06 3.76 8.31 14.46 1.70 6.04 5.95 7.32 5.44 2.90 14.79 2.27 2.02 3.66 2 427524 Transcript 0 1.86 1.47 2.51 4.98 2.88 2.45 4.47 4.18 3.27 2.75 1.47 3.24 5.64 0.66 2.36 2.32 2.85 2.12 1.13 5.77 0.89 0.79 1.43 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 Ix Intron 0 69.88 157.43 68.50 132.13 150.00 168.23 198.11 158.51 100.33 208.91 107.56 209.58 225.33 94.98 76.10 69.73 128.46 37.72 46.54 105.22 35.59 72.61 49.10 6 Ix_AR1 ActiveIntronRegion 0 70.26 158.26 68.87 132.85 150.82 169.17 199.18 159.38 100.88 210.05 108.14 210.70 226.55 95.49 76.52 70.12 129.17 37.92 46.80 105.79 35.78 73.00 49.36 7 Ix Intron 0 34.54 57.78 37.78 60.06 106.47 106.61 129.25 73.19 62.22 115.05 88.43 86.73 103.50 112.99 58.99 64.10 109.17 39.36 46.42 74.72 49.13 38.57 37.66 8 Ix_AR1 ActiveIntronRegion 0 44.02 73.21 51.86 82.43 140.79 132.36 167.05 100.45 85.38 157.91 111.33 94.60 130.44 133.58 70.01 82.64 128.06 52.93 54.14 88.93 59.93 43.75 44.05 9 Ix_AR2 ActiveIntronRegion 0 9.29 16.73 0.00 0.00 14.67 38.27 28.34 0.00 0.00 0.00 27.56 66.90 31.62 58.90 30.04 14.64 59.74 3.02 26.20 37.34 20.57 25.18 20.94 10 Ix Intron 0 15.48 22.75 14.04 28.53 24.68 32.37 36.36 25.13 16.78 18.76 30.95 35.09 40.94 18.60 13.70 25.05 23.80 13.30 6.92 10.49 8.53 10.38 8.87 11 Ix_AR1 ActiveIntronRegion 0 13.87 9.58 13.43 27.40 10.03 19.98 28.29 24.23 18.12 17.35 25.69 29.78 35.90 16.73 15.70 32.86 28.01 16.18 11.91 9.76 10.52 9.31 13.34 12 Ix_SR1 SilentIntronRegion 0 16.48 31.98 12.67 39.11 28.98 39.38 32.48 29.10 17.52 21.89 36.63 37.78 45.38 21.69 14.38 35.67 29.98 18.16 13.72 13.08 12.34 12.67 6.65 13 Ix_SR2 SilentIntronRegion 0 17.02 23.44 15.98 28.17 27.03 34.53 41.34 26.06 17.85 19.42 31.88 35.58 44.28 18.37 13.90 21.99 22.59 12.42 4.78 10.41 7.48 10.52 9.25 14 Ix_AR2 ActiveIntronRegion 0 3.02 11.17 2.99 6.68 16.46 16.33 16.38 9.16 4.72 7.71 17.53 33.45 11.11 16.33 7.35 11.97 12.84 4.23 0.35 5.89 4.50 4.68 4.79 15 Ix Intron 0 6.94 4.49 4.04 9.57 9.02 6.91 16.96 7.98 4.87 5.29 11.80 13.10 13.98 5.03 8.66 10.01 16.38 5.43 3.23 8.25 4.23 3.66 4.52 16 Ix_SR1 SilentIntronRegion 0 7.22 4.48 4.15 9.68 9.01 6.88 17.07 8.00 4.87 5.13 12.12 12.97 14.12 5.04 8.81 10.13 16.71 5.23 3.17 8.00 3.90 3.77 4.34 17 Ix_AR1 ActiveIntronRegion 0 11.52 3.87 2.85 9.65 3.57 1.73 6.50 4.52 0.87 3.13 10.71 5.98 6.78 2.70 4.82 5.50 9.57 7.35 1.51 6.24 6.26 4.64 3.71 18 E2_Aa NovelBoundary 0 0.00 0.00 2.87 6.66 12.99 0.00 4.50 6.70 4.48 0.00 2.32 20.26 6.01 0.00 0.00 4.02 4.77 2.20 0.00 6.07 0.00 0.00 0.00 19 ER2a ExonRegion 0 5.57 4.41 7.53 14.94 8.65 7.36 13.41 12.54 9.81 8.26 4.40 9.73 16.93 1.99 7.07 6.97 8.56 6.37 3.40 17.32 2.66 2.37 4.28