Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DCDC2B Gene 0 4.10 2.28 3.84 6.04 4.09 5.55 6.58 10.33 4.87 7.65 1.05 1.82 1.51 1.38 4.95 3.65 2.79 4.43 3.30 2.90 9.62 2.73 7.77 2 409358 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.60 0.00 0.00 0.00 0.00 0.73 3 487056 Transcript 0 8.21 4.69 7.52 12.65 9.28 12.35 11.83 19.14 9.11 14.09 1.74 3.49 2.37 1.54 9.14 7.07 5.23 8.51 8.05 4.42 19.74 4.67 13.70 4 IG14 Intergenic 0 4.25 2.55 8.26 9.69 11.43 10.60 13.47 16.18 8.79 21.25 1.46 2.94 0.90 5.41 11.10 8.59 4.56 8.53 7.20 7.75 15.49 6.28 22.50 5 IG14_SR1 SilentIntergenicRegion 0 4.27 2.57 8.30 9.74 11.48 10.62 13.54 16.25 8.83 21.36 1.46 2.96 0.91 5.44 11.16 8.63 4.58 8.58 7.24 7.79 15.57 6.31 22.61 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.00 0.00 0.00 2.94 7 ER1b ExonRegion 0 6.57 3.94 3.90 6.30 1.56 2.29 9.50 15.39 7.47 10.92 2.25 2.07 2.30 4.43 10.08 5.76 5.76 6.22 3.09 5.74 10.68 3.64 15.34 8 E1_Da NovelBoundary 0 14.22 18.88 4.88 17.45 24.19 38.56 17.31 13.10 16.38 12.81 0.00 0.00 0.00 14.30 4.45 11.36 4.58 4.89 3.86 12.08 24.65 0.00 22.62 9 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 I1 Intron 0 4.35 4.87 3.33 8.23 14.20 6.38 11.03 12.93 7.45 14.04 0.55 5.94 4.17 2.74 5.00 5.26 4.90 7.03 5.27 6.19 11.19 4.75 12.57 11 I1_SR1 SilentIntronRegion 0 4.36 4.88 3.34 8.24 14.22 6.39 11.05 12.96 7.47 14.07 0.55 5.96 4.18 2.75 5.02 5.27 4.91 7.04 5.28 6.20 11.21 4.76 12.60 12 E2_Aa NovelBoundary 0 5.78 5.92 4.76 7.76 11.54 17.21 30.52 6.61 1.59 5.91 0.00 0.00 6.66 4.89 4.45 7.35 0.00 5.43 7.91 0.00 4.94 0.00 8.37 13 ER2a ExonRegion 0 0.00 0.20 0.00 0.00 0.15 2.79 0.03 0.47 0.12 0.13 0.00 0.00 0.00 1.31 0.06 0.00 0.00 0.00 0.00 2.21 0.00 0.00 0.00 14 E2_Da NovelBoundary 0 2.82 0.00 1.48 0.00 0.00 2.50 1.94 9.28 10.82 8.70 0.00 12.60 0.00 4.71 0.00 4.19 12.90 6.96 11.77 3.26 13.28 5.57 12.55 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I2 Intron 0 4.69 3.80 4.26 4.27 8.43 9.42 7.42 9.02 5.80 9.18 0.45 2.08 1.09 2.51 4.00 5.20 5.78 11.05 7.06 3.24 9.52 1.70 7.20 17 I2_SR1 SilentIntronRegion 0 6.13 4.33 4.32 5.22 10.41 12.61 8.92 10.66 5.51 9.82 0.64 1.18 1.55 2.70 4.97 5.68 8.06 10.52 7.56 2.82 9.12 1.40 8.40 18 I2_AR1 ActiveIntronRegion 0 1.28 2.56 4.20 2.02 3.75 1.82 3.90 5.17 6.59 7.76 0.00 4.30 0.00 2.08 1.71 4.12 0.34 12.48 5.97 4.31 10.62 2.46 4.39 19 ER3a ExonRegion 0 3.11 6.05 1.86 4.34 2.33 3.41 8.29 7.14 1.51 4.04 0.00 2.31 2.56 0.00 2.22 2.51 2.19 3.53 3.64 1.82 7.30 5.03 4.73 20 E3_Da KnownBoundary 0 13.11 3.35 7.66 7.69 7.64 11.53 8.30 15.20 3.44 7.28 0.00 0.00 0.00 0.00 4.45 7.86 0.00 6.26 3.95 2.81 15.63 2.76 12.72 21 E3a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3b ExonRegion 0 7.96 5.52 7.19 13.33 11.12 14.65 12.62 25.47 9.61 13.55 1.40 5.48 3.38 1.64 10.71 10.65 4.08 8.04 14.66 4.66 20.84 4.86 14.78 23 E3_Ab KnownBoundary 0 2.82 0.00 6.95 12.25 11.12 2.21 3.93 32.33 15.83 16.60 4.95 0.00 0.00 2.18 17.80 12.05 13.46 9.70 22.12 6.52 23.60 12.12 16.90 24 ER3c ExonRegion 0 5.59 0.99 5.98 13.60 14.48 13.55 12.35 27.09 13.01 15.85 3.47 3.97 3.01 2.59 7.46 8.92 3.02 10.89 7.34 5.57 19.78 5.69 16.45 25 E3_Db KnownBoundary 0 9.78 2.89 5.74 11.19 33.62 56.22 28.71 18.20 11.57 13.05 7.11 0.00 0.00 2.47 15.45 4.19 0.00 12.31 4.52 8.69 25.39 2.69 29.11 26 E3b_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 0.00 0.00 0.00 0.00 0.00 27 ER3d ExonRegion 0 8.46 3.86 7.85 11.97 7.43 10.05 11.05 12.80 8.61 14.64 2.07 1.50 1.36 1.44 7.58 3.49 6.38 8.97 1.44 4.18 18.64 4.48 12.62 28 E3_Ac KnownBoundary 0 6.67 0.00 5.00 7.09 0.00 0.00 7.29 11.83 1.48 15.71 0.00 6.30 0.00 2.47 4.45 0.00 3.93 8.33 0.00 0.00 2.90 3.12 8.19 29 ER3e ExonRegion 0 4.55 1.38 8.74 5.10 1.87 8.75 9.13 8.54 3.97 11.20 0.00 3.08 2.99 1.49 5.29 3.11 2.35 3.33 1.96 4.37 12.11 3.97 5.91 30 E3_Dc NovelBoundary 0 0.00 0.00 5.12 7.99 0.00 7.04 7.64 8.54 4.48 16.09 0.00 0.00 12.66 2.12 6.18 20.42 8.51 3.94 4.42 2.94 11.12 2.94 3.41 31 E3c_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E4_Aa NovelBoundary 0 3.11 0.00 7.04 6.23 3.65 8.12 6.32 7.19 8.71 8.76 2.05 0.00 0.00 5.47 4.45 4.36 0.00 4.02 0.00 0.00 11.68 2.63 24.07 33 ER4a ExonRegion 0 0.05 0.15 0.00 0.00 0.00 0.00 0.00 0.00 0.19 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.22 34 E4_Da NovelBoundary 0 0.00 0.00 6.65 5.36 3.82 0.00 14.26 13.02 4.48 9.11 0.00 6.30 6.82 2.41 10.75 0.00 8.23 10.86 4.80 3.13 9.45 4.84 4.35 35 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 I4_AR1 ActiveIntronRegion 0 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.54 37 E5_Aa NovelBoundary 0 30.52 2.89 6.39 40.25 11.29 19.48 18.24 49.70 28.39 61.14 14.69 31.66 88.47 23.90 59.34 35.20 30.95 36.98 4.05 25.63 34.66 11.14 113.70 38 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.79 0.00 0.50 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E5_Da NovelBoundary 0 44.38 9.21 12.77 26.64 26.91 24.53 19.34 31.79 25.29 49.40 4.74 30.76 19.48 35.20 39.93 19.48 8.60 16.42 9.41 7.54 54.80 31.41 77.51 40 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E6_Aa NovelBoundary 0 21.56 9.47 6.53 9.59 13.07 4.94 8.57 28.42 15.45 29.06 2.58 20.26 6.82 31.90 31.89 27.86 8.98 2.57 17.88 8.76 19.46 16.59 35.60 42 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.28 0.00 0.00 0.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E6_Da NovelBoundary 0 12.67 2.43 5.62 27.54 14.35 11.92 8.13 11.42 8.33 21.81 6.84 11.40 12.66 9.12 5.19 16.15 4.68 13.02 3.58 5.56 22.18 13.96 18.44 44 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E7_Aa NovelBoundary 0 19.93 2.96 3.67 5.73 16.04 17.94 9.01 12.49 0.00 15.55 0.00 0.00 0.00 2.47 0.00 11.19 8.70 9.33 4.80 3.26 15.75 6.25 8.02 46 ER7a ExonRegion 0 0.00 0.00 0.00 0.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER7b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00