Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C1orf113 Gene 0 5.42 2.02 7.97 5.50 4.74 15.51 5.60 12.25 17.63 12.36 11.26 5.92 4.39 12.15 6.61 9.61 5.13 5.04 4.04 3.28 9.62 8.28 17.32 2 373139 Transcript 0 1.00 0.00 1.11 0.00 1.39 3.28 1.53 2.24 5.08 1.30 0.81 0.00 0.00 0.84 4.37 0.00 0.44 0.00 0.00 0.00 0.80 0.24 1.50 3 480549 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 312808 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 453908 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 426732 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 496636 Transcript 0 1.84 0.00 0.57 2.14 0.07 3.35 0.06 2.03 4.24 0.22 2.05 0.23 0.21 1.84 0.15 1.54 0.17 0.08 0.08 0.67 0.19 0.13 0.23 8 474766 Transcript 0 0.52 0.10 1.37 1.08 0.46 2.60 0.77 1.76 4.16 1.62 1.08 0.07 0.31 1.69 0.38 0.77 0.65 1.01 1.03 0.69 2.45 1.79 4.04 9 ER1a ExonRegion 0 0.67 0.00 0.00 0.00 0.00 0.00 0.98 0.00 0.68 0.00 0.00 0.00 0.00 0.00 3.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E1a_E2a KnownJunction 0 3.19 0.00 1.83 0.00 0.00 2.38 5.65 7.15 6.68 1.67 0.00 0.00 0.00 0.00 8.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.33 11 ER2a ExonRegion 0 0.56 0.00 0.59 0.00 0.86 0.00 1.47 0.30 1.45 1.43 0.00 0.00 0.00 0.80 1.84 0.00 0.00 0.00 0.00 0.00 0.71 1.27 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.38 3.30 2.79 0.00 0.00 0.00 0.00 8.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER3a ExonRegion 0 1.59 0.00 0.67 0.00 3.68 4.01 1.06 1.40 7.76 1.90 2.90 0.00 0.00 1.78 3.35 0.00 2.63 0.00 0.00 0.00 1.24 0.20 1.51 14 E3a_E4c KnownJunction 0 0.00 0.00 3.55 0.00 3.82 13.29 0.00 2.22 10.62 0.00 1.95 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 2.84 0.00 4.18 15 E4_Ab NovelBoundary 0 3.04 0.00 1.54 1.66 0.00 22.71 10.60 0.00 1.79 1.24 4.63 6.00 0.00 4.47 0.00 0.00 3.65 2.07 0.00 0.00 3.03 0.00 7.34 16 ER4a ExonRegion 0 6.00 0.34 0.51 0.00 0.00 10.54 1.32 0.00 2.06 0.29 2.26 3.61 0.00 3.52 0.97 0.00 4.40 0.00 0.00 1.42 0.00 1.22 1.96 17 ER4b ExonRegion 0 26.38 2.03 3.74 1.33 3.16 41.28 2.27 0.04 5.07 2.18 10.11 3.55 0.00 14.53 11.01 5.79 9.14 1.71 0.16 6.60 0.06 9.24 18.60 18 E4_Ac KnownBoundary 0 43.42 2.76 6.62 2.06 7.89 52.58 2.25 0.00 9.81 3.33 15.21 0.00 0.00 12.54 15.95 18.88 8.23 2.36 0.00 11.12 0.00 13.96 31.16 19 ER4c ExonRegion 0 7.14 1.05 7.60 0.75 2.74 16.05 2.86 6.65 16.40 8.59 9.09 4.73 6.44 9.32 5.61 8.16 3.50 4.18 1.35 3.55 5.43 4.27 12.64 20 E4a_E5a KnownJunction 0 0.00 0.00 13.19 1.93 0.00 10.33 6.98 6.78 25.40 11.85 30.85 12.60 19.80 7.36 4.45 15.12 8.60 5.97 0.00 9.27 3.15 2.76 16.73 21 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER5a ExonRegion 0 2.35 2.88 11.00 6.01 3.12 3.73 3.40 8.17 17.02 16.52 28.44 7.85 6.75 20.88 17.06 10.42 12.33 6.98 15.68 5.92 10.05 10.72 27.33 23 E5a_E6a KnownJunction 0 0.00 3.03 6.74 3.23 4.16 2.33 0.00 12.53 15.16 16.06 11.90 0.00 13.64 9.65 18.30 0.00 4.77 1.78 0.00 6.07 5.68 3.12 20.40 24 E6_Aa NovelBoundary 0 9.93 0.00 3.08 0.00 0.00 5.17 2.25 2.30 10.76 3.73 0.00 6.30 6.82 2.47 4.45 14.27 4.77 4.19 4.52 2.94 7.91 0.00 11.61 25 ER6a ExonRegion 0 8.43 4.58 5.54 3.58 4.97 14.64 3.36 14.94 19.96 15.87 14.36 8.97 9.21 14.04 12.43 10.83 1.36 7.19 2.33 5.21 12.28 1.15 9.23 26 E6a_E7a KnownJunction 0 10.15 0.00 4.82 3.16 8.40 35.21 6.36 8.95 21.87 14.08 15.90 5.85 19.97 25.31 20.64 14.87 0.00 6.92 4.80 9.27 5.93 0.00 11.44 27 E6a_E9a KnownJunction 0 0.00 0.00 1.45 1.63 0.00 10.90 1.68 11.25 1.39 4.24 0.00 6.30 0.00 2.47 0.00 10.34 0.00 2.11 0.00 0.00 3.03 0.00 4.18 28 ER7a ExonRegion 0 6.86 0.00 1.68 0.47 10.70 21.33 4.66 6.54 14.85 9.50 16.26 10.54 6.93 19.03 11.23 8.79 2.30 3.98 4.71 2.50 5.22 1.63 10.02 29 E7_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 5.28 4.02 7.39 7.93 6.10 0.00 6.15 0.00 9.42 4.45 0.00 3.55 1.87 0.00 2.94 0.00 0.00 11.10 30 E7a_E8a KnownJunction 0 9.26 0.00 1.15 0.00 6.28 10.16 0.00 5.09 7.55 5.72 14.64 5.85 0.00 9.30 0.00 4.36 4.68 3.81 9.41 0.00 11.43 5.76 7.94 31 E7a_E9a NovelJunction 0 0.00 0.00 5.17 3.96 0.00 0.00 4.11 6.65 9.55 1.67 7.95 0.00 0.00 2.24 0.00 0.00 12.34 1.58 0.00 0.00 2.84 2.69 0.00 32 E8_Aa NovelBoundary 0 17.63 0.00 0.00 1.40 4.16 14.14 2.25 1.81 5.67 0.00 4.69 0.00 0.00 9.95 0.00 3.85 4.39 0.00 0.00 2.88 2.59 0.00 7.85 33 ER8a ExonRegion 0 7.56 2.56 5.31 4.02 5.46 10.91 2.04 8.11 17.25 6.86 20.36 11.53 8.82 13.65 9.85 6.47 5.36 4.23 1.70 1.79 8.60 6.29 13.32 34 E8a_E9a KnownJunction 0 13.19 3.35 8.31 6.06 3.65 0.00 4.33 8.34 15.97 8.52 21.90 31.51 8.28 16.60 10.51 8.20 4.21 7.38 0.00 3.07 5.13 2.76 25.44 35 E9_Aa NovelBoundary 0 2.82 0.00 3.93 0.00 7.39 2.21 0.00 2.55 8.45 1.18 11.90 0.00 0.00 2.12 0.00 11.36 0.00 3.81 4.24 0.00 0.00 0.00 3.93 36 ER9a ExonRegion 0 24.94 2.99 17.55 7.77 3.94 39.35 6.04 25.57 34.88 22.09 46.57 25.78 13.53 27.48 13.27 29.24 9.33 13.74 8.16 9.61 10.31 8.31 39.53 37 E9a_E10a KnownJunction 0 2.89 0.00 0.00 3.43 0.00 6.93 0.00 3.74 7.90 0.00 2.68 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 E9a_E10b KnownJunction 0 23.63 0.00 10.32 3.80 12.31 13.23 4.06 24.85 29.72 22.59 26.43 18.61 25.65 17.54 13.60 12.73 18.23 8.12 12.99 5.62 18.53 8.57 29.88 39 ER10a ExonRegion 0 2.62 0.00 1.71 2.98 0.21 3.14 0.17 2.37 4.81 0.66 3.46 0.68 0.62 3.12 0.46 4.61 0.52 0.24 0.25 2.02 0.58 0.38 0.70 40 E10_Ab KnownBoundary 0 2.74 0.00 5.50 3.26 0.00 2.78 0.00 2.14 4.63 0.00 2.68 0.00 0.00 0.00 0.00 8.72 0.00 0.00 0.00 3.20 0.00 0.00 0.00 41 ER10b ExonRegion 0 15.37 0.00 15.40 15.02 7.90 18.99 15.64 31.36 30.17 28.24 32.49 19.07 32.27 27.65 17.75 24.27 25.39 11.83 2.58 6.28 18.36 15.33 34.61 42 E10a_E11a KnownJunction 0 13.04 0.00 23.30 21.21 3.65 26.01 17.36 34.34 31.02 28.18 38.64 29.26 33.93 24.02 24.97 36.74 25.43 12.27 0.00 5.82 10.26 24.68 59.50 43 ER10c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER11a ExonRegion 0 8.65 1.10 21.34 12.02 13.15 17.81 7.97 21.88 22.76 27.22 39.95 19.76 23.35 24.03 14.35 38.16 13.84 6.27 8.54 4.89 11.63 13.52 42.83 45 E11_Da NovelBoundary 0 0.00 0.00 4.94 0.00 0.00 0.00 1.81 2.01 6.19 7.66 2.26 5.55 0.00 2.41 15.58 8.03 3.65 0.00 0.00 2.75 2.84 0.00 4.10 46 E11a_E12a KnownJunction 0 6.59 0.00 11.32 11.42 20.88 4.88 3.71 14.83 9.40 18.40 22.90 49.52 6.49 16.25 14.22 38.28 16.27 1.95 29.84 2.75 14.21 11.51 35.08 47 E11a_E14a KnownJunction 0 0.00 0.00 5.23 0.00 0.00 5.79 0.00 6.61 6.63 4.32 0.00 0.00 0.00 0.00 4.45 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E12_Aa NovelBoundary 0 3.70 0.00 3.16 0.00 0.00 0.00 1.77 2.09 7.93 1.56 0.00 0.00 0.00 4.47 0.00 8.54 3.93 4.97 0.00 0.00 0.00 2.33 11.61 49 ER12a ExonRegion 0 6.43 1.38 7.40 6.43 8.94 6.33 5.55 12.00 12.40 11.14 21.52 36.51 22.48 15.23 10.46 26.69 19.12 0.07 15.15 4.86 9.85 12.38 26.71 50 E12_Da NovelBoundary 0 0.00 0.00 4.61 0.00 0.00 2.50 0.00 3.94 4.95 5.00 4.42 0.00 0.00 9.42 4.70 4.36 4.77 0.00 0.00 4.86 0.00 0.00 0.00 51 E12a_E13a KnownJunction 0 9.26 6.45 4.52 1.96 3.90 15.22 5.17 12.98 13.48 4.54 21.90 24.01 14.77 7.53 9.64 3.67 0.00 0.00 0.00 2.56 0.00 5.02 26.38 52 ER13a ExonRegion 0 6.97 2.87 9.78 3.67 3.32 20.17 6.15 11.74 16.56 9.13 21.34 7.75 13.97 24.17 11.24 20.34 7.82 2.49 7.78 3.27 10.46 9.50 25.66 53 E13_Da NovelBoundary 0 0.00 0.00 3.22 1.93 0.00 5.68 2.21 1.97 4.77 0.00 0.00 0.00 0.00 2.47 4.45 0.00 0.00 2.07 0.00 0.00 0.00 0.00 12.38 54 E13a_E14a KnownJunction 0 10.82 2.83 9.70 10.35 6.96 8.23 10.64 16.18 17.68 7.01 8.00 6.30 32.14 16.54 13.35 20.08 21.51 0.00 4.80 0.00 9.20 2.82 8.37 55 ER14a ExonRegion 0 12.22 4.58 16.21 9.93 7.59 28.40 13.13 27.26 30.21 25.24 20.07 16.90 17.12 20.22 16.91 25.23 6.57 4.97 8.08 5.22 12.99 20.68 41.61 56 E14_Da KnownBoundary 0 10.52 2.83 12.45 7.86 4.33 25.27 12.41 23.33 38.89 37.79 17.43 12.60 0.00 22.66 14.09 38.20 0.00 13.18 13.55 2.94 17.92 17.45 58.90 57 ER14b ExonRegion 0 16.62 3.63 13.13 10.28 5.67 32.92 12.13 25.66 37.77 37.26 26.24 18.69 5.38 22.20 11.16 20.00 10.51 11.03 11.98 8.10 13.79 19.10 27.82 58 E14_Ab KnownBoundary 0 12.45 2.89 17.80 11.89 4.33 46.05 14.44 17.17 59.49 36.02 13.58 12.30 12.99 10.77 8.90 42.72 8.51 17.91 16.09 8.69 13.59 33.07 43.02 59 ER14c ExonRegion 0 7.90 4.12 13.08 11.11 8.04 33.68 9.39 25.58 36.53 23.32 16.53 7.69 5.83 21.69 10.63 19.59 10.83 8.55 5.39 4.17 12.54 13.67 31.24 60 E14b_E15a KnownJunction 0 0.00 3.03 1.39 5.79 7.81 28.39 1.63 23.41 23.76 9.99 9.11 6.75 0.00 5.06 0.00 3.42 0.00 4.19 4.24 2.81 9.27 5.20 18.78 61 ER15a ExonRegion 0 3.70 4.23 9.69 10.50 2.88 13.35 3.83 15.61 13.55 7.42 9.51 3.25 0.00 18.50 4.90 8.96 0.00 3.41 0.70 2.89 9.92 4.07 10.28 62 E15a_E16a KnownJunction 0 17.56 0.00 18.45 14.35 4.33 15.39 9.32 11.99 16.38 8.65 16.95 5.85 0.00 7.95 0.00 3.85 0.00 1.53 0.00 0.00 0.00 2.27 0.00 63 ER16a ExonRegion 0 5.24 0.67 6.92 3.33 3.93 11.38 7.57 10.44 12.17 7.12 10.87 2.59 1.28 9.71 4.88 7.18 3.17 4.02 0.27 0.00 6.64 4.99 8.56 64 E16_Da KnownBoundary 0 3.56 0.00 8.25 2.03 3.65 16.18 12.50 3.70 9.40 1.67 7.37 0.00 0.00 14.48 6.30 3.50 0.00 6.18 4.14 0.00 5.68 5.27 8.71 65 E16a_E16b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.59 0.00 0.00 0.00 0.00 4.71 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 66 ER16b ExonRegion 0 1.33 0.08 5.38 2.86 1.62 8.14 2.75 6.55 13.51 7.12 4.94 0.35 0.38 6.43 1.90 2.20 3.26 5.03 3.24 1.66 11.13 6.45 12.66 67 E16_Ab KnownBoundary 0 0.00 3.35 2.78 8.99 8.57 21.86 1.90 12.08 12.90 6.53 13.42 0.00 0.00 19.01 0.00 7.52 9.44 3.86 4.80 2.30 25.14 3.12 31.93 68 ER16c ExonRegion 0 0.00 1.13 1.50 5.68 4.36 8.22 0.29 3.97 11.76 2.51 9.59 0.00 3.56 15.10 0.00 2.59 3.55 0.99 1.42 1.02 18.49 2.97 15.66 69 E16_Db NovelBoundary 0 3.70 0.00 5.50 0.00 3.82 2.90 4.37 10.84 14.55 7.12 4.79 0.00 0.00 11.60 4.45 4.10 0.00 7.17 0.00 0.00 11.86 3.00 19.97 70 E16b_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 E16b_E17b KnownJunction 0 0.00 0.00 0.00 5.13 3.31 0.00 0.00 0.00 7.70 1.10 2.68 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 3.26 5.99 0.00 0.00 72 I16 Intron 0 0.43 0.41 5.17 4.52 3.25 5.57 2.41 7.30 5.59 3.11 3.52 0.00 0.00 6.34 2.07 2.41 1.34 4.27 0.64 0.86 8.92 5.90 10.70 73 I16_AR1 ActiveIntronRegion 0 0.43 0.41 5.22 4.56 3.28 5.61 2.43 7.35 5.63 3.14 3.55 0.00 0.00 6.39 2.09 2.43 1.35 4.31 0.65 0.87 8.99 5.95 10.78 74 E17_Aa NovelBoundary 0 0.00 0.00 77.05 21.54 7.05 4.71 8.04 38.53 19.79 27.64 4.74 0.00 0.00 4.83 4.45 7.78 0.00 2.07 0.00 0.00 271.20 135.69 125.14 75 E17_Ab NovelBoundary 0 16.23 0.00 56.62 17.15 3.40 8.12 1.94 27.85 15.10 23.69 0.00 0.00 0.00 12.18 0.00 8.12 25.90 1.58 0.00 0.00 279.05 197.66 177.90 76 ER17a ExonRegion 0 0.00 0.00 0.00 1.02 0.67 0.00 0.00 1.73 3.40 0.00 0.48 0.00 1.17 1.22 0.00 0.74 0.00 0.00 0.00 0.53 1.10 0.00 0.73 77 ER17b ExonRegion 0 0.86 0.00 0.00 0.39 0.52 0.63 0.23 0.02 1.21 0.11 0.18 0.00 0.00 0.03 0.00 0.29 0.00 0.00 0.00 0.57 1.47 0.36 0.50 78 E17_Da NovelBoundary 0 33.86 3.35 82.05 24.07 15.28 40.15 0.00 39.72 25.03 44.27 10.21 0.00 6.82 18.95 17.55 0.00 4.21 0.00 8.94 0.00 581.02 333.60 302.27 79 E17a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 80 E17a_E18b KnownJunction 0 3.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81 ER18a ExonRegion 0 1.27 0.43 1.47 1.51 0.00 4.84 1.08 0.53 2.20 0.97 0.00 0.00 0.00 0.80 0.00 0.89 0.00 0.00 1.90 1.26 0.00 2.49 6.78 82 E18_Da NovelBoundary 0 0.00 0.00 3.64 4.00 0.00 29.07 4.33 4.35 2.81 9.35 0.00 5.40 0.00 2.47 0.00 3.25 0.00 4.64 0.00 2.88 5.62 0.00 0.00 83 ER18b ExonRegion 0 2.12 1.22 1.13 2.13 0.64 15.18 2.91 4.70 0.35 3.95 0.00 1.39 0.00 0.00 3.60 0.83 0.00 0.00 0.00 0.51 0.00 0.83 1.53 84 ER18c ExonRegion 0 1.90 2.37 7.61 4.85 6.08 8.87 6.12 8.93 11.03 8.22 3.44 2.13 0.86 7.65 4.51 2.62 1.28 4.90 2.83 3.65 12.85 7.96 12.07 85 ER18d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00